DY260252

Overview
NameDY260252
Unique NameDY260252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1055
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: Y286_HAEIN (Uncharacterized aminotransferase HI0286 OS=Haemophilus influenzae GN=HI0286 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.950e-18
Identity = 55/216 (25.46%), Postives = 117/216 (54.17%), Query Frame = 1
Query:  226 INLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE---MDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            +N+G   P  F+ PD +    ++ +   +  Y    G+     AI  ++ +  G+      +V + +G +E I   +  L+N GDEV++  P Y  + A ++++G K +  +      +   I+++K+ ++  T+AI++  P+NPTG ++++E L  I  +  +N++++F+DE+YDK+ ++     HI+  +P  +   TV +N L K + + G++
Sbjct:   38 LNIGNPAPFGFEAPDEILVDVLRNLPSAQG-YCDSKGLYSARKAIV-QYYQSKGILGATVNDVYIGNGVSELITMAMQALLNDGDEVLVPMPDYPLWTAAVTLSGGKAVHYLCDEDANWFPTIDDIKAKVNAKTKAIVIINPNNPTGAVYSKELLQEIVEIARQNNLIIFADEIYDKILYDGAVHHHIAALAPDLL---TVTLNGLSKAYRVAGFR 248          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT2_BACSU (Probable aspartate aminotransferase OS=Bacillus subtilis GN=ywfG PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.021e-17
Identity = 63/245 (25.71%), Postives = 111/245 (45.31%), Query Frame = 1
Query:  136 LQPQQVAKCLEKFKTTIFTQMSMLAIKHGA--INLGQGFPNFDGPDFVKDAAIQA-IRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            + P  V K L + + ++  Q      K GA  INLGQG P+   P  + +A  +A +    + Y    G P    AIA+ +K++ G+ ++PE EV +  G    +      L+NPGD  ++  P Y  Y + ++MA A++  + L      +P  E++   + +  + + +N P+NPTG +         A+   E+++ +  D  Y    F+    S             + S  KTF + GW+
Sbjct:    3 ITPSDVIKTLPRQEFSLVFQKVKEMEKTGAHIINLGQGNPDLPTPPHIVEALREASLNPSFHGYGPFRGYPFLKEAIAAFYKREYGVTINPETEVALFGGGKAGLYVLTQCLLNPGDIALVPNPGYPEYLSGITMARAELYEMPLYEENGYLPDFEKIDPAVLEKAKLMFLNYPNNPTGAVADAAFYAKAAAFAKEHNIHLIHDFAYGAFEFDQKPASFLEAEDAKTVGAELYSFSKTFNMAGWR 247          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: DAPAT_CARHZ (LL-diaminopimelate aminotransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapL PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.946e-17
Identity = 56/214 (26.17%), Postives = 104/214 (48.60%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHI-SIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I+LG G P+   P  + +    A ++ +N QY    G+  +  A+A+ + +  G+E+DP+ EV    G  E IA      ++PGD V++  P Y  YE    +AG     + L+P    +P ++ +   +++  + + +N P+NPTG +        +     + ++LV  D  Y ++ F+     S     G  +  +  +SL KT+ +TGW+
Sbjct:   33 ISLGIGDPDTPTPKHIIEELYLAAQNPENHQYPSSVGMLSYRQAVAAWYARRFGVELDPKTEVVSLLGSKEGIAHISWCYVDPGDLVLVPDPGYPVYEGGTILAGGTTYKMPLKPENGFLPDLDSIPEEVARKAKLMFINYPNNPTGAVADLGFFEKVVHFAKKYEILVCHDAAYSEITFDGYRAPSFLEVKGAKDVGIEFHSLSKTYNMTGWR 246          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: AAT3_BACSU (Putative aspartate aminotransferase yhdR OS=Bacillus subtilis GN=yhdR PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.946e-17
Identity = 57/214 (26.64%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  241 GFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIA----SRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIE------NDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTG 852
            G P  + P+  K A I+    G + Y +  G+      +A    SRF+ D   E      + +T G   A+   +  ++NPG+EVI+ AP++  Y+  +   G K     L    F I IE ++ +I+  T+ +++NTPHNPTG + +++ ++ + +L  E        + V  DE Y +L ++ +   +A+P   Y   +  +S  K   + G
Sbjct:   45 GNPIVEPPEAFKRALIEEAEKGSHGYIQNQGLLAAREKVAQFLGSRFEADFSAE-----RIVMTVGAGGALNVALKSIVNPGEEVIILAPYFAEYKLYIENYGGKAVSCPLTS-RFEIDIEAVRQSITPQTKGLILNTPHNPTGTVLSQKNIDDLGALLKEIEEKSGQTIYVLFDEPYSQLIYDEE---LANPFQSYHRVILASSFSKDLGIAG 249          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: DAPAT_MOOTA (LL-diaminopimelate aminotransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=dapL PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.153e-17
Identity = 55/214 (25.70%), Postives = 101/214 (47.20%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHI-SIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I+LG G P+   P  V D  +    + +N +Y    G+  F  A+A  +++  G+++DP +EV    G  E IA   L  ++PGD  ++  P Y  Y     +AG +   + L      +P +  + S +++  + + +N P+NPTG +   +    +       D++V  D  Y ++ ++     S    PG  E  +  NS+ K + +TGW+
Sbjct:   33 ISLGIGDPDMPTPSHVIDKLVAEAHNPENHRYPTSEGLLAFRQAVADWYQRLYGVDLDPRREVVTLIGSKEGIAHISLCYVDPGDINLVPDPGYPVYNIGTLLAGGESYFMPLTAANGFLPDLGAIPSDVARRAKLMFINYPNNPTGAVADLKFFQEVVEFARSYDLIVCHDAAYSEITYDGYRAPSFLQAPGAKEVGIEFNSVSKPYNMTGWR 246          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: DAPAT_DEHSC (LL-diaminopimelate aminotransferase OS=Dehalococcoides sp. (strain CBDB1) GN=dapL PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.148e-16
Identity = 59/245 (24.08%), Postives = 114/245 (46.53%), Query Frame = 1
Query:  148 QVAKCLEKFKTTIFTQMSMLAIKHGA-----INLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            +++K +E     +F Q+S    +  A     I+   G P+   P  +     +A  D  N +Y    G+P    A+A  ++K  G++++P+ EV    G  E I       ++PGD  ++  P Y  Y  +  +AGA++  + L      +P +E +   I    + + +N P+NPTG +        +A+   ++++ V  D  Y ++AF+    +S     G  +  +  +SL K++ +TGW+
Sbjct:    2 KLSKRIENLPPYLFVQISKKIAEKRAKGEEVISFAIGDPDLPTPKHILAELCKAAEDPSNHRYPETEGLPVLRKAMAEWYQKRFGVKLNPDTEVLPLIGSKEGIGHAAWCFLDPGDIALVPNPAYPVYAISSQLAGAEVFNLPLNKGNNFLPNLEAIPQNILSKAKVLWINYPNNPTGAVAGLSFFQEVANFAAKHNLAVCHDGPYSEIAFDGYKPVSFLEADGAKDVGIEFHSLSKSYNMTGWR 246          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: DAPAT_DEHSB (LL-diaminopimelate aminotransferase OS=Dehalococcoides sp. (strain BAV1) GN=dapL PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.148e-16
Identity = 59/245 (24.08%), Postives = 114/245 (46.53%), Query Frame = 1
Query:  148 QVAKCLEKFKTTIFTQMSMLAIKHGA-----INLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            +++K +E     +F Q+S    +  A     I+   G P+   P  +     +A  D  N +Y    G+P    A+A  ++K  G++++P+ EV    G  E I       ++PGD  ++  P Y  Y  +  +AGA++  + L      +P +E +   I    + + +N P+NPTG +        +A+   ++++ V  D  Y ++AF+    +S     G  +  +  +SL K++ +TGW+
Sbjct:    2 KLSKRIENLPPYLFVQISKKIAEKRAKGEDVISFAIGDPDLPTPKHILAELCKAAEDPSNHRYPETEGLPVLRKAMAEWYQKRFGVKLNPDTEVLPLIGSKEGIGHAAWCFLDPGDIALVPNPAYPVYAISSQLAGAEVFNLPLNKGNNFLPNLEAIPQNILSKAKVLWINYPNNPTGAVAGLSFFQEVANFAAKHNLAVCHDGPYSEIAFDGYKPVSFLEADGAKDVGIEFHSLSKSYNMTGWR 246          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: Y1391_METJA (Uncharacterized aminotransferase MJ1391 OS=Methanocaldococcus jannaschii GN=MJ1391 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.558e-16
Identity = 55/213 (25.82%), Postives = 95/213 (44.60%), Query Frame = 1
Query:  226 INLGQGFPNFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGL-EVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            I++G G P+      V     +  +  +N+    +G+ E   A+    +K  G+ ++DP  EV  + G   A+A      INPGD  ++  P Y          G ++  + L      +P +E +   I K  + + +N P+NPTG   T++    +     EN+V+V  D  Y  L ++   +S  S     E  V ++S  K F +TGW+
Sbjct:   47 IDMGVGEPDEMADPEVIRVLCEEAKKWENRGYADNGIQELKDAVPPYMEKVYGVKDIDPVNEVIHSIGSKPALAYITSAFINPGDVCLMTVPGYPVTATHTKWYGGEVYNLPLLEENDFLPDLESIPEDIKKRAKILYLNYPNNPTGAQATKKFYKEVVDFAFENEVIVVQDAAYGALVYDGKPLSFLSVKDAKEVGVEIHSFSKAFNMTGWR 259          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: ATTY_BOVIN (Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.441e-16
Identity = 65/256 (25.39%), Postives = 112/256 (43.75%), Query Frame = 1
Query:  100 STNQSDTIHKTNLQPQQVAKCLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            S   SD  +KT      +   ++  K       +M+A+  G   +   F N      V  A   A+  GK N Y    G       +AS +   ++ LE    K+V +TSGC++AI   +  L NPG  +++  P +  Y       G ++K   L P + + I +++L+S I + T  +++N P NP G +F+R  L  I ++     V + +DE+Y  + F        +      P +    L K + + GW+
Sbjct:   35 SVRPSDMSNKTF---NPIRAIVDNMKVKPNPNKTMIALSIGDPTV---FGNLPTDPEVTQAMKDALDSGKFNGYVPSIGYLSSREEVASYYHCPEAPLEA---KDVILTSGCSQAIELCLAVLANPGQNILVPRPGFSLYRTLAESMGIEVKLYNLLPEKNWEIDLKQLESLIDEKTVCLIVNNPSNPCGSVFSRRHLQKILAVAARQCVPILADEIYGDMVFSDSKFEPLATLSSKVPILSCGGLAKRWLVPGWR 281          
BLAST of DY260252 vs. ExPASy Swiss-Prot
Match: DAPAT_DEHE1 (LL-diaminopimelate aminotransferase OS=Dehalococcoides ethenogenes (strain 195) GN=dapL PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.658e-15
Identity = 58/245 (23.67%), Postives = 111/245 (45.31%), Query Frame = 1
Query:  148 QVAKCLEKFKTTIFTQMSMLAIKHGA-----INLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFE-MDHISIASPPGMYEPTVPMNSLGKTFPLTGWK 858
            +++K +E     +F Q+S    +  A     I+   G P+   P  +     +A  D  N +Y    G+P    A+A  ++K  G++++P+ EV    G  E I       ++PGD  ++  P Y  Y  +  +AGA++  + L      +P    +   +    + + +N P+NPTG +   +     A    ++++ V  D  Y ++AF+    +S     G  E  +  +SL K++ +TGW+
Sbjct:    2 KLSKRIENLPPYLFVQISKKIAEKRAKGEEVISFAIGDPDLPTPKHILAELCKAAEDPANHRYPETEGLPVLRKAMAEWYEKRFGVKLNPDTEVLPLIGSKEGIGHAAWCFLDPGDVALVPDPAYPVYAISSQLAGAEVFYMPLNKENNFLPDFNAIPQDVLSKAKILWINYPNNPTGAVAGLDFFKEAAEFAAKHNLAVCHDGPYSEIAFDGYRPVSFLEADGAKEVGIEFHSLSKSYNMTGWR 246          
The following BLAST results are available for this feature:
BLAST of DY260252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
Y286_HAEIN7.950e-1825.46Uncharacterized aminotransferase HI0286 OS=Haemoph... [more]
AAT2_BACSU3.021e-1725.71Probable aspartate aminotransferase OS=Bacillus su... [more]
DAPAT_CARHZ3.946e-1726.17LL-diaminopimelate aminotransferase OS=Carboxydoth... [more]
AAT3_BACSU3.946e-1726.64Putative aspartate aminotransferase yhdR OS=Bacill... [more]
DAPAT_MOOTA5.153e-1725.70LL-diaminopimelate aminotransferase OS=Moorella th... [more]
DAPAT_DEHSC1.148e-1624.08LL-diaminopimelate aminotransferase OS=Dehalococco... [more]
DAPAT_DEHSB1.148e-1624.08LL-diaminopimelate aminotransferase OS=Dehalococco... [more]
Y1391_METJA2.558e-1625.82Uncharacterized aminotransferase MJ1391 OS=Methano... [more]
ATTY_BOVIN7.441e-1625.39Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=... [more]
DAPAT_DEHE11.658e-1523.67LL-diaminopimelate aminotransferase OS=Dehalococco... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260252 ID=DY260252; Name=DY260252; organism=Citrus clementina; type=EST; length=1055bp
CATACAATAAGCATTACTGATTCTGTCAACACCAGAAGAAGAGGAATCAG
TACCGCTTGCCCTAGGTACCCTTCTCTCATGGCGAGCTTGTCCACCGTTT
CCACCAATCAAAGCGACACCATCCACAAGACCAATCTTCAGCCTCAACAG
GTTGCTAAGTGCTTGGAGAAGTTTAAAACTACAATCTTTACACAAATGAG
TATGCTTGCCATCAAACATGGAGCTATAAATCTTGGTCAAGGCTTTCCCA
ACTTCGATGGCCCAGATTTTGTTAAAGATGCAGCGATTCAAGCCATAAGG
GATGGGAAGAATCAATATGCTCGTGGACATGGGGTTCCAGAGTTCAACTC
TGCCATTGCTTCCCGGTTTAAGAAAGATTCTGGGCTCGAGGTTGACCCTG
AAAAGGAAGTTACTGTTACCTCTGGGTGCACCGAAGCCATTGCTGCAACC
ATCTTAGGTTTGATTAATCCTGGAGATGAGGTGATCCTTTTTGCACCTTT
CTATGATTCCTATGAAGCTACTCTCTCCATGGCTGGTGCTAAAATTAAAT
GCATCACATTGCGCCCTCCAGAATTTGCCATCCCCATTGAAGAGCTCAAG
TCTACAATCTCAAAAAATACTCGTGCAATTCTTATGAACACTCCACATAA
CCCCACTGGAAAGATGTTCACTAGGGAGGAACTTAATGTTATTGCATCTC
TTTGCATTGAGAATGATGTGTTGGTTTTTAGTGATGAGGTCTATGATAAG
TTGGCTTTTGAAATGGATCACATTTCCATAGCCTCTCCTCCTGGAATGTA
TGAGCCTACTGTACCCATGAATTCCTTAGGGAAGACTTTCCCTTTAACGG
GTTGGAAAGATCGGGTGGCCAATACCCTCCCCCCCCCCTTTACTGGGGGG
GGGCGGCCGGCCCCCTTCTTTTCCCCCGTTTGCCCCCCTCCCCTCCCATG
GCAGGGGGCCCCCCCCGCCACCCCCTTAAAACTCCCGAAAAACTTACTAA
TGAAGAACCAAAAAAAAAATTTTCCCCGCAAAAAAAAGGCATTTTTTGGG
GGGAG
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