DY260257

Overview
NameDY260257
Unique NameDY260257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1038
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 9.063e-67
Identity = 125/149 (83.89%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QISEFKEAFSLFDKDGDG ITTKELG VMRSLG NP E ELQDMINEVDADGNGTIDFPEFL +MARKM+DT SEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M+++
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 9.063e-67
Identity = 125/146 (85.62%), Postives = 135/146 (92.47%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 495
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKMK+T SEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 1.184e-66
Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL+LMARKMKDT +EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMA+
Sbjct:    1 MADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 253.447 bits (646), Expect = 1.546e-66
Identity = 126/149 (84.56%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL+LMARKMKDT +EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMA+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 253.062 bits (645), Expect = 2.019e-66
Identity = 124/149 (83.22%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            M D   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKMK+T SEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M ++
Sbjct:    1 MTDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 3.444e-66
Identity = 124/149 (83.22%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADG+GTIDFPEFL +MARKMKDT SEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M ++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 3.444e-66
Identity = 124/149 (83.22%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDT SEEE++EAFRVFDKD NG+ISAAELR+VMTNLGEKLTDE VDEMIREAD+DGDGQ+NYEEFV++M A+
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 3.444e-66
Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MA+    +QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVD DG+GTIDFPEFL LM+RKM DT +EEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM++
Sbjct:    1 MAEALTHEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 251.521 bits (641), Expect = 5.875e-66
Identity = 124/149 (83.22%), Postives = 135/149 (90.60%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVD DGNGTIDFPEFL +MARKMK+T SEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYEEFV +M ++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 7.672e-66
Identity = 123/142 (86.62%), Postives = 132/142 (92.96%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 483
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDT SEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142          
The following BLAST results are available for this feature:
BLAST of DY260257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 465
Match NameE-valueIdentityDescription
CALM_PAXIN9.063e-6783.89Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALMB_HALRO9.063e-6785.62Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALM_STYLE1.184e-6685.23Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_TETPY1.546e-6684.56Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_HALOK2.019e-6683.22Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM_PATSP3.444e-6683.22Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_OREMO3.444e-6683.22Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]
CALM_EUGGR3.444e-6684.56Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_SUBDO5.875e-6683.22Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALMA_ARBPU7.672e-6686.62Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260257 ID=DY260257; Name=DY260257; organism=Citrus clementina; type=EST; length=1038bp
GGAAAAAAATAAATATTTACCTATTTCCGAGTTGAAAAAACCAACGGAAG
AAGAAAAATGGCGGATCCGCCTCCGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCCCTGTTATGAGGTCACTGGGTCCGAACCCCCCTGAGGCTGA
GCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCCAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAA
TGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CCAGTAATGACCCCCACCCACCCATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCCCTTTTACAATTTTTAATTTGATAGTCCT
GAGGGTCCGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGAT
GGTGTAGGAAGAATGTTGTCCCCCCCGTCAATATGTCTTGTGACTCCCCA
AACTTTTCCGTTTTTATTATTTTAGTTGTTCTGCTGTTCCCAAACAAAAA
AAAAAAAAAAAACCCCACCTTCCCTGGACCAAGTTGGCCTTCTAAAAAAG
GCCTTGCCTATCAATTTTGTTGGCCACCAACCCGGCCCCCATCCCCCCCA
AACAAAATCCTTTTTTTTCCCCCCCCCGCTGAAACCCCCCAAAAGGGGAG
CCTATTAACGGGGCCCCAACCGGGTTCCCCCGGCCCCCCCCGGCCCGGGG
TCCCCAAACCCCCTGCGGTGCCCCTTGCCCCCAAAATAAAAAACATCCCC
CCCCCGGTTACACACACCCCCCCCCCCCCCCCCCAACA
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