DY260262

Overview
NameDY260262
Unique NameDY260262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD4_MACFA (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Macaca fascicularis GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.631e-25
Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 3
Query:  153 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         +  R  L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG T+T+ +     + ++ +YAF  S+YPV+++LE H + +    +A  +T+ LGE L +
Sbjct:  208 VQELFESFSADGQKLTLLEFSDFLREEQKERDCTSELALELIDRYEPSDSGKL--RHVLSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHGHTLTSRILFKDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLS 409          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD4_PONAB (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Pongo abelii GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.194e-25
Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 3
Query:  153 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         +  R  L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG T+T+ +     + ++ +YAF  S+YPV+++LE H + +    +A  +T+ LGE L +
Sbjct:  208 VQELFESFSADGQKLTLLEFLDFLREEQKERDCTSELALELIDHYEPSDSGKL--RHVLSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHGHTLTSRILFKDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLS 409          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD4_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Homo sapiens GN=PLCD4 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.194e-25
Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 3
Query:  153 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         +  R  L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG T+T+ +     + ++ +YAF  S+YPV+++LE H + +    +A  +T+ LGE L +
Sbjct:  208 VQELFESFSADGQKLTLLEFLDFLQEEQKERDCTSELALELIDRYEPSDSGKL--RHVLSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHGHTLTSRILFKDVVATVAQYAFQTSDYPVILSLETHCSWEQQQTMARHLTEILGEQLLS 409          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD4_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Bos taurus GN=PLCD4 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.056e-24
Identity = 71/208 (34.13%), Postives = 119/208 (57.21%), Query Frame = 3
Query:  153 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            V+ +F+++S +G  +T+     FL E QKE + + + A  +ID     +   +  R  L+++ F  YL    GDI NP   P   ++ DMT P++HY+I + HN+YL G+QL    S    IRAL++G R +E+DIW     + + V HG T+T+ +     + +I +YAF  S+YPV+++LE+H + +    +   +T+ LG+ L T
Sbjct:  208 VQELFEKFSSDGQKLTLLEFVDFLQEEQKEGERASDLALELIDRYEPSESGKL--RHVLSMDGFLGYLCSKDGDIFNPTCHP---LYQDMTQPLNHYYINSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDIWDGPSGEPI-VYHGHTLTSRIPFKDVVAAIGQYAFQTSDYPVILSLENHCSWEQQEIIVRHLTEILGDQLLT 409          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLD3A_DANRE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-3-A OS=Danio rerio GN=plcd3a PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.802e-24
Identity = 77/219 (35.16%), Postives = 124/219 (56.62%), Query Frame = 3
Query:  159 SMFDQYSENG-TMTVDHLHRFLIEVQKEDKASKEDAQAIIDS--LRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLG-EILFTPGSEC-LKEFPPP 797
            ++F  YS NG  +T   L  FL + Q ED AS   A+++I +  L +    N+F  +      F  Y+    N   +P    V+ DM+ P++HY+I + HN+YLT +Q+ S  S  P IRAL +G R +ELD W   K + + + HG T+T+ V   + + +I +YAF AS YP++++LE+H + +  A +A+ +   LG ++L  P S+  LK+ P P
Sbjct:  235 AVFRHYSGNGCVLTTLELRDFLGD-QGED-ASLVHAKSLIQTFELNDWAQKNLFMTQN----GFTMYMLSKENDVFNPDHTHVYQDMSKPLAHYYISSSHNTYLTKDQVTSASSTEPYIRALNQGCRCVELDCWDGDKGEPI-IYHGHTLTSKVLFKEVIETIAQYAFKASPYPLILSLENHCSVEQQAIMAQQLQSILGKKLLAKPLSDLPLKQLPSP 446          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB2_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus GN=Plcb2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.992e-23
Identity = 75/211 (35.55%), Postives = 110/211 (52.13%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLS-PTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            MT +HL +F+ + Q++ +        A  E  QA+ID   E   +N+ QR  L+ E    +L G  N  L+  T  +H DMT P++HYFI + HN+YLT  Q +   S     + L  G R +ELD W     D   ++ HG TMT  +   + + +I E AF  S YPV+++ E+H+ +P   AK+AE      GE L T   E L+ FP
Sbjct:  236 MTKEHLTKFINQKQRDPRLNSLLFPPARPEQVQALIDKY-EPSGINV-QRGQLSPEGMVWFLCGPENSVLAHDTLRIHQDMTQPLNHYFINSSHNTYLTAGQFSGPSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDILFKEAVEAIAESAFKTSPYPVILSFENHVDSPRQQAKMAEYCRTMFGETLLT---EPLENFP 441          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCZ1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Mus musculus GN=Plcz1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.399e-23
Identity = 67/217 (30.88%), Postives = 116/217 (53.46%), Query Frame = 3
Query:  147 DAVKSMFDQYSENGTMTVDH-LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            + +  +F+ Y+EN  +  ++ L  FL + Q E +    D+  II+    ++ +     R +++E F +Y+F             V+ DM  P+S YFI + HN+YL  +Q+         + AL KG R +E+D W  S+ + + V HG T T+ +     +++I +YAFV S+YPVV++LE+H +P     +A ++  T G+ L    S+ L+EFP
Sbjct:   79 EEITEIFNTYTENRKILSENSLIEFLTQEQYEMEIDHSDSVEIINKYEPIEEVK--GERQMSIEGFARYMFSSECLLFKENCKTVYQDMNHPLSDYFISSSHNTYLISDQILGPSDIWGYVSALVKGCRCLEIDCWDGSQNEPI-VYHGYTFTSKLLFKTVVQAINKYAFVTSDYPVVLSLENHCSPGQQEVMASILQSTFGDFLL---SDMLEEFP 289          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PIP1_DROME (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase classes I and II OS=Drosophila melanogaster GN=Plc21C PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 3.399e-23
Identity = 70/213 (32.86%), Postives = 111/213 (52.11%), Query Frame = 3
Query:  153 VKSMFDQY---SENGTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL 755
            V+ +FD     S+   M++  L  FL + Q++ +        A+   A+ +I      K     Q+  L+L+ F +YL GD NP ++P+ + +  DM  P+SHYFI + HN+YLTG+QL    S     + L  G R +ELD W N + +   ++HG T    +     L +I E AF  SEYPV+++ E+H  P   AK+A    +  G++L
Sbjct:  226 VERLFDSIVGNSKRKCMSIAQLVEFLNKTQRDPRLNEILYPYANPARAKELIQQYEPNKFNA--QKGQLSLDGFLRYLMGDDNPIMAPSKLDLCDDMDQPMSHYFINSSHNTYLTGHQLTGKSSVEIYRQCLLAGCRCVELDFW-NGRTEEPVIVHGYTFVPEIFAKDVLEAIAESAFKTSEYPVILSFENHCNPRQQAKIANYCREIFGDML 435          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB2_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2 OS=Mus musculus GN=Plcb2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.797e-23
Identity = 73/211 (34.60%), Postives = 110/211 (52.13%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLS-PTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            MT +HL +F+ + Q++ +        A  E  Q +ID   E   +N+ QR  L+ E    +L G  N  L+  T ++H DMT P++HYFI + HN+YLT  Q +   S     + L  G R +ELD W     D   ++ HG TMT  +   + + +I E AF  S YPV+++ E+H+ +P   AK+AE      GE L T   + L+ FP
Sbjct:  236 MTKEHLTKFINQKQRDPRLNSLLFPPARPEQVQVLIDKY-EPSGINV-QRGQLSPEGMVWFLCGPENSVLAHDTLLIHQDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDILFKEAIEAIAESAFKTSPYPVILSFENHVDSPRQQAKMAEYCRSMFGETLLT---DPLENFP 441          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB2_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2 OS=Homo sapiens GN=PLCB2 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.291e-22
Identity = 71/211 (33.65%), Postives = 111/211 (52.61%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            MT +HL +F+ + Q++ +        A  +  Q +ID   E   +N  QR  L+ E    +L G  N  L+   ++ HHDMT P++HYFI + HN+YLT  Q +   S     + L  G R +ELD W     D   ++ HG TMT  +   + + +I E AF  S YP++++ E+H+ +P   AK+AE      G++L T   E L++FP
Sbjct:  236 MTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKY-EPSGINA-QRGQLSPEGMVWFLCGPENSVLAQDKLLLHHDMTQPLNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLT---EPLEKFP 441          
The following BLAST results are available for this feature:
BLAST of DY260262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PLCD4_MACFA3.631e-2535.101-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_PONAB6.194e-2535.101-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_HUMAN6.194e-2535.101-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_BOVIN1.056e-2434.131-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLD3A_DANRE1.802e-2435.161-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB2_RAT1.992e-2335.551-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_MOUSE3.399e-2330.881-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PIP1_DROME3.399e-2332.861-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB2_MOUSE5.797e-2334.601-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB2_HUMAN1.291e-2233.651-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260262 ID=DY260262; Name=DY260262; organism=Citrus clementina; type=EST; length=995bp
TTTCACAATCCCAAAACATTTTCAACATTCCCATCATTTTCACAGATTAC
CCTTTACTCAATTACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTG
CTTCTGCTTCCGGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACG
CCGTCAAGTCCATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTC
GATCACCTTCACCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTC
CAAAGAAGACGCGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACT
TGAATATCTTTCAACGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTAC
CTCTTCGGTGATATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCA
TGATATGACTGCCCCGGTGTCTCATTACTTTATATATACTGGCCACAATT
CCTATCTGACTGGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATC
ATACGTGCCCTGCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCC
AAATTCGAAGAAAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTG
CTCCAGTGGAACTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTT
GTTGCATCTGAGTATCCAGTTGTTATTACCCTAGAAGACCACCTTACTCC
AGATCTTCCNGCTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAA
TCCTGTTTACCCCTGGCTCAGAATGCCTAAAGGAATTCCCCCCCCCCAGA
ATCACTGAAGAGACGGAACATCCTTTCACCCAACCCGCCAAGGAATACCT
TGAGGCTAAAGAAGAAAAAGGAAAAAGAAAACCATTCCCCGAGGGGTAAA
GGGTTCCGCTGAAGAAAAAGCTTGGGGAAAAGAAGGTCCCCACCCTAAAA
CCCCTTAAAAGTGGCCGTGAAAAGGGAAGATTTTTGAAGGGAGGA
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