DY260259
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_THEAC (50S ribosomal protein L10e OS=Thermoplasma acidophilum GN=rpl10e PE=3 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 5.893e-20 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 304 FHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPK 543 F+L+V +P HVL +KM + AGADR+ +GMR AFG+P GT ARV V++ ++++ + AL A + P P K Sbjct: 82 FYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYPDDVIMIARTDEAHAKELKTALRKAAIKLPTPCK 161 HSP 2 Score: 55.8398 bits (133), Expect = 5.893e-20 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +PAR Y +I Y + F GVP P+I + G +KK +FP + LV+ E + ALEAAR++ N+ M + AG D F Sbjct: 4 KPARMYSRITGPAYTRKEFMGGVPYPKITTFVQGNQKK---DFPIEMRLVAEEPCQIRHTALEAARVSVNRRMTEAAGLDYF 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_THEVO (50S ribosomal protein L10e OS=Thermoplasma volcanium GN=rpl10e PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.297e-19 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 304 FHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPK 543 F+L+V +P HVL +KM + AGADR+ +GMR AFG+P GT ARV V++ ++++ + AL A + P P K Sbjct: 82 FYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYQNDVIMIGRTDEAHAHELKIALKKAAIKLPTPCK 161 HSP 2 Score: 56.225 bits (134), Expect = 1.297e-19 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +PAR Y +I Y + F GVP P+I + G +K+ +FP + L++ E V ALEAAR++ N+ M + AG D F Sbjct: 4 KPARMYTRITGPAYTRKEFMGGVPYPKITTFVQGNQKR---DFPIEMQLIAMESCQVRHTALEAARVSVNRRMTEAAGLDNF 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METBU (50S ribosomal protein L10e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl10e PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.298e-19 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 G+ FH+++RV+P VL NK + AGADR+ +GMR A+GK T ARV+ Q + ++ + + A++AL A + P P Sbjct: 78 GRSGFHMKLRVYPHEVLRENKQATGAGADRVSSGMRAAYGKNVSTAARVSARQKIFTISVNKEHFIIAKDALRRAGQKLPTP 159 HSP 2 Score: 54.299 bits (129), Expect = 1.298e-19 Identity = 28/83 (33.73%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 57 RRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 R+PA YR + ++ + + ++ GVP Q+ +D+G K +FP + L++ E+ + ALEAARI N+ M AG+ F Sbjct: 3 RKPASMYRNVKSRSFTRRKYMGGVPGSQVIHFDMGNKTA---DFPVKITLLADERCQIRHTALEAARITANRAMTTAAGRSGF 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METMP (50S ribosomal protein L10e OS=Methanococcus maripaludis GN=rpl10e PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.298e-19 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 G+ + +RV+P +L NKM + AGADR+ GMR +FGK GT A+V GQ ++++ A+EAL + P Sbjct: 78 GRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLP 157 HSP 2 Score: 58.5362 bits (140), Expect = 1.298e-19 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAFPF 311 RPARCYR I + Y + + R VP P++ Y +G EFP V LVS + ALE++RIA NKY+ G+ + F Sbjct: 4 RPARCYRTIERRSYTRKEYVRAVPQPKVVHYVMGNPSA---EFPVQVQLVSKSDILIRHNALESSRIAGNKYILSECGRTGYLF 84
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_UNCMA (50S ribosomal protein L10e OS=Uncultured methanogenic archaeon RC-I GN=rpl10e PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.688e-19 Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 GK + +VRV+P VL NK + AGADR+ GMR AFGK GT ARV GQ + ++ +N A+EA+ A + P P Sbjct: 78 GKTNYRFKVRVYPHQVLRENKQATGAGADRVSDGMRRAFGKAVGTAARVYEGQGVFTIWVNRANFEKAKEAMRRAGHKLPTP 159 HSP 2 Score: 53.1434 bits (126), Expect = 1.688e-19 Identity = 28/87 (32.18%), Postives = 45/87 (51.72%), Query Frame = 3 Query: 51 LGRRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAFPF 311 + R+P R Y++ Y + + GVP ++ +D+G +E P V LV E + +ALEAARI+ N+Y+ GK + F Sbjct: 1 MARKPGRMYKKFSGPAYTRREYMGGVPGVKVAQFDMGNL---TEELPIAVTLVVNETCQIRHDALEAARISANRYLLNDVGKTNYRF 84
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_CALMQ (50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl10e PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.194e-19 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 304 FHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 F+L++ +P HV+ NKML+ AGADRLQ GMR AFG PTG ++ G+VL+ V +D N A+EAL A+ + P P Sbjct: 85 FYLKIIKYPHHVIRENKMLAMAGADRLQEGMRLAFGVPTGRAIQIEPGEVLMIVEVEDRNITHAKEALNRARAKLPLP 162 HSP 2 Score: 44.2838 bits (103), Expect = 2.194e-19 Identity = 27/76 (35.53%), Postives = 41/76 (53.95%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVG-MKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQ 284 RPARCY++I +PY + ++ G P QI +++G K K + F L E + ALEAAR KY+++ Sbjct: 4 RPARCYKRI-KRPYTRLKYIHGAPYVQIPRFEMGATKAKDRERFTSVAVLRVLEGGQIRVNALEAARQMAYKYLSK 78
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METBF (50S ribosomal protein L10e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl10e PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.196e-19 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 GKM +++++RV+P VL NK + AGADR+ +GMR AFGK GT ARV Q + +V + N + A++AL A + P P Sbjct: 79 GKMGYYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNPFQKIFTVAVEKQNFVAAKKALWHAGQKLPTP 160 HSP 2 Score: 51.2174 bits (121), Expect = 2.196e-19 Identity = 27/80 (33.75%), Postives = 43/80 (53.75%), Query Frame = 3 Query: 57 RRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGK 296 R+P YR + + + + ++ GVP Q+ YD+G K FP + L+ EK + ALEAARI N+++ + GK Sbjct: 3 RKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKAN--TSFPIKLSLLVEEKCQIRHTALEAARITANRHLIEDTGK 80
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_THEPD (50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5) GN=rpl10e PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.861e-19 Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPK 543 G+ F LRV V P H+L NKM++ AGADRLQ GMR +FG P G ARV GQ+++ V N A+EAL A + P P + Sbjct: 78 GEANFFLRVAVFPHHILRENKMMAMAGADRLQDGMRLSFGTPVGRAARVEAGQIVMLVKVDAKNIDHAKEALRRAASKIPLPSR 161 HSP 2 Score: 44.2838 bits (103), Expect = 2.861e-19 Identity = 27/82 (32.93%), Postives = 37/82 (45.12%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 RP RCYR PY + + + P I +D+G K F + LV + + ALEAAR NKY+ G+ F Sbjct: 4 RPGRCYRHFGTPPYTRLEYIKSNPPVLIPKFDLGNPK---GNFNTVLKLVVMRPGQIRANALEAARQHANKYLTAKVGEANF 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METM7 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl10e PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 6.283e-19 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 G+ + +RV+P +L NKM + AGADR+ GMR +FGK GT A+V GQ ++++ A+EAL + P Sbjct: 78 GRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLP 157 HSP 2 Score: 56.225 bits (134), Expect = 6.283e-19 Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAFPF 311 RPARCYR + Y + + R VP P++ Y +G EFP V L+S + ALE++RIA NKY+ + G+ + F Sbjct: 4 RPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLISKSDILIRHNALESSRIAGNKYILRECGRTGYLF 84
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METM6 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl10e PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 6.283e-19 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 G+ + +RV+P +L NKM + AGADR+ GMR +FGK GT A+V GQ ++++ A+EAL + P Sbjct: 78 GRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLP 157 HSP 2 Score: 56.225 bits (134), Expect = 6.283e-19 Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAFPF 311 RPARCYR + Y + + R VP P++ Y +G EFP V L+S + ALE++RIA NKY+ + G+ + F Sbjct: 4 RPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLISKSDILIRHNALESSRIAGNKYILRECGRTGYLF 84 The following BLAST results are available for this feature:
BLAST of DY260259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260259 ID=DY260259; Name=DY260259; organism=Citrus clementina; type=EST; length=1115bpback to top |