DY260252

Overview
NameDY260252
Unique NameDY260252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1055
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: YUGH_BACSU (Putative aminotransferase yugH OS=Bacillus subtilis GN=yugH PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.492e-32
Identity = 73/220 (33.18%), Postives = 125/220 (56.82%), Query Frame = 1
Query:  202 MLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGA-KIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            + A   G I+LG G P+F     V++A+I ++  G   Y    G+      I+        L   P+ E+ VT G ++A+   I  ++NPG+EVI+  P + +Y+A +S+AG   +   T     F     + ++ +++ T+AIL+ +P NPTG ++++EELN IA    ++DV+V +DE+Y +L ++ +  SIA+ PGM E TV ++   K F +TGW+
Sbjct:   23 LAATMEGVISLGVGEPDFVTAWNVREASILSLEQGYTSYTANAGLYSLREEISRYLSNRFDLSYSPDNELIVTVGASQALDIAIRAIVNPGEEVIIPEPCFVAYDALVSLAGGIPVHVHTTADKGFKATAADFEAAVTEKTKAILICSPSNPTGSVYSKEELNEIAEFAKKHDVIVLADEIYAELTYDEEFTSIAALPGMKERTVVISGFSKAFAMTGWR 242          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: PATA_BACSU (Putative aminotransferase A OS=Bacillus subtilis GN=patA PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 2.383e-30
Identity = 72/220 (32.73%), Postives = 118/220 (53.64%), Query Frame = 1
Query:  199 SMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            +++A     I+L  G P+F  P  VK AA +AI +    Y    G  E   A+    KK +    D E E+ +T+G ++AI A    +++PGDEVI+  P Y  YE  +++ GAK   +      F +    ++  ++ NT+ +++  P NPTG   + EEL  IA+L    +V V SDE+Y +L ++  H SIA+   + + T+ +N L K+  +TGW+
Sbjct:   22 NLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLTARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSDEIYSELTYDRPHYSIAT--YLRDQTIVINGLSKSHSMTGWR 239          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_RHILP (Aspartate aminotransferase OS=Rhizobium leguminosarum bv. phaseoli GN=aspC PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.308e-30
Identity = 69/215 (32.09%), Postives = 123/215 (57.21%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAF-EMDHIS-IASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD PD +K AAI AI  G+ +Y    G+PE   AIA++FK+++GL+   E+ +  T G  + +    +  +NPGDEV + AP++ SY   +++  G +      +   F +   +L+  I+  T+  + N+P NPTG  +T +EL  +  + ++N  V V +D++Y+ L + +   ++ +   P +Y+ T+ MN + K + +TGW+
Sbjct:   34 IGLGAGEPDFDTPDNIKKAAIDAINRGETKYTPVSGIPELRKAIAAKFKRENGLDYSWEQTIVGTGG-KQILFNAFMATLNPGDEVSIPAPYWVSYPEMVALCGGTRFFVSATQEHNFKLQAADLEKAITPKTKWFIFNSPSNPTGAAYTHDELKALTDVLMKNPQVWVLTDDMYEHLTYGDFKFVTPVEVEPQLYDRTLTMNGVSKAYAMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AATA_RHIME (Aspartate aminotransferase A OS=Rhizobium meliloti GN=aatA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.933e-30
Identity = 71/217 (32.72%), Postives = 122/217 (56.22%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAFEMDHISIASP----PGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD PD +K AAI AI  G+ +Y    G+PE   AIA +FK+++ L+    + +  T G  + +    +  +NPGDEV++ AP++ SY   +++  G  +   T +   F +  E+L   I+  T+  + N+P NP+G  ++ EEL  +  + +++  V V +D++Y+ L +       A+P    PG+YE T+ MN + K + +TGW+
Sbjct:   34 IGLGAGEPDFDTPDNIKKAAIDAIDRGETKYTPVSGIPELREAIAKKFKRENNLDYTAAQTIVGTGG-KQILFNAFMATLNPGDEVVIPAPYWVSYPEMVALCGGTPVFVPTRQENNFKLKAEDLDRAITPKTKWFVFNSPSNPSGAAYSHEELKALTDVLMKHPHVWVLTDDMYEHLTY--GDFRFATPVEVEPGLYERTLTMNGVSKAYAMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_SULSO (Aspartate aminotransferase OS=Sulfolobus solfataricus GN=aspC PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.307e-28
Identity = 83/263 (31.56%), Postives = 126/263 (47.91%), Query Frame = 1
Query:   79 MASLSTVSTNQSDTIHKTNLQPQQVAKCLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL---RPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            M SL   + N S    +T L  +++A+ +EK K            K   I+ G G P+      ++DAA +A+  G   Y    G+ E    IA       G +V  E EV VT G   A+    +  INP DEVIL  P + SY   + + G K     L   R   F+I +++L+S ISK T+ I+ N PHNPTG +F+  ++  I  +  +N +++ SDE+YD   +E    S        +  + +N   KTF +TGW+
Sbjct:    1 MVSLLDFNGNMSQVTGETTLLYKEIARNVEKTK------------KIKIIDFGIGQPDLPTFKRIRDAAKEALDQGFTFYTSAFGIDELREKIAQYLNTRYGTDVKKE-EVIVTPGAKPALFLVFILYINPSDEVILPDPSFYSYAEVVKLLGGKPIYANLKWSREEGFSIDVDDLQSKISKRTKMIVFNNPHNPTGTLFSPNDVKKIVDISRDNKIILLSDEIYDNFVYEGKMRSTLEDSDWRDFLIYVNGFSKTFSMTGWR 250          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_SULAC (Aspartate aminotransferase OS=Sulfolobus acidocaldarius GN=aspC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.708e-28
Identity = 74/247 (29.96%), Postives = 126/247 (51.01%), Query Frame = 1
Query:  127 KTNLQPQQVAKCLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE---FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            +T L  Q +A+ ++K K           IK   +N G G P+F     ++D A +A+  G   Y   +G+ E  + IAS         +   KEV +T G   ++    L  +NPGDEVI+F P Y SY   + M G K   + ++  E   F++ + +L++ I+  T+ +++N PHNPTG +F  +E++ +  +    +++V SDE+YD   +E    S+   P     ++ +N   KTF +TGW+
Sbjct:   16 ETTLLYQDIARSVQKEK----------GIK--IVNFGIGQPDFPTFQKIRDEAKKALDGGFTAYTSAYGIDELRAKIASFLSSKYNTNIS-SKEVIITPGAKVSLYLAFLLYVNPGDEVIIFDPSYYSYPEVVKMLGGKPVYVKMKWREDTGFSLNLNDLENKITDKTKMVVLNNPHNPTGMVFDPKEIDQLIEIAKSKNLIVLSDEIYDYFVYEGKMRSVLEDPDWKNFSIYVNGFSKTFSMTGWR 249          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_STRVG (Aspartate aminotransferase OS=Streptomyces virginiae GN=aspC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.708e-28
Identity = 66/215 (30.70%), Postives = 126/215 (58.60%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGA-KIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISI-ASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I  G G P+F  PD++ +AA++A R+ K ++Y    G+PE  +AIA++  +DSG EV+   +V VT+G  +AI      +++PGDEVI+ AP++ +Y  ++ +AG   +  +      + + +E+L++  ++ T+ +L  +P NPTG +++  +   I     E+ + V +DE+Y+ L + E    S+    P + +  + +N + KT+ +TGW+
Sbjct:   31 IGFGAGEPDFPTPDYIVEAAVEACRNPKYHRYTPAGGLPELKAAIAAKTLRDSGYEVEAS-QVLVTNGGKQAIYEAFAAILDPGDEVIVPAPYWTTYPESIRLAGGVPVDVVADETTGYRVSVEQLEAARTERTKVVLFVSPSNPTGSVYSEADAKAIGEWAAEHGLWVLTDEIYEHLVYGEAKFTSLPVLVPALRDKCIIVNGVAKTYAMTGWR 244          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_THEMA (Aspartate aminotransferase OS=Thermotoga maritima GN=aspC PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.230e-28
Identity = 72/231 (31.17%), Postives = 124/231 (53.68%), Query Frame = 1
Query:  175 KTTIFTQMSMLAIKHG--AINLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCI-TLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            KT      +   IK G   INL  G P+F  P+ V + A++ ++ G+ +Y    G+ E    IA R  +    ++ P+ +V VT+G  +A+    + L++PGDEVI+F+P + SY   + +AG  +  + T     F   +EE++  +   T+A+L+N+P+NPTG ++ RE L  +  L  + +  + SDEVYD L +  +  SI      ++  V +N   K+  +TGW+
Sbjct:   13 KTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWR 242          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_SULTO (Aspartate aminotransferase OS=Sulfolobus tokodaii GN=aspC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.107e-27
Identity = 72/214 (33.64%), Postives = 112/214 (52.34%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE---FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            IN G G P+      +++AA +++ +G   Y   +G+ E    IA      S  E   ++EV VT G   A+    L  INPGDEVI+F P + SY   + M G     + ++  E   F++ + EL+S I+K T+ I++N PHNPTG +F   E+  +  +  E  VL+ SDE+YD   +E    S+   P   +  + +N   KTF +TGW+
Sbjct:   37 INFGIGQPDLPTFARIREAAKKSLDEGFTGYTSAYGIDELRQKIAEHLS--SKYESVRKEEVIVTPGAKTALYLAFLLYINPGDEVIIFDPSFYSYAEVVKMLGGVPVYVKMKFNESTGFSLNLSELESKINKKTKMIVLNNPHNPTGMVFDPIEIEKLMEITKEKKVLLLSDEIYDYFIYEGKMKSVLEDPDWRDYVIYVNGFSKTFSMTGWR 248          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_PYRHO (Aspartate aminotransferase OS=Pyrococcus horikoshii GN=aspC PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.888e-27
Identity = 77/214 (35.98%), Postives = 113/214 (52.80%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE--MDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I+LG G P+FD P  +K+AA +A+ +G   Y    G+PE   A+   +KK  G++++ E  V +T+G  E        L+  GDEVI+  P + SY     +A AK   I LR     +P   EL   ISKNTR I++N P+NPTG    +E    IA +  + ++ + SDE Y+   +E    +  I   P   E T+  NS  KTF +TGW+
Sbjct:   35 ISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAVVEYYKKFYGIDIEVE-NVIITAGAYEGTYLAFESLLERGDEVIIPDPAFVSYAEDAKVAEAKPVRIPLREENNFLPDPNELLEKISKNTRMIVINYPNNPTGATLDKELAKTIADIAEDYNIYILSDEPYEHFIYEDAKHYPMIKFAP---ENTILANSFSKTFAMTGWR 244          
The following BLAST results are available for this feature:
BLAST of DY260252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
YUGH_BACSU1.492e-3233.18Putative aminotransferase yugH OS=Bacillus subtili... [more]
PATA_BACSU2.383e-3032.73Putative aminotransferase A OS=Bacillus subtilis G... [more]
AAT_RHILP5.308e-3032.09Aspartate aminotransferase OS=Rhizobium leguminosa... [more]
AATA_RHIME6.933e-3032.72Aspartate aminotransferase A OS=Rhizobium meliloti... [more]
AAT_SULSO1.307e-2831.56Aspartate aminotransferase OS=Sulfolobus solfatari... [more]
AAT_SULAC1.708e-2829.96Aspartate aminotransferase OS=Sulfolobus acidocald... [more]
AAT_STRVG1.708e-2830.70Aspartate aminotransferase OS=Streptomyces virgini... [more]
AAT_THEMA2.230e-2831.17Aspartate aminotransferase OS=Thermotoga maritima ... [more]
AAT_SULTO1.107e-2733.64Aspartate aminotransferase OS=Sulfolobus tokodaii ... [more]
AAT_PYRHO1.888e-2735.98Aspartate aminotransferase OS=Pyrococcus horikoshi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260252 ID=DY260252; Name=DY260252; organism=Citrus clementina; type=EST; length=1055bp
CATACAATAAGCATTACTGATTCTGTCAACACCAGAAGAAGAGGAATCAG
TACCGCTTGCCCTAGGTACCCTTCTCTCATGGCGAGCTTGTCCACCGTTT
CCACCAATCAAAGCGACACCATCCACAAGACCAATCTTCAGCCTCAACAG
GTTGCTAAGTGCTTGGAGAAGTTTAAAACTACAATCTTTACACAAATGAG
TATGCTTGCCATCAAACATGGAGCTATAAATCTTGGTCAAGGCTTTCCCA
ACTTCGATGGCCCAGATTTTGTTAAAGATGCAGCGATTCAAGCCATAAGG
GATGGGAAGAATCAATATGCTCGTGGACATGGGGTTCCAGAGTTCAACTC
TGCCATTGCTTCCCGGTTTAAGAAAGATTCTGGGCTCGAGGTTGACCCTG
AAAAGGAAGTTACTGTTACCTCTGGGTGCACCGAAGCCATTGCTGCAACC
ATCTTAGGTTTGATTAATCCTGGAGATGAGGTGATCCTTTTTGCACCTTT
CTATGATTCCTATGAAGCTACTCTCTCCATGGCTGGTGCTAAAATTAAAT
GCATCACATTGCGCCCTCCAGAATTTGCCATCCCCATTGAAGAGCTCAAG
TCTACAATCTCAAAAAATACTCGTGCAATTCTTATGAACACTCCACATAA
CCCCACTGGAAAGATGTTCACTAGGGAGGAACTTAATGTTATTGCATCTC
TTTGCATTGAGAATGATGTGTTGGTTTTTAGTGATGAGGTCTATGATAAG
TTGGCTTTTGAAATGGATCACATTTCCATAGCCTCTCCTCCTGGAATGTA
TGAGCCTACTGTACCCATGAATTCCTTAGGGAAGACTTTCCCTTTAACGG
GTTGGAAAGATCGGGTGGCCAATACCCTCCCCCCCCCCTTTACTGGGGGG
GGGCGGCCGGCCCCCTTCTTTTCCCCCGTTTGCCCCCCTCCCCTCCCATG
GCAGGGGGCCCCCCCCGCCACCCCCTTAAAACTCCCGAAAAACTTACTAA
TGAAGAACCAAAAAAAAAATTTTCCCCGCAAAAAAAAGGCATTTTTTGGG
GGGAG
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