DY260257

Overview
NameDY260257
Unique NameDY260257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1038
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 250.366 bits (638), Expect = 1.309e-65
Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            M D   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKM DT +EEE++EAF+VFDKD NGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQ+NY+EFVK+M+++
Sbjct:    1 MVDSLTEEQIAEFKEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM2_BRAFL (Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=2 SV=4)

HSP 1 Score: 250.366 bits (638), Expect = 1.309e-65
Identity = 123/149 (82.55%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDG+G ITTKELG VMRSLG NP E ELQDMINEVDADGNGTIDFPEFL +MARKMKDT SEEE++EAF+VFDKD NGFISAAELRHVMTN GEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M ++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGNGNITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDKDGNGFISAAELRHVMTNPGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 2.232e-65
Identity = 124/149 (83.22%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEA SLFDKDGDG ITTKELG VMRS+G NP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDT SEEE+ EAF+ FDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM++
Sbjct:    1 MADQLTEEQIAEFKEAGSLFDKDGDGTITTKELGTVMRSVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 248.825 bits (634), Expect = 3.808e-65
Identity = 123/149 (82.55%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QISEFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINE+D DGNGTIDFPEFL LMARK+KDT +EEEL EAFRVFD+D +G+ISA ELRHVMTNLGEKLT+EEVDEMIREAD+DGDGQINYEEFVK+M+A+
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 3.808e-65
Identity = 123/149 (82.55%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QISEFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINE+D DGNGTIDFPEFL LMARK+KDT +EEEL EAFRVFD+D +G+ISA ELRHVMTNLGEKLT+EEVDEMIREAD+DGDGQINYEEFVK+M+A+
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 6.495e-65
Identity = 121/136 (88.97%), Postives = 129/136 (94.85%), Query Frame = 1
Query:   79 DQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 486
            +QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKMKDT SEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV
Sbjct:    1 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 136          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 1.447e-64
Identity = 122/149 (81.88%), Postives = 137/149 (91.95%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++QI+EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAEL  MINEVDADGNGTIDFPEFL +MARKMKD+ SEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKL+++EV+EMIREADVDGDGQINYEEFVK+MM++
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLSEDEVEEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 4.210e-64
Identity = 120/138 (86.96%), Postives = 129/138 (93.48%), Query Frame = 1
Query:   91 EFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            EFKEAFSLFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL +MARKMK+T SEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M ++
Sbjct:    1 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 138          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 244.202 bits (622), Expect = 9.379e-64
Identity = 120/149 (80.54%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MA+   ++QI+EFKEAF+LFDKDGDG ITTKELG VMRSLG NP EAELQDMINEVDADGNGTIDFPEFL+LMARKMK+  SEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG INYEEFV++M+++
Sbjct:    1 MAEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of DY260257 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 9.379e-64
Identity = 114/149 (76.51%), Postives = 136/149 (91.28%), Query Frame = 1
Query:   58 MADPPPDDQISEFKEAFSLFDKDGDGCITTKELGPVMRSLGPNPPEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTHSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAQ 504
            MAD   ++Q++EFKEAFSLFDKDGDGCITT+ELG VMRSLG NP EAEL+DM++E+D DGNGT+DFPEFL +MARKMKDT +EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V++++
Sbjct:    1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149          
The following BLAST results are available for this feature:
BLAST of DY260257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 465
Match NameE-valueIdentityDescription
CALM_PHYPO1.309e-6581.88Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM2_BRAFL1.309e-6582.55Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=... [more]
CALM_ACHKL2.232e-6583.22Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALM_PLAFA3.808e-6582.55Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF73.808e-6582.55Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_ORYLA6.495e-6588.97Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALM_BLAEM1.447e-6481.88Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CALMB_ARBPU4.210e-6486.96Calmodulin-beta (Fragment) OS=Arbacia punctulata P... [more]
CALM_PARTE9.379e-6480.54Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALL3_HUMAN9.379e-6476.51Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YO09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260257 ID=DY260257; Name=DY260257; organism=Citrus clementina; type=EST; length=1038bp
GGAAAAAAATAAATATTTACCTATTTCCGAGTTGAAAAAACCAACGGAAG
AAGAAAAATGGCGGATCCGCCTCCGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCCCTGTTATGAGGTCACTGGGTCCGAACCCCCCTGAGGCTGA
GCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCCAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAA
TGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CCAGTAATGACCCCCACCCACCCATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCCCTTTTACAATTTTTAATTTGATAGTCCT
GAGGGTCCGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGAT
GGTGTAGGAAGAATGTTGTCCCCCCCGTCAATATGTCTTGTGACTCCCCA
AACTTTTCCGTTTTTATTATTTTAGTTGTTCTGCTGTTCCCAAACAAAAA
AAAAAAAAAAAACCCCACCTTCCCTGGACCAAGTTGGCCTTCTAAAAAAG
GCCTTGCCTATCAATTTTGTTGGCCACCAACCCGGCCCCCATCCCCCCCA
AACAAAATCCTTTTTTTTCCCCCCCCCGCTGAAACCCCCCAAAAGGGGAG
CCTATTAACGGGGCCCCAACCGGGTTCCCCCGGCCCCCCCCGGCCCGGGG
TCCCCAAACCCCCTGCGGTGCCCCTTGCCCCCAAAATAAAAAACATCCCC
CCCCCGGTTACACACACCCCCCCCCCCCCCCCCCAACA
back to top