DY260260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260260 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.957e-19 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 425 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRPLGYGYVNFSNAQEAARALEMLNFPPSDGKPIRVMYSPRDPSPPKSGPGKIFLKNPEKGLD 724 +LYVGDL+ +VT+ LY F G + R+CRD TR PLGYGYVNF +A AL +NF +GKP R+M+S D KSG G IF+KN +K +D Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSID 118
BLAST of DY260260 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.957e-19 Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 425 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRPLGYGYVNFSNAQEAARALEMLNFPPSDGKPIRVMYSPRDPSPPKSGPGKIFLKNPEKGLD 724 +LYVGDL+ +VT+ LY F G + R+CRD TR PLGYGYVNF +A AL +NF +GKP R+M+S D KSG G IF+KN +K +D Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSID 118
BLAST of DY260260 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.887e-19 Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 419 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRPLGYGYVNFSNAQEAARALEMLNFPPSDGKPIRVMYSPRDPSPPKSGPGKIFLKN 706 T SLYVGDL +VT+ LYD F + + SVR+C+D S+ R L YGY NF + Q+A A+E N +GK IRVM+S R P ++G G +F+KN Sbjct: 23 TASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKN 118 HSP 2 Score: 25.409 bits (54), Expect = 7.887e-19 Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 1 Query: 757 GNLPPCQVATDPHGPAKGLGI*PF*PEEA 843 GN+ C+VAT G ++G G F E+A Sbjct: 136 GNIVSCKVATLEDGKSRGYGFVQFEQEDA 164
BLAST of DY260260 vs. ExPASy Swiss-Prot
Match: PES4_YEAST (Protein PES4 OS=Saccharomyces cerevisiae GN=PES4 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.774e-12 Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 428 LYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRPLGYGYVNFSNAQEAARALEMLNFPPSDGKPIRVMYSPRDPSPPKSGPGKIFLKN 706 L++GDL VT+ L +F + VS +VC D T++ LG+GY+NF + +EA +A+E LN+ +GK IR+M S R+ + K+ +F N Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSN 185 The following BLAST results are available for this feature:
BLAST of DY260260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260260 ID=DY260260; Name=DY260260; organism=Citrus clementina; type=EST; length=1080bpback to top |