DY260262

Overview
NameDY260262
Unique NameDY260262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCH2_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2 OS=Mus musculus GN=Plch2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.579e-20
Identity = 69/204 (33.82%), Postives = 104/204 (50.98%), Query Frame = 3
Query:  207 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL---FGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGE--ILFTPGSECLKEFPPPRI 803
            L RFL   QK +  + E  Q II+       L    +  L ++ F  Y     GDI  P      VH DMT P+SHYFI + HN+YL G+QL S          LQ G R +E+D W     + + V HG T+T+ +     + +I +YAF+ +EYPV++++E+H +     K+A+ +T  LG+   L +  SE     P P++
Sbjct:  337 LQRFLEVEQKMNGVTLESCQNIIEQFEPC--LENKSKGMLGIDGFTNYTRSPAGDIFNPEHNR--VHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI-VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVVQQKKMAQYLTDILGDKLDLSSVSSEDATMLPSPQM 535          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD1_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 OS=Bos taurus GN=PLCD1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.693e-20
Identity = 61/190 (32.11%), Postives = 99/190 (52.11%), Query Frame = 3
Query:  189 TMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL 755
            T++VD L  FL   Q+E++A    A ++I+     +      +R +  + F  YL              V+ DM  P+SHY + + HN+YL  +QL    S    IRAL KG R +ELD W    ++ + + HG T T+ +     +R+I++YAF AS YPV+++LE+H + +    +A  +   LG +L
Sbjct:  227 TLSVDQLVTFLQHQQREEEAGPALALSLIERYEPSETAKA--QRQMTKDGFLMYLLSADGSAFDLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPI-IYHGYTFTSKILFCDVVRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRTLLGPML 413          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Homo sapiens GN=PLCB1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.593e-20
Identity = 65/212 (30.66%), Postives = 114/212 (53.77%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRG-LNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            +TVD +  F+   Q++ + ++        E  Q +I+   + +  N   R+G ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P   AK+AE      G+ L     E L+++P
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIE---KYEPNNSLARKGQISVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALL---MEPLEKYP 445          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCH2_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2 OS=Homo sapiens GN=PLCH2 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 7.835e-20
Identity = 65/202 (32.18%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  207 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGE--ILFTPGSECLKEFPPPRI 803
            L RFL   QK    + E  Q II+            +  L ++ F  Y         +P    VH DMT P+SHYFI + HN+YL G+QL S          LQ G R +E+D W     + + V HG T+T+ +     + +I +YAF+ +EYPV++++E+H +     K+A+ +T  LG+   L +  SE     P P++
Sbjct:  263 LQRFLQVEQKMAGVTLESCQDIIEQFEPCPENK--SKGLLGIDGFTNYTRSPAGDIFNPEHHHVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI-VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVIQQKKMAQYLTDILGDKLDLSSVSSEDATTLPSPQM 461          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB1_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus GN=Plcb1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.835e-20
Identity = 62/211 (29.38%), Postives = 113/211 (53.55%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            +TVD +  F+   Q++ + ++        E  Q +I+      + ++ ++  ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P   AK+AE      G+ L     E L+++P
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEP--NSSLAKKGQMSVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALL---MEPLEKYP 445          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Mus musculus GN=Plcb1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.835e-20
Identity = 62/211 (29.38%), Postives = 113/211 (53.55%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            +TVD +  F+   Q++ + ++        E  Q +I+      + ++ ++  ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P   AK+AE      G+ L     E L+++P
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEP--NSSLAKKGQMSVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALL---MEPLEKYP 445          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB4_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4 OS=Homo sapiens GN=PLCB4 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.336e-19
Identity = 63/218 (28.90%), Postives = 114/218 (52.29%), Query Frame = 3
Query:  153 VKSMFDQYSENGT--MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ------RRGL-NLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSE 773
            ++ +F + + + T  +TVD L  FL E Q++ + + E      D+ R ++ + +++      ++GL + + F +YL  D N P+    + ++ +M  P++HYFI + HN+YLTG Q     S     + L  G R +ELD W    +D   ++ HG  M   +     +++IKE AFV SEYPV+++ E+H +     K+++      G++L     E
Sbjct:  222 IEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLN-EILFPFYDAKRAMQIIEMYEPDEDLKKKGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKQALE 438          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLC_DICDI (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase OS=Dictyostelium discoideum GN=plc PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.745e-19
Identity = 51/157 (32.48%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  324 LNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            ++ E F +++ G+ N    P T  V+ D + P+S+YFI + HN+YL+G+QL    +       L++G + +ELD+W  +  D + + HG T+T+ ++      +IK   F  S YPV+++LE H +      +A  + +  GE+L TP  E  KE P
Sbjct:  296 ISFENFEEFICGEANLAQYPHTSTVYQDTSKPLSYYFINSSHNTYLSGHQLKGLSTSEMYTNTLRQGCKCVELDVWDGNDGDPI-IFHGNTLTSQIKFSHVCETIKARGFETSPYPVILSLEVHCSVPQQIMMANHMKEIFGEMLPTPLPEGTKELP 451          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB4_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4 (Fragment) OS=Bos taurus GN=PLCB4 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.745e-19
Identity = 63/218 (28.90%), Postives = 114/218 (52.29%), Query Frame = 3
Query:  153 VKSMFDQYSENGT--MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ------RRGL-NLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSE 773
            ++ +F + + + T  +TVD L  FL E Q++ + + E      D+ R ++ + +++      ++GL + + F +YL  D N P+    + ++ +M  P++HYFI + HN+YLTG Q     S     + L  G R +ELD W    +D   ++ HG  M   +     +++IKE AFV SEYPV+++ E+H +     K+++      G++L     E
Sbjct:   58 IEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLN-EILFPFYDAKRAMQIIEMYEPDEDLKKQGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKQALE 274          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB1_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Bos taurus GN=PLCB1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.745e-19
Identity = 62/211 (29.38%), Postives = 112/211 (53.08%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            +TVD +  F+   Q++ + ++        E  Q +I+      + ++ ++  ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P   AK+AE      G+ L     E L ++P
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEP--NNSLAKKGQISVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALL---MEPLDKYP 445          
The following BLAST results are available for this feature:
BLAST of DY260262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PLCH2_MOUSE1.579e-2033.821-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD1_BOVIN2.693e-2032.111-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_HUMAN4.593e-2030.661-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCH2_HUMAN7.835e-2032.181-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_RAT7.835e-2029.381-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_MOUSE7.835e-2029.381-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB4_HUMAN1.336e-1928.901-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLC_DICDI1.745e-1932.481-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB4_BOVIN1.745e-1928.901-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_BOVIN1.745e-1929.381-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260262 ID=DY260262; Name=DY260262; organism=Citrus clementina; type=EST; length=995bp
TTTCACAATCCCAAAACATTTTCAACATTCCCATCATTTTCACAGATTAC
CCTTTACTCAATTACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTG
CTTCTGCTTCCGGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACG
CCGTCAAGTCCATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTC
GATCACCTTCACCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTC
CAAAGAAGACGCGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACT
TGAATATCTTTCAACGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTAC
CTCTTCGGTGATATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCA
TGATATGACTGCCCCGGTGTCTCATTACTTTATATATACTGGCCACAATT
CCTATCTGACTGGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATC
ATACGTGCCCTGCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCC
AAATTCGAAGAAAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTG
CTCCAGTGGAACTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTT
GTTGCATCTGAGTATCCAGTTGTTATTACCCTAGAAGACCACCTTACTCC
AGATCTTCCNGCTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAA
TCCTGTTTACCCCTGGCTCAGAATGCCTAAAGGAATTCCCCCCCCCCAGA
ATCACTGAAGAGACGGAACATCCTTTCACCCAACCCGCCAAGGAATACCT
TGAGGCTAAAGAAGAAAAAGGAAAAAGAAAACCATTCCCCGAGGGGTAAA
GGGTTCCGCTGAAGAAAAAGCTTGGGGAAAAGAAGGTCCCCACCCTAAAA
CCCCTTAAAAGTGGCCGTGAAAAGGGAAGATTTTTGAAGGGAGGA
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