DY260252

Overview
NameDY260252
Unique NameDY260252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1055
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_PYRAB (Aspartate aminotransferase OS=Pyrococcus abyssi GN=aspC PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.790e-39
Identity = 79/213 (37.09%), Postives = 129/213 (60.56%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I+LG G P+FD P  +K+ A +A+  G   Y    G+PE   AIA + KK + +E DP KE+ V  G  +A    +   +  G+EV++  P + SY   + +AG K ++  T    EF + ++ELK  +++ T+A+++N+P NPTG +  +++L  IA   +E+D++V SDEVY+   + ++ H SIAS  GM+E T+ +N   KTF +TGW+
Sbjct:   29 ISLGIGEPDFDTPQHIKEYAKEALDMGLTHYGPNIGLPELREAIAEKLKKQNNIEADPNKEIMVLVGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEENEFRLNVDELKKYVTEKTKALIINSPCNPTGSVLKKKDLEEIADFAVEHDLIVISDEVYEHFIYDDVKHYSIASLDGMFERTITVNGFSKTFAMTGWR 241          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: BNA3_YEAST (Probable kynurenine--oxoglutarate transaminase BNA3 OS=Saccharomyces cerevisiae GN=BNA3 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.647e-37
Identity = 82/224 (36.61%), Postives = 130/224 (58.04%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDF-VKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPP-----------EFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            INLGQGF ++  P F +K+A         NQY+   G P   +++   +      E+  E  VTVT+G  E I + ++GL+N GDEVI+F PF+D Y   + + G K+  + + PP           E+ I  E+ +  I+  T+A+++NTPHNP GK+FTREEL  + ++C++++V++ SDEVY+ L F      IA+  P + + T+ + S GK+F  TGW+
Sbjct:   57 INLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAEN-VTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWR 279          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_THET8 (Aspartate aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=aspC PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.225e-36
Identity = 79/214 (36.92%), Postives = 130/214 (60.75%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIPI-EELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEP--TVPMNSLGKTFPLTGWK 858
            + L  G P+FD P+ VK+AA +A+  GK +YA   G+PE   A+A +F++++GL V PE E  VT G  +A+      +++PGDEVI+ +P++ SY   +  AG  +  +   P E  +P  E ++  I+  T+A+++N+P+NPTG ++ +E L  +A L +E+D  + SDE+Y+ L +E +H S    PG   P  T+ +N   K F +TGW+
Sbjct:   34 VALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWR 242          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT1_BACSU (Aspartate aminotransferase OS=Bacillus subtilis GN=aspB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.225e-36
Identity = 79/220 (35.91%), Postives = 133/220 (60.45%), Query Frame = 1
Query:  208 AIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCIT-LRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            A  H  I LG G P+F+ P  + DAA++++ +G  +Y    G+ E  ++IA +FK+D  +E  P  ++ V +G   A+      +++  DEVI+  P++ SY   + +AG K   +  L    F I  E+LK+ I++ T+AI++N+P NPTG M+T EEL+ +  +C+E+D+L+ SDE+Y+KL +    H+SIA     + E TV +N + K+  +TGW+
Sbjct:   27 AAGHDVIGLGAGEPDFNTPQHIIDAAVRSMNEGHTKYTPSGGLAELKNSIAEKFKRDQNIEYKPS-QIIVCTGAKHALYTLFQVILDEEDEVIIPTPYWVSYPEQVKLAGGKPVYVEGLEENHFKISPEQLKNAITEKTKAIVINSPSNPTGVMYTEEELSALGEVCLEHDILIVSDEIYEKLTYGGKKHVSIAQLSDRLKEQTVIINGVSKSHSMTGWR 245          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: YDT4_SCHPO (Uncharacterized aminotransferase C6B12.04c OS=Schizosaccharomyces pombe GN=SPAC6B12.04c PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.906e-36
Identity = 81/224 (36.16%), Postives = 135/224 (60.27%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-----------FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            ++L QGF N++ P FV DAA ++I +   NQY+   G P    A++  +       ++P+ E+ VT+G  E   +     +NPGDEVI+  PF+D Y + ++M G     + + PPE           + + + +L++ I++ T+ I++NTPHNP GK+F+ EELN IA L +++++LV SDEVYD+L+F +  + +A+  P +++  V + S GKTF  TGW+
Sbjct:   35 VSLSQGFFNYNPPKFVLDAAKKSIDEVACNQYSHTRGRPSLRKALSEAYSPYFKRTLNPDTEIVVTAGANEGFFSVFAAFLNPGDEVIVMEPFFDQYISNITMNGGVPVYVPIIPPEEGSVKPVSAGAWKLDMNKLRNAITEKTKMIVINTPHNPLGKIFSEEELNEIADLVLKHNLLVVSDEVYDRLSF-VPFVRLATLRPELFKHVVTVGSGGKTFGCTGWR 257          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT1_METJA (Probable aspartate aminotransferase 1 OS=Methanocaldococcus jannaschii GN=MJ0001 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.442e-35
Identity = 78/211 (36.97%), Postives = 130/211 (61.61%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            INLG G P+FD P  + +AA +A+ +GK  Y+  +G+PE    I+++ K D  L+VD +  + VT G +EA+  +I+ LI+ GDEV++  P + SY +    A  KIK I L    F I +E++K +I+K T+ I+ N+P NPTGK++ +E +  +A +  + ++++ SDEVYDK+ ++  H    SP    +  + +N   KT+ +TGW+
Sbjct:   26 INLGIGEPDFDTPKHIIEAAKRALDEGKTHYSPNNGIPELREEISNKLKDDYNLDVDKDN-IIVTCGASEALMLSIMTLIDRGDEVLIPNPSFVSYFSLTEFAEGKIKNIDL-DENFNIDLEKVKESITKKTKLIIFNSPSNPTGKVYDKETIKGLAEIAEDYNLIIVSDEVYDKIIYDKKHY---SPMQFTDRCILINGFSKTYAMTGWR 231          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_THEAQ (Aspartate aminotransferase OS=Thermus aquaticus GN=aspC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 4.196e-35
Identity = 78/214 (36.45%), Postives = 127/214 (59.35%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEP--TVPMNSLGKTFPLTGWK 858
            + L  G P+FD P+ VK+A  +A+  GK +YA   G+PE   A+A +F++++GLEV PE E  VT G  +A+      +++PGDEVI+ AP++ SY   +  A G  ++  TL    F    E ++  I+  T+A+++N+P+NPTG ++  E L  +A + +++D  + SDE+Y+ L +E  H S    PG   P  T+ +N   K F +TGW+
Sbjct:   34 VALTAGEPDFDTPEHVKEAGRRALAQGKTKYAPPAGIPELREAVAEKFRRENGLEVTPE-ETIVTVGGKQALFNLFQAILDPGDEVIVLAPYWVSYPEMVRFAGGVPVEVPTLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGVVYPEEVLRALAEMALQHDFYLVSDEIYEHLIYEGAHFS----PGTLAPEHTITVNGAAKAFAMTGWR 242          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_BACST (Aspartate aminotransferase OS=Bacillus stearothermophilus GN=aspC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 5.480e-35
Identity = 85/245 (34.69%), Postives = 132/245 (53.88%), Query Frame = 1
Query:  133 NLQPQQVAKCLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGA-KIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            +L P       EK K        + A  H  I LG G P+F+ P  + DAAI+A+ +G  +Y    G+P     I  +F +D GL+ +P  EV V  G   A+      L++ GDEVI+  P++ SY   + +AG   +    L    F I  E+LK  I+  T+A+++N+P NPTG ++T EEL  +  +C+ + VL+ SDE+Y+KL +    H+SIA   P +   TV +N + K+  +TGW+
Sbjct:    9 SLTPSATLAITEKAK-------ELKAAGHDVIGLGAGEPDFNTPQHILDAAIKAMNEGHTKYTPSGGLPALKEEIIKKFARDQGLDYEPA-EVIVCVGAKHALYTLFQVLLDEGDEVIIPTPYWVSYPEQVKLAGGVPVYVEGLEQNHFKITPEQLKQAITPRTKAVIINSPSNPTGMIYTAEELKALGEVCLAHGVLIVSDEIYEKLTYGGAKHVSIAELSPELKAQTVIINGVSKSHSMTGWR 245          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_BACY2 (Aspartate aminotransferase OS=Bacillus sp. (strain YM-2) PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.763e-33
Identity = 77/214 (35.98%), Postives = 125/214 (58.41%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+F+ P  + DAAI +++ G  +Y    G+P    AI  +FK+D+ LE  P  E+ V  G    +      ++N GDEVI+  P++ SY   + +AG     I     + + I  E+LK+ I+  T+A+++N+P NPTG ++TREEL  IA + +EN++L+ SDE+Y+KL +   +H SIA     +   T+ +N + K+  +TGW+
Sbjct:   35 IGLGAGEPDFNTPQNIMDAAIDSMQQGYTKYTPSGGLPALKQAIIEKFKRDNQLEYKPN-EIIVGVGAKHVLYTLFQVILNEGDEVIIPIPYWVSYPEQVKLAGGVPVYIEATSEQNYKITAEQLKNAITDKTKAVIINSPSNPTGMVYTREELEDIAKIALENNILIVSDEIYEKLLYNGAEHFSIAQISEEVKAQTIVINGVSKSHSMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_AQUAE (Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.303e-33
Identity = 71/214 (33.18%), Postives = 127/214 (59.35%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY-EATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            I  G G P+FD PDF+K+A I+A+R+GK +YA   G+PE   AIA +  K++ +E  P  E+ V++G    +    + +++ GDEV+L +P++ +Y E      G  ++    +   F + +E++K  +++ T+AI++N+P+NPTG ++  EEL  IA  C+E  + + SDE Y+   + +   +S AS    +   T  +N+  K++ +TGW+
Sbjct:   35 IGFGAGEPDFDTPDFIKEACIRALREGKTKYAPSAGIPELREAIAEKLLKENKVEYKP-SEIVVSAGAKMVLFLIFMAILDEGDEVLLPSPYWVTYPEQIRFFGGVPVEVPLKKEKGFQLSLEDVKEKVTERTKAIVINSPNNPTGAVYEEEELKKIAEFCVERGIFIISDECYEYFVYGDAKFVSPASFSDEVKNITFTVNAFSKSYSMTGWR 247          
The following BLAST results are available for this feature:
BLAST of DY260252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
AAT_PYRAB4.790e-3937.09Aspartate aminotransferase OS=Pyrococcus abyssi GN... [more]
BNA3_YEAST7.647e-3736.61Probable kynurenine--oxoglutarate transaminase BNA... [more]
AAT_THET82.225e-3636.92Aspartate aminotransferase OS=Thermus thermophilus... [more]
AAT1_BACSU2.225e-3635.91Aspartate aminotransferase OS=Bacillus subtilis GN... [more]
YDT4_SCHPO2.906e-3636.16Uncharacterized aminotransferase C6B12.04c OS=Schi... [more]
AAT1_METJA1.442e-3536.97Probable aspartate aminotransferase 1 OS=Methanoca... [more]
AAT_THEAQ4.196e-3536.45Aspartate aminotransferase OS=Thermus aquaticus GN... [more]
AAT_BACST5.480e-3534.69Aspartate aminotransferase OS=Bacillus stearotherm... [more]
AAT_BACY21.763e-3335.98Aspartate aminotransferase OS=Bacillus sp. (strain... [more]
AAT_AQUAE2.303e-3333.18Aspartate aminotransferase OS=Aquifex aeolicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260252 ID=DY260252; Name=DY260252; organism=Citrus clementina; type=EST; length=1055bp
CATACAATAAGCATTACTGATTCTGTCAACACCAGAAGAAGAGGAATCAG
TACCGCTTGCCCTAGGTACCCTTCTCTCATGGCGAGCTTGTCCACCGTTT
CCACCAATCAAAGCGACACCATCCACAAGACCAATCTTCAGCCTCAACAG
GTTGCTAAGTGCTTGGAGAAGTTTAAAACTACAATCTTTACACAAATGAG
TATGCTTGCCATCAAACATGGAGCTATAAATCTTGGTCAAGGCTTTCCCA
ACTTCGATGGCCCAGATTTTGTTAAAGATGCAGCGATTCAAGCCATAAGG
GATGGGAAGAATCAATATGCTCGTGGACATGGGGTTCCAGAGTTCAACTC
TGCCATTGCTTCCCGGTTTAAGAAAGATTCTGGGCTCGAGGTTGACCCTG
AAAAGGAAGTTACTGTTACCTCTGGGTGCACCGAAGCCATTGCTGCAACC
ATCTTAGGTTTGATTAATCCTGGAGATGAGGTGATCCTTTTTGCACCTTT
CTATGATTCCTATGAAGCTACTCTCTCCATGGCTGGTGCTAAAATTAAAT
GCATCACATTGCGCCCTCCAGAATTTGCCATCCCCATTGAAGAGCTCAAG
TCTACAATCTCAAAAAATACTCGTGCAATTCTTATGAACACTCCACATAA
CCCCACTGGAAAGATGTTCACTAGGGAGGAACTTAATGTTATTGCATCTC
TTTGCATTGAGAATGATGTGTTGGTTTTTAGTGATGAGGTCTATGATAAG
TTGGCTTTTGAAATGGATCACATTTCCATAGCCTCTCCTCCTGGAATGTA
TGAGCCTACTGTACCCATGAATTCCTTAGGGAAGACTTTCCCTTTAACGG
GTTGGAAAGATCGGGTGGCCAATACCCTCCCCCCCCCCTTTACTGGGGGG
GGGCGGCCGGCCCCCTTCTTTTCCCCCGTTTGCCCCCCTCCCCTCCCATG
GCAGGGGGCCCCCCCCGCCACCCCCTTAAAACTCCCGAAAAACTTACTAA
TGAAGAACCAAAAAAAAAATTTTCCCCGCAAAAAAAAGGCATTTTTTGGG
GGGAG
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