DY260257

Overview
NameDY260257
Unique NameDY260257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1038
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.679e-12
Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   82 QISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            ++ +    F + DKDG G +TT E   +   L  NP    L+ +I   D + +  I+F EF+  +A        E++LK  F+++D D +GFIS  EL  V+     TNL +    + VD+ I E D D DG+I+++EF+ ++
Sbjct:   26 ELKKLYRRFQMLDKDGSGTLTTDEFLSIP-DLALNPL---LERVIQIFDQNKDNEIEFFEFVGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVLKMMVGTNLNDVQLQQIVDKTIIEGDYDKDGKISFDEFIHMI 164          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CML20_ORYSJ (Probable calcium-binding protein CML20 OS=Oryza sativa subsp. japonica GN=CML20 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = 1
Query:   91 EFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            E    F  FD DGDG I+  E+       G +  EAE  +M+   D DG+G +   E      R + +    + L+ AF  +D+D NG I+A ELR  +  L   G  LT E+  E++   D DGDG I+++EF  +M  Q
Sbjct:   43 ELIRVFRCFDTDGDGLISAAEM---REFYGCSVDEAE--EMVAAADRDGDGFVSIEEL-----RAVMEGGGLDALRAAFDEYDEDGNGVITAEELRRALRRLNLDGMDLTAEQCAEIVAAVDSDGDGVISFDEFKAMMSKQ 173          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 39/143 (27.27%), Postives = 82/143 (57.34%), Query Frame = 1
Query:   76 DDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEEL-KEAFRVFDKDQNGFISAAELRHVM--TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            D +I+  +  F   D D  G ++++E+   ++ +G      ++  ++ ++D++ +G I + +FL   A   K T+ ++E+    F+ FD D NG IS  EL+ +    ++   L D+ +D +++E D++GDG+I++ EF+ +M
Sbjct:  369 DVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFL--AATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 509          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CANB2_MOUSE (Calcineurin subunit B type 2 OS=Mus musculus GN=Ppp3r2 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   79 DQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            ++I    ++F   D D  G ++ +E    +  L  NP    + D+    D DGNG +DF EF+   ++       E++L+ AFR++D D +GFIS  EL  V+      NL +    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   18 EEIRRLGKSFRKLDLDKSGSLSIEEFMR-LPELQQNPLVGRVIDIF---DTDGNGEVDFHEFIVGTSQFSVKGDEEQKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDWQLQQLVDKSILVLDKDGDGRISFEEFSDVV 157          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: MLRS_CHICK (Myosin regulatory light chain 2, skeletal muscle isoform OS=Gallus gallus GN=MYLPF PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.740e-12
Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = 1
Query:   82 QISEFKEAFSLFDKDGDGCITTKELGPVMRSLGP-NPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            QI EFKEAF++ D++ DG I   +L     ++G  N    EL  MI E     +G I+F  FL +   K+K    E+ +  AF+V D D  G I  + L  ++T   ++ T EE+  M      D  G ++Y+    V+
Sbjct:   25 QIQEFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 159          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana GN=CML39 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.740e-12
Identity = 43/144 (29.86%), Postives = 77/144 (53.47%), Query Frame = 1
Query:   76 DDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELK----EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +++  + +  F+  D + DG I+ +EL    ++LG    + E +  +   D DG+G +D  EF  L+  K  D  +EEE K    EAFR++  D    I+   L+ ++  LGE  T ++   MI+  D++ DG ++++EF  +M
Sbjct:   17 EEKNRDLEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI--KGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNADGVLSFDEFALMM 158          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.740e-12
Identity = 44/141 (31.21%), Postives = 75/141 (53.19%), Query Frame = 1
Query:   76 DDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEE-ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +D+  E +  FS  D + DG I+ +EL     +LG    + E    +   D DG+G +DF EF  L+  K+ D   ++ ELK AFR++  +    I+   L+ ++  LGE  T ++   MI   D++ DG ++++EF  +M
Sbjct:   38 EDKNRELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI--KVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNADGVLSFDEFALMM 176          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.740e-12
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   79 DQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            D+I    + F   D D  G ++  E    +  L  NP    +Q +I+  DADGNG +DF EF+  +++         +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   18 DEIRRLGKRFRKLDLDNSGALSIDEFMS-LPELQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: ALLB3_BETVE (Calcium-binding allergen Bet v 3 OS=Betula verrucosa GN=BETVIII PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.884e-12
Identity = 47/157 (29.94%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   97 KEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTH----------SEEELKEA------------FRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +  F LFDK+ DG IT  EL   +  LG     +EL+  +     +GN  + F +F++L  + + D++          +EE+++++            F+VFD+D +G+ISA EL+ V+  LG  E    + V++MI   D + DG++++ EF  +M
Sbjct:   42 RRIFDLFDKNSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL-HQSLNDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYISARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMM 197          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CML32_ORYSJ (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica GN=CML32 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.379e-12
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = 1
Query:   97 KEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT-------------------HSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            +  F LFD++GDG IT  EL   + +LG       L   ++    +G   + F +F + + R + D                      EEE++EAF+VFD D +GFISA+EL+ V+  LG  E  +   V EMI   D + DG++++ EF  +M
Sbjct:   36 RRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDF-DALHRALGDALFGSLDGAAAAGEPGGGGGDEEEEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMM 188          
The following BLAST results are available for this feature:
BLAST of DY260257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 465
Match NameE-valueIdentityDescription
CANB1_DICDI1.679e-1232.87Calcineurin subunit B type 1 OS=Dictyostelium disc... [more]
CML20_ORYSJ2.863e-1234.75Probable calcium-binding protein CML20 OS=Oryza sa... [more]
CDPK2_PLAFK2.863e-1227.27Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CANB2_MOUSE2.863e-1233.33Calcineurin subunit B type 2 OS=Mus musculus GN=Pp... [more]
MLRS_CHICK3.740e-1232.37Myosin regulatory light chain 2, skeletal muscle i... [more]
CML39_ARATH3.740e-1229.86Calcium-binding protein CML39 OS=Arabidopsis thali... [more]
CML38_ARATH3.740e-1231.21Calcium-binding protein CML38 OS=Arabidopsis thali... [more]
CANB1_DROME3.740e-1233.33Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
ALLB3_BETVE4.884e-1229.94Calcium-binding allergen Bet v 3 OS=Betula verruco... [more]
CML32_ORYSJ6.379e-1232.47Probable calcium-binding protein CML32 OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260257 ID=DY260257; Name=DY260257; organism=Citrus clementina; type=EST; length=1038bp
GGAAAAAAATAAATATTTACCTATTTCCGAGTTGAAAAAACCAACGGAAG
AAGAAAAATGGCGGATCCGCCTCCGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCCCTGTTATGAGGTCACTGGGTCCGAACCCCCCTGAGGCTGA
GCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCCAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAA
TGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CCAGTAATGACCCCCACCCACCCATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCCCTTTTACAATTTTTAATTTGATAGTCCT
GAGGGTCCGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGAT
GGTGTAGGAAGAATGTTGTCCCCCCCGTCAATATGTCTTGTGACTCCCCA
AACTTTTCCGTTTTTATTATTTTAGTTGTTCTGCTGTTCCCAAACAAAAA
AAAAAAAAAAAACCCCACCTTCCCTGGACCAAGTTGGCCTTCTAAAAAAG
GCCTTGCCTATCAATTTTGTTGGCCACCAACCCGGCCCCCATCCCCCCCA
AACAAAATCCTTTTTTTTCCCCCCCCCGCTGAAACCCCCCAAAAGGGGAG
CCTATTAACGGGGCCCCAACCGGGTTCCCCCGGCCCCCCCCGGCCCGGGG
TCCCCAAACCCCCTGCGGTGCCCCTTGCCCCCAAAATAAAAAACATCCCC
CCCCCGGTTACACACACCCCCCCCCCCCCCCCCCAACA
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