DY260259
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METTH (50S ribosomal protein L10e OS=Methanobacterium thermoautotrophicum GN=rpl10e PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.308e-19 Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 G+M +HL++RV+P H++ N M + AGADR+Q GMR AFGKP T A V Q ++++ N A+EAL A +FP P Sbjct: 66 GRMGYHLKIRVYPHHIVRENPMATGAGADRVQDGMRKAFGKPVSTVALVKKNQKIITIETNKKNFKDAKEALRRAAMKFPVP 147 HSP 2 Score: 40.4318 bits (93), Expect = 6.308e-19 Identity = 22/68 (32.35%), Postives = 36/68 (52.94%), Query Frame = 3 Query: 93 KPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGK 296 + Y + + + +P +I YD+G EFP + + ++ ALEAARIA N+YM + AG+ Sbjct: 3 RAYTRREYIKKIPGSKIVQYDMGNLSA---EFPISLSVAVKAPTQITHNALEAARIASNRYMQRRAGR 67
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METM5 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl10e PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.063e-18 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 G+ + +RV+P +L NKM + AGADR+ GMR +FGK GT A+V GQ ++++ A+EAL + P Sbjct: 78 GRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPERFYAAKEALRRCSMKLP 157 HSP 2 Score: 55.4546 bits (132), Expect = 1.063e-18 Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAFPF 311 RPARCYR + Y + + R VP P++ Y +G EFP V LVS + ALE++RIA NKY+ G+ + F Sbjct: 4 RPARCYRTTERRSYTRKEYVRAVPQPKVVHYVMGNSSV---EFPVEVQLVSKSDILIRHNALESSRIAGNKYIMGECGRTGYLF 84
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METPE (50S ribosomal protein L10e OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl10e PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.382e-18 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPK 543 G+ FH ++R +P HVL NK + AGADR+ GMR AFGK GT ARV Q + +V + +++AL ++ P P + Sbjct: 78 GRANFHFKIRTYPHHVLRENKQATGAGADRVSEGMRMAFGKAVGTAARVQPKQKVFTVYTNEQYIEKSKDALRHGGYKLPSPAR 161 HSP 2 Score: 50.0618 bits (118), Expect = 1.382e-18 Identity = 29/85 (34.12%), Postives = 44/85 (51.76%), Query Frame = 3 Query: 57 RRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAFPF 311 R+P + YR + K Y + ++ GVP +I +++G + EFP + L E + ALEAARIA N+ M G+ F F Sbjct: 3 RKPGKMYRNLAKKAYTRRKYMGGVPGSKIVQFEMGNLSQ---EFPVEISLEVLESCQIRHTALEAARIAINRKMMDQVGRANFHF 84
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_PICTO (50S ribosomal protein L10e OS=Picrophilus torridus GN=rpl10e PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.796e-18 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPK 543 G + L++R +P V+ +KM + AGADR+ +GMR AFG+P GT ARV GQ+++ +N+ ++AL A + P P K Sbjct: 78 GSDNYFLQIRPYPHQVIREHKMATGAGADRISSGMRAAFGRPVGTAARVYPGQIIMVGRVDRNNAKLLKDALHKASIKLPTPCK 161 HSP 2 Score: 50.0618 bits (118), Expect = 1.796e-18 Identity = 29/82 (35.37%), Postives = 44/82 (53.66%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 +PAR Y +I Y + F GVP P+I + G +KK +F + LV+ E + ALEAAR++ N+ + AG D + Sbjct: 4 KPARMYTRITGPAYTRKEFMGGVPYPKITTFIQGNQKK---DFEIEMMLVAEEACQIRHTALEAARVSVNRKLLDAAGSDNY 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METS5 (50S ribosomal protein L10e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl10e PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 3.037e-18 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 304 FHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVA-IGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 F+L V +P HV+ NKM++ AGADRLQ GMR +FGKP GT AR+ +G +++++ K + A++A A + P Sbjct: 83 FYLYVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARITKLGDLIMAIRVKKEHLEFAKKAFKVASSKLP 159 HSP 2 Score: 50.447 bits (119), Expect = 3.037e-18 Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKD 299 RP RCYR Y + + GVP P+I + +G KK ++ F V L++ + + ALEAAR+ K M G + Sbjct: 4 RPGRCYRHFSGPAYTRKEYIPGVPQPKITKFTMGDHKK---DYDFEVRLLTKQIGQIRHNALEAARVIALKQMTSMVGNE 80
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METLZ (50S ribosomal protein L10e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl10e PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.132e-17 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 G+ FHL++R +P HVL +K + AGADR+ GMR AFGK GT ARVA Q + +V A++AL + ++ P P Sbjct: 78 GRNNFHLKIRAYPHHVLREHKQATGAGADRVSEGMRLAFGKAVGTAARVAPRQRVFTVWTTPQYVDQAKDALLHSGYKLPTP 159 HSP 2 Score: 48.9062 bits (115), Expect = 1.132e-17 Identity = 26/83 (31.33%), Postives = 45/83 (54.22%), Query Frame = 3 Query: 57 RRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 R+PAR YR + K Y + + GVP ++ +D+G ++FP + L + E + A+EAARI N+ + + G++ F Sbjct: 3 RKPARMYRNLAKKAYCRREYMGGVPGLKVVQFDMGNLS---EDFPVAIHLEALEACQIRHTAMEAARINMNRRLMKTVGRNNF 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METMJ (50S ribosomal protein L10e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.471e-17 Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGPPK 543 G+ FHL++R P HVL NK + AGADR+ GMR AFGK GT ARV GQ + SV A+ +L ++ P P + Sbjct: 78 GRANFHLKIRTFPHHVLRENKQATGAGADRVSEGMRLAFGKAVGTAARVEKGQKVFSVWTSPQYVDKAKVSLKRGIYKLPTPAR 161 HSP 2 Score: 46.595 bits (109), Expect = 1.471e-17 Identity = 26/83 (31.33%), Postives = 44/83 (53.01%), Query Frame = 3 Query: 57 RRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKDAF 305 R+PA+ YR + K Y + + GVP +I +D+G +++P + +V E + ALEAARI N+ + + G+ F Sbjct: 3 RKPAKMYRNLAKKAYTRREYMGGVPGSKIVQFDMG---NLTEDYPVELSIVVDETCQIRHTALEAARIGINRQLQKEVGRANF 82
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_SULTO (50S ribosomal protein L10e OS=Sulfolobus tokodaii GN=rpl10e PE=3 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 2.026e-16 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 304 FHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARV-AIGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 F L V +P HV+ NKM++ AGADRLQ GMR +FGKP GT AR+ +G +++ K + A++A A + P Sbjct: 83 FALIVLKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARIERLGDIIMIAKVKKEHLEIAKKAFEAAASKIP 159 HSP 2 Score: 47.7506 bits (112), Expect = 2.026e-16 Identity = 27/80 (33.75%), Postives = 38/80 (47.50%), Query Frame = 3 Query: 60 RPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGKD 299 RP RCYR Y + + GVP P+I + +G D + + LV+ EK + ALEAAR+ K + G D Sbjct: 4 RPGRCYRHFSGPAYTRKEYIPGVPMPKITKFTMGNVNGNYD---YELRLVALEKGQIRHNALEAARVLALKQLTNKTGSD 80
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.639e-16 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFPGP 537 G+M +HL++R +P HVL NK + AGADR+ GMR AFGK GT AR Q + +V ++ ++AL + P P Sbjct: 78 GRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTVFSNPASVEKIKDALRHGGHKLPSP 159 HSP 2 Score: 44.2838 bits (103), Expect = 2.639e-16 Identity = 25/80 (31.25%), Postives = 41/80 (51.25%), Query Frame = 3 Query: 57 RRPARCYRQIINKPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGK 296 R+P YR + K Y + + G+P ++ +D+G EFP V LV E + ALEAAR++ N+ + + G+ Sbjct: 3 RKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMG---NLTSEFPMEVSLVVDESCQIRHSALEAARMSINRKLNKELGR 79
BLAST of DY260259 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.278e-15 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 292 GKMPFHLRVRVHPFHVLPINKMLSCAGADRLQTGMRGAFGKPTGTCARVAIGQVLLSVPCKDSNSLPAQEALPPAKFQFP 531 GK+ + L++R +P H++ N M + AGADR+Q+GMRGAFGK + A V Q +++ + + A+ AL A + P Sbjct: 66 GKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLP 145 HSP 2 Score: 46.2098 bits (108), Expect = 1.278e-15 Identity = 26/68 (38.24%), Postives = 38/68 (55.88%), Query Frame = 3 Query: 93 KPYPKSRFCRGVPDPQIRIYDVGMKKKGVDEFPFCVPLVSWEKENVSSEALEAARIACNKYMAQFAGK 296 +PY + + R +P +I YD+G EFP V L E ++S +LEAARIA N+Y+ + GK Sbjct: 3 RPYTRKDYIRKIPASKIVQYDMGNLS---GEFPLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGK 67 The following BLAST results are available for this feature:
BLAST of DY260259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260259 ID=DY260259; Name=DY260259; organism=Citrus clementina; type=EST; length=1115bpback to top |