DY260262

Overview
NameDY260262
Unique NameDY260262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 OS=Homo sapiens GN=PLCD1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.428e-21
Identity = 74/237 (31.22%), Postives = 112/237 (47.26%), Query Frame = 3
Query:  189 TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSECLKEFPPPRITEETEHPFTQPAKEYLEAKEEKGKRKPFPEG 896
            T++VD L  FL   Q+E+ A    A ++I+     +      +R +  + F  YL        S     V+ DM  P+SHY + + HN+YL  +QL    S    IRAL KG R +ELD W    ++ + + HG T T+ +     LR+I++YAF AS YPV+++LE+H T +    +A  +   LG +L           P   +T     P     K  L+ K+  G   P  EG
Sbjct:  227 TLSVDQLVTFLQHQQREEAAGPALALSLIERYEPSETAKA--QRQMTKDGFLMYLLSADGSAFSLAHRRVYQDMGQPLSHYLVSSSHNTYLLEDQLAGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCTLEQQRVMARHLHAILGPMLLNR--------PLDGVTNSLPSPEQLKGKILLKGKKLGGLLPPGGEG 452          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD1_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus GN=Plcd1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.181e-21
Identity = 64/190 (33.68%), Postives = 101/190 (53.16%), Query Frame = 3
Query:  189 TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL 755
            T++V+ L  FL   Q+E++A    A ++I+     +      +R +  + F  YL   D N        V+ DM  P+SHY + + HN+YL  +QL    S    IRAL KG R +ELD W    ++ + + HG T T+ +     LR+I++YAF AS YPV+++LE+H + +    +A  +   LG IL
Sbjct:  227 TLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKA--QRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPIL 413          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCZ1_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Bos taurus GN=PLCZ1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.155e-21
Identity = 68/209 (32.54%), Postives = 113/209 (54.07%), Query Frame = 3
Query:  147 DAVKSMFDQYSENGTMTVD-HLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPL---SPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            + +  +F+ YSEN  + ++ +L  FL+  Q     +K  A  II     ++ +   Q   ++ E F +Y+  D +  L   +    V+ DMT P++ YFI + HN+YL  +QL         I AL KG R +E+D W  S+ + V V HG T T+ +     +++I +YAF+ASEYPVV++LE+H +P     +A+ +  T G+ L +
Sbjct:   71 EEIIEIFNTYSENRKILLEKNLVEFLMREQYTLDFNKSIASEIIQKYEPIEEVK--QAHQMSFEGFRRYM--DSSECLLFDNKCDHVYQDMTHPLTDYFISSSHNTYLISDQLWGPSDLWGYISALVKGCRCLEIDCWDGSQNEPV-VYHGYTFTSKLLFKTVIQAINKYAFLASEYPVVLSLENHCSPSQQEVMADSLLATFGDALLS 274          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCG1_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1 OS=Bos taurus GN=PLCG1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.155e-21
Identity = 68/199 (34.17%), Postives = 106/199 (53.27%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKE----DKASKEDAQA--IIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT--PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            +++    +FL+E Q E    D+   ++     + D LRE++    F      L+ F  +LF   N   +     V    M  P+SHY+I + HN+YLTG+Q +S+ S     R L+ G R IELD W     D + V+ HG T+T  ++    L +IKE+AFVASEYPV++++EDH +      +A+   + LG+ L T
Sbjct:  249 VSLPEFQQFLLEYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFF------LDEFVTFLFSKENSIWNSQLDEVCPDTMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLT 439          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCZ1_CHICK (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Gallus gallus GN=PLCZ1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.426e-21
Identity = 66/202 (32.67%), Postives = 102/202 (50.50%), Query Frame = 3
Query:  162 MFDQYSENGTMTVD-HLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            +F  YSEN     D  L  FL + Q + + ++  A  +I     +  +   +RR L+ E F +Y+   D          V+ DM  P+  YFI + HN+YL  +QL         I AL KG R +E+D W  S  D V V HG T+T+ +     +  + +YAF AS+YPVV++LE+H +     ++A+ +   LG+ L T
Sbjct:   78 IFCAYSENRKNLADTELTAFLKKEQFKTEGAETTALEVILKYEPIDEVR--KRRQLSFEGFIRYMSSEDCTIFKKEHRTVYQDMNHPLCDYFISSSHNTYLVSDQLIGPSDLNGYISALLKGCRCLEIDCWDGSNNDPV-VYHGHTLTSKITFCSVIHVVDKYAFAASDYPVVLSLENHCSTKQQERIAQYLLNILGDKLLT 276          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCG1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1 OS=Homo sapiens GN=PLCG1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.086e-21
Identity = 67/199 (33.67%), Postives = 106/199 (53.27%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKE----DKASKEDAQA--IIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT--PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            +++    +FL++ Q E    D+   ++     + D LRE++    F      L+ F  +LF   N   +     V    M  P+SHY+I + HN+YLTG+Q +S+ S     R L+ G R IELD W     D + V+ HG T+T  ++    L +IKE+AFVASEYPV++++EDH +      +A+   + LG+ L T
Sbjct:  249 VSLPEFQQFLLDYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFF------LDEFVTFLFSKENSVWNSQLDAVCPDTMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLT 439          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 OS=Mus musculus GN=Plcd1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.086e-21
Identity = 63/190 (33.16%), Postives = 101/190 (53.16%), Query Frame = 3
Query:  189 TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL 755
            T++V+ L  FL   Q+E++A    A ++I+     +      +R +  + F  YL   D N        V+ DM  P+SHY + + HN+YL  +QL    S    IRAL KG R +ELD W    ++ + + HG T T+ +     LR+I++YAF AS YPV+++LE+H + +    +A  +   LG +L
Sbjct:  227 TLSVEKLVTFLQHQQREEEAGPALALSLIERYEPSETAKA--QRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMNQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMAHHLRAILGPML 413          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCG1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1 OS=Mus musculus GN=Plcg1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 9.255e-21
Identity = 68/203 (33.50%), Postives = 107/203 (52.71%), Query Frame = 3
Query:  180 ENGTMTVDHLHRFLIEVQKE----DKASKEDAQA--IIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT--PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            E+  +++    +FL+E Q E    D+   ++     + D LRE++    F      L+    +LF   N   +     V    M  P+SHY+I + HN+YLTG+Q +S+ S     R L+ G R IELD W     D + V+ HG T+T  ++    L +IKE+AFVASEYPV++++EDH +      +A+   + LG+ L T
Sbjct:  245 EHCQVSLSEFQQFLLEYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFF------LDELVTFLFSKENSVWNSQLDAVCPDTMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPVILSIEDHCSIAQQRNMAQHFRKVLGDTLLT 439          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCG1_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus GN=Plcg1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.209e-20
Identity = 67/199 (33.67%), Postives = 105/199 (52.76%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKE----DKASKEDAQA--IIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT--PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFT 761
            +++    +FL+E Q E    D+   ++     + D LRE++    F      L+    +LF   N   +     V    M  P+SHY+I + HN+YLTG+Q +S+ S     R L+ G R IELD W     D + V+ HG T+T  ++    L +IKE+AFVASEYPV++++EDH +      +A+   + LG+ L T
Sbjct:  249 VSLSEFQQFLLEYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFF------LDELVTFLFSKENSVWNSQLDAVCPETMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGP--DGMPVIYHGHTLTTKIKFSDVLHTIKEHAFVASEYPVILSIEDHCSIAQQRNMAQHFRKVLGDTLLT 439          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCZ1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Homo sapiens GN=PLCZ1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.579e-20
Identity = 69/219 (31.51%), Postives = 118/219 (53.88%), Query Frame = 3
Query:  147 DAVKSMFDQYSENGTMTV-DHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPL---SPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            + +  +F+ YSEN  + +  +L +FL + Q   + SK  A  II     ++ +   +   ++LE F +Y+  D    L   +    V+ DMT P++ YFI + HN+YL  +QL         + AL KG R +E+D W  ++ + V V HG T+T+ +     +++I +YAF+ S+YPVV++LE+H +      +A+ +  T GE L    S+ L +FP
Sbjct:   71 EEIIEIFNTYSENRKILLASNLAQFLTQEQYAAEMSKAIAFEIIQKYEPIEEVR--KAHQMSLEGFTRYM--DSRECLLFKNECRKVYQDMTHPLNDYFISSSHNTYLVSDQLLGPSDLWGYVSALVKGCRCLEIDCWDGAQNEPV-VYHGYTLTSKLLFKTVIQAIHKYAFMTSDYPVVLSLENHCSTAQQEVMADNLQATFGESLL---SDMLDDFP 281          
The following BLAST results are available for this feature:
BLAST of DY260262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PLCD1_HUMAN1.428e-2131.221-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD1_RAT3.181e-2133.681-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_BOVIN4.155e-2132.541-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCG1_BOVIN4.155e-2134.171-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_CHICK5.426e-2132.671-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCG1_HUMAN7.086e-2133.671-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD1_MOUSE7.086e-2133.161-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCG1_MOUSE9.255e-2133.501-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCG1_RAT1.209e-2033.671-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_HUMAN1.579e-2031.511-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260262 ID=DY260262; Name=DY260262; organism=Citrus clementina; type=EST; length=995bp
TTTCACAATCCCAAAACATTTTCAACATTCCCATCATTTTCACAGATTAC
CCTTTACTCAATTACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTG
CTTCTGCTTCCGGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACG
CCGTCAAGTCCATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTC
GATCACCTTCACCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTC
CAAAGAAGACGCGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACT
TGAATATCTTTCAACGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTAC
CTCTTCGGTGATATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCA
TGATATGACTGCCCCGGTGTCTCATTACTTTATATATACTGGCCACAATT
CCTATCTGACTGGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATC
ATACGTGCCCTGCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCC
AAATTCGAAGAAAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTG
CTCCAGTGGAACTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTT
GTTGCATCTGAGTATCCAGTTGTTATTACCCTAGAAGACCACCTTACTCC
AGATCTTCCNGCTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAA
TCCTGTTTACCCCTGGCTCAGAATGCCTAAAGGAATTCCCCCCCCCCAGA
ATCACTGAAGAGACGGAACATCCTTTCACCCAACCCGCCAAGGAATACCT
TGAGGCTAAAGAAGAAAAAGGAAAAAGAAAACCATTCCCCGAGGGGTAAA
GGGTTCCGCTGAAGAAAAAGCTTGGGGAAAAGAAGGTCCCCACCCTAAAA
CCCCTTAAAAGTGGCCGTGAAAAGGGAAGATTTTTGAAGGGAGGA
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