DY260257

Overview
NameDY260257
Unique NameDY260257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1038
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.051e-14
Identity = 48/144 (33.33%), Postives = 83/144 (57.64%), Query Frame = 1
Query:   79 DQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +++   ++ F   DKD  G I  +E   + + +  NP       MI   D DG G +DF EF++ ++      + E++L+ AF+V+D D++G+IS  EL  V+     +NL ++   + VD+ I EAD+D DG+I++EEF K++
Sbjct:   21 EEVDRLRKRFMKLDKDNSGTIEREEFLSLPQ-ISTNPLATR---MIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVLKMMVGSNLKDQQLQQIVDKTIMEADLDKDGKISFEEFTKMV 160          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CML30_ORYSJ (Probable calcium-binding protein CML30 OS=Oryza sativa subsp. japonica GN=CML30 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.373e-14
Identity = 61/183 (33.33%), Postives = 85/183 (46.45%), Query Frame = 1
Query:   49 RRKMADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLG-PNPPEAELQDMINEVDADGNGTIDFPEFLNLM-----ARKMKDTH-----------------------SEEELKEAFRVFDKDQNGFISAAELRHVMTNL-----GEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +R   +P   D  ++    FS FD DGDG IT  EL   ++ LG      AE   ++  VDA+ +G ID  EF  L       RK    H                        E +L+EAF VFD +++G ISA EL  V+ +L     G +    E  +MIR  D DGDG +++EEF ++M
Sbjct:   49 KRPEEEPRRPDPDADLGIVFSTFDHDGDGFITAAELEESLKRLGIAVSSAAEAAALVARVDANSDGLIDIHEFRELYDSIPKRRKSHQQHPLPSTAAADEEAAAADEEYEAEEEERDLREAFDVFDGNKDGLISAEELGTVLESLGLRQHGGRPAVAECRDMIRLVDSDGDGMVSFEEFKRMM 231          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: MYL10_MOUSE (Myosin regulatory light chain 10 OS=Mus musculus GN=Myl10 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 1
Query:   82 QISEFKEAFSLFDKDGDGCITTKELGPVMRSLGP-NPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            QI EFKEAF++ D++ DG I  ++L     +LG  N    EL+ M+ E      G I+F  FL +   K+K T  EE +  AF+VFD +  GF+ A  ++  +    ++ ++EEV +M      D  G ++Y     V+
Sbjct:   61 QIQEFKEAFTIMDQNRDGFIDKEDLRDTFAALGRINVKNEELEAMVKEAP----GPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADFIKEKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVI 195          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: MLRB_CHICK (Myosin regulatory light chain 2B, cardiac muscle isoform OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 1
Query:   82 QISEFKEAFSLFDKDGDGCITTKELGPVMRSLGP-NPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            QI EFKEAF++ D++ DG I   +L     +LG  N    EL+DM+ E      G I+F  FL +   K+K T  EE +  AF++FD +  G I A  ++ ++     + + EE+++M      D  G ++Y+    V+
Sbjct:   24 QIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEDMVKEAP----GPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQEGRFSQEEINQMFAAFPPDVSGNLDYKNLCYVI 158          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 1
Query:   79 DQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 483
            D+I   ++ F   D D  G + T E    +  +  NP  + L D+ +E   + +G +DF EF+N ++      + +E+L+ AF+V+D D++G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF
Sbjct:   20 DEIDRLRKRFMKLDTDASGILETNEFLS-LPGVAANPLASRLMDVFDE---NHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIVDKTIMEADKDGDGKISFEEF 155          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 1
Query:   76 DDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +++I   ++ F   D +  G I   E   +  S+  NP  + L    + VD DG G +DF EF+N ++      + EE+LK AF+++D D++G+IS  EL  V+     TNL E    + VD+ I E D D DG+I++EEF  ++
Sbjct:   20 NEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIV 160          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CABP7_RAT (Calcium-binding protein 7 OS=Rattus norvegicus GN=Cabp7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 44/124 (35.48%), Postives = 75/124 (60.48%), Query Frame = 1
Query:   73 PDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEEL--KEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMI 435
            P+D++ E +EAF +FD+DG+G I+ +ELG  MRSLG  P E EL+ +I  +D DG+G +DF EF+ L+  K+  +   E+    +   VF K     ++  EL+ ++     E L+ ++++ +I
Sbjct:   31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENII 154          

HSP 2 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  307 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++
Sbjct:   36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CABP7_PAPAN (Calcium-binding protein 7 OS=Papio anubis GN=CABP7 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 44/124 (35.48%), Postives = 75/124 (60.48%), Query Frame = 1
Query:   73 PDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEEL--KEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMI 435
            P+D++ E +EAF +FD+DG+G I+ +ELG  MRSLG  P E EL+ +I  +D DG+G +DF EF+ L+  K+  +   E+    +   VF K     ++  EL+ ++     E L+ ++++ +I
Sbjct:   31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENII 154          

HSP 2 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  307 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++
Sbjct:   36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CABP7_MOUSE (Calcium-binding protein 7 OS=Mus musculus GN=Cabp7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 44/124 (35.48%), Postives = 75/124 (60.48%), Query Frame = 1
Query:   73 PDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEEL--KEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMI 435
            P+D++ E +EAF +FD+DG+G I+ +ELG  MRSLG  P E EL+ +I  +D DG+G +DF EF+ L+  K+  +   E+    +   VF K     ++  EL+ ++     E L+ ++++ +I
Sbjct:   31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENII 154          

HSP 2 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  307 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++
Sbjct:   36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CABP7_HUMAN (Calcium-binding protein 7 OS=Homo sapiens GN=CABP7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.794e-14
Identity = 44/124 (35.48%), Postives = 75/124 (60.48%), Query Frame = 1
Query:   73 PDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEEL--KEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMI 435
            P+D++ E +EAF +FD+DG+G I+ +ELG  MRSLG  P E EL+ +I  +D DG+G +DF EF+ L+  K+  +   E+    +   VF K     ++  EL+ ++     E L+ ++++ +I
Sbjct:   31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENII 154          

HSP 2 Score: 68.9366 bits (167), Expect = 5.400e-11
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 1
Query:  307 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++
Sbjct:   36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98          
The following BLAST results are available for this feature:
BLAST of DY260257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 465
Match NameE-valueIdentityDescription
CANB_NEUCR1.051e-1433.33Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
CML30_ORYSJ1.373e-1433.33Probable calcium-binding protein CML30 OS=Oryza sa... [more]
MYL10_MOUSE1.794e-1433.09Myosin regulatory light chain 10 OS=Mus musculus G... [more]
MLRB_CHICK1.794e-1432.37Myosin regulatory light chain 2B, cardiac muscle i... [more]
CANB_YARLI1.794e-1434.29Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]
CANB_SCHPO1.794e-1434.48Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CABP7_RAT1.794e-1435.48Calcium-binding protein 7 OS=Rattus norvegicus GN=... [more]
CABP7_PAPAN1.794e-1435.48Calcium-binding protein 7 OS=Papio anubis GN=CABP7... [more]
CABP7_MOUSE1.794e-1435.48Calcium-binding protein 7 OS=Mus musculus GN=Cabp7... [more]
CABP7_HUMAN1.794e-1435.48Calcium-binding protein 7 OS=Homo sapiens GN=CABP7... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260257 ID=DY260257; Name=DY260257; organism=Citrus clementina; type=EST; length=1038bp
GGAAAAAAATAAATATTTACCTATTTCCGAGTTGAAAAAACCAACGGAAG
AAGAAAAATGGCGGATCCGCCTCCGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCCCTGTTATGAGGTCACTGGGTCCGAACCCCCCTGAGGCTGA
GCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCCAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAA
TGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CCAGTAATGACCCCCACCCACCCATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCCCTTTTACAATTTTTAATTTGATAGTCCT
GAGGGTCCGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGAT
GGTGTAGGAAGAATGTTGTCCCCCCCGTCAATATGTCTTGTGACTCCCCA
AACTTTTCCGTTTTTATTATTTTAGTTGTTCTGCTGTTCCCAAACAAAAA
AAAAAAAAAAAACCCCACCTTCCCTGGACCAAGTTGGCCTTCTAAAAAAG
GCCTTGCCTATCAATTTTGTTGGCCACCAACCCGGCCCCCATCCCCCCCA
AACAAAATCCTTTTTTTTCCCCCCCCCGCTGAAACCCCCCAAAAGGGGAG
CCTATTAACGGGGCCCCAACCGGGTTCCCCCGGCCCCCCCCGGCCCGGGG
TCCCCAAACCCCCTGCGGTGCCCCTTGCCCCCAAAATAAAAAACATCCCC
CCCCCGGTTACACACACCCCCCCCCCCCCCCCCCAACA
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