DY260252

Overview
NameDY260252
Unique NameDY260252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1055
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_RICBR (Aspartate aminotransferase OS=Rickettsia bellii (strain RML369-C) GN=aatA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 9.370e-27
Identity = 70/215 (32.56%), Postives = 122/215 (56.74%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSY-EATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND-VLVFSDEVYDKLAFE-MDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD PD +K+AAI+AI+DG  +Y    G+P    AI ++FK+++ ++ D E E+ V++G  + I    +  +N GDEVI+ AP++ SY +  L   G  +         F +  E L+  I+  T+ +++N+P NPTG  ++  EL  IA +  ++  V V SD++Y+ + F+     ++A   P + +    +N + K + +TGW+
Sbjct:   34 IALGAGEPDFDTPDNIKEAAIKAIKDGFTKYTNVEGIPALKEAIQAKFKRENNIDYDLE-EIIVSTGGKQVIYNLFMASLNKGDEVIIPAPYWVSYPDMVLLAEGTPVFANCGIESNFKLSGEALEQLITPKTKWLIINSPSNPTGASYSHSELKNIAEVLRKHPYVNVMSDDIYEHITFDGFKFYTLAEIAPDLKDRIFTVNGVSKAYSMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AATB2_RHIME (Aspartate aminotransferase B OS=Rhizobium meliloti GN=aatB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.308e-25
Identity = 63/217 (29.03%), Postives = 120/217 (55.30%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAFEMDHISIASP----PGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD PD VK AA  AI  G+ +Y    G PE   AI  +F++++GL  + + E+TV +G  + +   ++  ++PGDEV++  P++ SY   + +   K   I       F +  ++L++ I+  TR +L+N+P NP+G  ++  +   +  + +++  V +  D++Y+ + +  D     +P    PG+ + T+ +N + K + +TGW+
Sbjct:   44 IILGAGEPDFDTPDHVKQAASDAIHRGETKYTALDGTPELKKAIREKFQRENGLAYELD-EITVATGAKQILFNAMMASLDPGDEVVIPTPYWTSYSDIVQICEGKPILIACDASSGFRLTAQKLEAAITPRTRWVLLNSPSNPSGAAYSAADYRPLLDVLLKHPHVWLLVDDMYEHIVY--DAFRFVTPARLEPGLKDRTLTVNGVSKAYAMTGWR 257          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AATB1_RHIME (Aspartate aminotransferase B OS=Rhizobium meliloti GN=aatB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 5.141e-25
Identity = 64/217 (29.49%), Postives = 118/217 (54.38%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAFEMDHISIASP----PGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD P+ VK AA  AI  G+ +Y    G PE   AI  +F++++GL  + + E+TV +G  + +   ++  ++PGDEVI+  P++ SY   + +   K   I       F +  E+L++ I+  TR +L+N+P NP+G  ++  +   +  + + +  V +  D++Y+ + +  D     +P    PG+   T+ +N + K + +TGW+
Sbjct:   44 IILGAGEPDFDTPEHVKQAASDAIHRGETKYTALDGTPELKKAIREKFQRENGLAYELD-EITVATGAKQILFNAMMASLDPGDEVIIPTPYWTSYSDIVHICEGKPVLIACDASSGFRLTAEKLEAAITPRTRWVLLNSPSNPSGAAYSAADYRPLLEVLLRHPHVWLLVDDMYEHIVY--DGFRFVTPAQLEPGLKNRTLTVNGVSKAYAMTGWR 257          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_SYNY3 (Aspartate aminotransferase OS=Synechocystis sp. (strain PCC 6803) GN=aspC PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.770e-25
Identity = 63/210 (30.00%), Postives = 120/210 (57.14%), Query Frame = 1
Query:  241 GFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE-NDVLVFSDEVYDKLAFE-MDHISI-ASPPGMYEPTVPMNSLGKTFPLTGWK 858
            G P+F  P  + +AA  A+ +GK +Y    G P    AIA + ++ + L  +    + VT+G   ++   +L +I  GDEVI+ AP++ SY   + +A G  +   T    ++ I  E+L+  I+  ++  ++N+P NPTG ++T  E+  +A++ +E  D+ V SDE+Y+++ ++  +H+SI A    +++ T+  N   K++ +TGW+
Sbjct:   38 GEPDFTTPPHIVEAAKLALDEGKTRYGPAAGEPALRQAIAKKLREKNNLPYEAAN-ILVTNGGKHSLFNLMLAMIEQGDEVIIPAPYWLSYPEMVRLAEGTPVIVNTTAATDYKITPEQLRQAITSKSKLFVLNSPSNPTGAVYTPAEIRALAAVILEYEDLYVVSDEIYERILYDGTEHLSIGAVNDEIFQRTIISNGFAKSYSMTGWR 246          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_RICCN (Aspartate aminotransferase OS=Rickettsia conorii GN=aatA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.770e-25
Identity = 66/215 (30.70%), Postives = 123/215 (57.21%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE-NDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD PD +K+ AI+AI+DG  +Y    G+P    AI  +FK+++ ++ + + E+ V++G  + I    +  ++ GDEVI+ AP++ SY   ++++ G  +         F +  E L+ +I+  T+ +++N+P NPTG  +  EEL  IA +  + + V V SD++Y+ + F +    ++A   P + +    +N + K + +TGW+
Sbjct:   34 ITLGAGEPDFDTPDNIKEGAIKAIKDGFTKYTNVEGMPLLKQAIKDKFKRENNIDYELD-EIIVSTGGKQVIYNLFMASLDQGDEVIIPAPYWVSYPDMVALSTGTPVFVNCGIENNFKLSAEALERSITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYSHVNVMSDDIYEHITFDDFKFYTLAQIAPDLKKRIFTVNGVSKAYSMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_RICFE (Aspartate aminotransferase OS=Rickettsia felis GN=aatA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.145e-24
Identity = 67/215 (31.16%), Postives = 123/215 (57.21%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE-NDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            I LG G P+FD PD +K+AAI+AI+DG  +Y    G+P    AI  +FK+++ ++ + + E+ V++G  + I    +  ++ GD+VI+ AP++ SY   ++++ G  +         F +  E L+ +I+  T+ +++N+P NPTG  +  EEL  IA +  +   V V SD++Y+ + F +    ++A   P + E    +N + K + +TGW+
Sbjct:   34 IALGAGEPDFDTPDNIKEAAIKAIKDGFTKYTNVEGMPLLKQAIKDKFKRENNIDYELD-EIIVSTGGKQVIYNLFMASLDKGDKVIIPAPYWVSYPDMVALSTGTPVFVNCGIENNFKLSAEALERSITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYSMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_RICTY (Aspartate aminotransferase OS=Rickettsia typhi GN=aatA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.552e-24
Identity = 67/233 (28.76%), Postives = 129/233 (55.36%), Query Frame = 1
Query:  181 TIFTQMSMLAIKHGAIN---LGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL-NVIASLCIENDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            T+      L +K   +N   LG G P+FD PD +K+ AI +I+DG  +Y    G+P    AI ++FK+++ ++ + + E+ V++G  + I    +  ++ GDEVI+  P++ SY   ++++ G  I         F + +E L+ +I+  T+ +++N+P NPTG  +  +EL N+  +L    +V + SD++Y+ + F +    ++A   P + E    +N + K + +TGW+
Sbjct:   16 TLAVVKKTLELKKAGVNIIALGAGEPDFDTPDNIKEVAITSIKDGFTKYTNVDGIPLLKQAIKNKFKRENNIDYELD-EIIVSTGGKQVIYNLFMASLDKGDEVIIPVPYWVSYPDMVALSTGTPIFVNCGIENNFKLTVEALERSITDKTKWLIINSPSNPTGAGYNCKELENIAKTLRKYPNVNIMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYSMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_RICPR (Aspartate aminotransferase OS=Rickettsia prowazekii GN=aatA PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 3.333e-24
Identity = 66/233 (28.33%), Postives = 129/233 (55.36%), Query Frame = 1
Query:  181 TIFTQMSMLAIKHGAIN---LGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREEL-NVIASLCIENDVLVFSDEVYDKLAF-EMDHISIAS-PPGMYEPTVPMNSLGKTFPLTGWK 858
            T+      L +K   +N   LG G P+FD PD +K+ AI +I+DG  +Y    G+P    AI ++FK+++ ++ + + E+ V++G  + I    +  ++ GDEVI+  P++ SY   ++++ G  +         F + +E L+ +I+  T+ +++N+P NPTG  +  +EL N+  +L    +V + SD++Y+ + F +    ++A   P + E    +N + K + +TGW+
Sbjct:   16 TLAVVKKTLELKKAGVNIIALGAGEPDFDTPDNIKEVAITSIKDGFTKYTNVDGIPLLKQAIKNKFKRENNIDYELD-EIIVSTGGKQVIYNLFMASLDKGDEVIIPVPYWVSYPDMVALSTGTPVFVNCGIENNFKLSVEALEHSITDKTKWLIINSPSNPTGAGYNCKELENIAKTLRKYPNVNIMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYSMTGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT_STRGR (Probable aspartate aminotransferase (Fragment) OS=Streptomyces griseus GN=aspC PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.072e-22
Identity = 54/173 (31.21%), Postives = 100/173 (57.80%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEV 741
            I  G G P+F  PD++ DAA++A R+ K         PE  +AIA +  +DSG EVD   ++ VT+G  +AI      +++PGDEVI+ AP++ +Y  ++ +A G  ++ +      + + +E+L++  ++ T+ +L  +P NPTG +++  +   I    +E+ + V +DE+
Sbjct:   42 IGFGAGEPDFPTPDYIVDAAVEACRNPKYHRYTPQRAPELKAAIAEKTLRDSGYEVD-AGQILVTNGGKQAIYEAFAAILDPGDEVIVPAPYWTTYPESIRLAGGVPVEVVADETTGYRVSVEQLEAARTEKTKVVLFVSPSNPTGAVYSEADAEAIGRWAVEHGLWVMTDEI 213          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: DAPAT_SYNFM (LL-diaminopimelate aminotransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=dapL PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.074e-22
Identity = 66/214 (30.84%), Postives = 105/214 (49.07%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRD-GKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITL-RPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            INLG G P+   PD +      A  D   +QY    G+ +F  ++A  +K+  G+E+DP  EV    G  E +A   L +INPGD  ++  P Y  Y      AG +   + L R   F   ++ + + +++  + + +N P+NPTG    R+    + +   E DV+V  D  Y ++AF     +S    PG  E  V  +SL KT+ +TGW+
Sbjct:   35 INLGVGDPDLPTPDHIIARLKTAAEDPSTHQYPSYSGMNDFKVSVAGWYKRRFGVELDPLSEVLTLIGSKEGLAHFPLAVINPGDLALVPTPAYPVYHVATMFAGGESYFMPLVRENGFLPDLDSIPADVARRAKVMFINYPNNPTGATAERDFFEKVIAFAREYDVIVCHDAAYTEMAFGGYRPLSFLELPGAGEVGVEFHSLSKTYNMTGWR 248          
The following BLAST results are available for this feature:
BLAST of DY260252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
AAT_RICBR9.370e-2732.56Aspartate aminotransferase OS=Rickettsia bellii (s... [more]
AATB2_RHIME2.308e-2529.03Aspartate aminotransferase B OS=Rhizobium meliloti... [more]
AATB1_RHIME5.141e-2529.49Aspartate aminotransferase B OS=Rhizobium meliloti... [more]
AAT_SYNY38.770e-2530.00Aspartate aminotransferase OS=Synechocystis sp. (s... [more]
AAT_RICCN8.770e-2530.70Aspartate aminotransferase OS=Rickettsia conorii G... [more]
AAT_RICFE1.145e-2431.16Aspartate aminotransferase OS=Rickettsia felis GN=... [more]
AAT_RICTY2.552e-2428.76Aspartate aminotransferase OS=Rickettsia typhi GN=... [more]
AAT_RICPR3.333e-2428.33Aspartate aminotransferase OS=Rickettsia prowazeki... [more]
AAT_STRGR1.072e-2231.21Probable aspartate aminotransferase (Fragment) OS=... [more]
DAPAT_SYNFM4.074e-2230.84LL-diaminopimelate aminotransferase OS=Syntrophoba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260252 ID=DY260252; Name=DY260252; organism=Citrus clementina; type=EST; length=1055bp
CATACAATAAGCATTACTGATTCTGTCAACACCAGAAGAAGAGGAATCAG
TACCGCTTGCCCTAGGTACCCTTCTCTCATGGCGAGCTTGTCCACCGTTT
CCACCAATCAAAGCGACACCATCCACAAGACCAATCTTCAGCCTCAACAG
GTTGCTAAGTGCTTGGAGAAGTTTAAAACTACAATCTTTACACAAATGAG
TATGCTTGCCATCAAACATGGAGCTATAAATCTTGGTCAAGGCTTTCCCA
ACTTCGATGGCCCAGATTTTGTTAAAGATGCAGCGATTCAAGCCATAAGG
GATGGGAAGAATCAATATGCTCGTGGACATGGGGTTCCAGAGTTCAACTC
TGCCATTGCTTCCCGGTTTAAGAAAGATTCTGGGCTCGAGGTTGACCCTG
AAAAGGAAGTTACTGTTACCTCTGGGTGCACCGAAGCCATTGCTGCAACC
ATCTTAGGTTTGATTAATCCTGGAGATGAGGTGATCCTTTTTGCACCTTT
CTATGATTCCTATGAAGCTACTCTCTCCATGGCTGGTGCTAAAATTAAAT
GCATCACATTGCGCCCTCCAGAATTTGCCATCCCCATTGAAGAGCTCAAG
TCTACAATCTCAAAAAATACTCGTGCAATTCTTATGAACACTCCACATAA
CCCCACTGGAAAGATGTTCACTAGGGAGGAACTTAATGTTATTGCATCTC
TTTGCATTGAGAATGATGTGTTGGTTTTTAGTGATGAGGTCTATGATAAG
TTGGCTTTTGAAATGGATCACATTTCCATAGCCTCTCCTCCTGGAATGTA
TGAGCCTACTGTACCCATGAATTCCTTAGGGAAGACTTTCCCTTTAACGG
GTTGGAAAGATCGGGTGGCCAATACCCTCCCCCCCCCCTTTACTGGGGGG
GGGCGGCCGGCCCCCTTCTTTTCCCCCGTTTGCCCCCCTCCCCTCCCATG
GCAGGGGGCCCCCCCCGCCACCCCCTTAAAACTCCCGAAAAACTTACTAA
TGAAGAACCAAAAAAAAAATTTTCCCCGCAAAAAAAAGGCATTTTTTGGG
GGGAG
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