DY260262

Overview
NameDY260262
Unique NameDY260262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB4_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus GN=Plcb4 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.888e-19
Identity = 62/218 (28.44%), Postives = 114/218 (52.29%), Query Frame = 3
Query:  153 VKSMFDQYSENGT--MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ------RRGL-NLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSE 773
            ++ +F + + + T  +TVD L  FL E Q++ + + E      D+ R ++ + +++      ++GL + + F +YL  D N P+    + ++ +M  P++HYFI + HN+YLTG Q     S     + L  G R +ELD W    +D   ++ HG  M   +     +++IKE AFV SEYPV+++ E+H +     ++++      G++L     E
Sbjct:  222 IEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLN-EILFPFYDAKRAMQIIEMYEPDEELKKKGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYQMSKYCEDLFGDLLLKQALE 438          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLC1_YEAST (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase 1 OS=Saccharomyces cerevisiae GN=PLC1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.299e-18
Identity = 71/233 (30.47%), Postives = 115/233 (49.36%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSECLKEFPPPRITEETEHPFTQPAKEYLEAKEEKGKRKPFP 890
            ++ ++  +FLI  Q E +  ++ A +     RE   L + Q      + F K+L     P L    V     + P++HYFI + HN+YL G Q+    S    I+ LQ+G R +E+DIW     +N  V+  G +T+ + L   +R IK+YAF+ S YP++I+LE +   D     + ++ + L E L+  G+   K  P PR   E +H     +K+  EA       +PFP
Sbjct:  322 LSFENFFQFLITEQHE-QVDRQTAWSYFIKYREPTQLTMGQ------DGFTKFL--KEQPYL--VEVKEELYSKPLNHYFIASSHNTYLLGKQIAETPSVEGYIQVLQQGCRCVEIDIWDG---ENGPVVCHGFLTSAIPLKTVIRVIKKYAFITSPYPLIISLEINCNKDNQKLASLIMREVLAEQLYFVGTRTDK-LPSPR---ELKHKILLKSKKTSEATRGLSVNEPFP 536          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLC1_SCHPO (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase 1 OS=Schizosaccharomyces pombe GN=plc1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.299e-18
Identity = 65/206 (31.55%), Postives = 103/206 (50.00%), Query Frame = 3
Query:  153 VKSMFDQY-SENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRG--LNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW--PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL 755
            +  +F +Y S +  M+++    FL   QK        A+   DS+R L +++        + L  F  +L    N P+ P   V  DM+ P++ Y I + HN+YL G Q   + S    IR+LQ+G + IE+D W  PN       V HG T T+ ++    + +I++YAFV S YP+ I+LE H  PD   ++   + Q  G+ L
Sbjct:  368 IVDIFKEYTSGSDKMSLEQFRHFLSTSQK--------ARLDSDSIRTL-YVSFCSNDDSKMGLIEFTSFLLSPHNSPVVP---VIQDMSRPLNEYLISSSHNTYLLGKQFGGESSIEGYIRSLQRGCKCIEIDCWDGPNGPV----VCHGHTFTSMIKFNDVIDAIRKYAFVVSPYPLFISLEIHCCPDQQRQMVSYMKQAFGDTL 557          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB3_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus GN=Plcb3 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 9.578e-18
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWP-NSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEIL 755
            +T++ L  F+ + Q++ + ++          A+ +I+     K     +R  +++E F +YL G+ N  L    + +  DMT P+S YFI + HN+YLT  QL    S     +AL  G R +ELD+W     ++   + HG TMT  V L   L +I E AF  S YPV+++ E+H+ +    AK+AE      GE L
Sbjct:  239 LTLEQLMDFINQKQRDPRLNEVLYPPLRSSQARLLIEKYEPNKQF--LERDQMSMEGFSRYLGGEENGILPLEALDLSMDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGEAL 435          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCD4_XENLA (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Xenopus laevis GN=plcd4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.251e-17
Identity = 64/214 (29.91%), Postives = 109/214 (50.93%), Query Frame = 3
Query:  147 DAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAII------DSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHH----DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL 755
            D V  +F  +S++G  +T+     FL + Q E++ ++E A  +I      D+ ++L          ++++ F  YL    +P  S   V H     DM  P+ HYFI + HN+YL  +Q+    S    IRAL++G R +E+D W     + + V HG T T+ +     + +I +YAF  S+YPV+++LE+H   +    +A+ +   LG  L
Sbjct:  206 DEVLKIFQDFSKDGKKLTLLEFVDFLQQGQLEEENTEEIAMDLIARYEPSDTAKKL--------HAMSIDGFLVYL---CSPEGSIFNVAHEQLYQDMMQPLCHYFISSSHNTYLMEDQIRGQSSIEGYIRALKRGCRCVEVDTWDGPNGEPI-VYHGRTFTSKILFKDVISAIDKYAFRVSDYPVILSLENHCGVEQQDAMAQHLKSILGNKL 407          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCH1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-1 OS=Homo sapiens GN=PLCH1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.634e-17
Identity = 63/209 (30.14%), Postives = 107/209 (51.20%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG---DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEIL---FTPGSECLKEFPPPR 800
            +TV+ L +FL   QK +  + +    II      +   +  +  L +E F  ++     DI  PL     V+ DM  P+ +Y+I + HN+YLTG+QL S        R LQ+G R +E+D W     + V V HG T+T+ +     + +I ++AFV +E+PV++++E+H +     K+A+ +    G+ L        EC K+ P P+
Sbjct:  231 LTVEELAQFLKVEQKMNNVTTDYCLDIIKKFEVSEENKV--KNVLGIEGFTNFMRSPACDIFNPLHHE--VYQDMDQPLCNYYIASSHNTYLTGDQLLSQSKVDMYARVLQEGCRCVEVDCWDGPDGEPV-VHHGYTLTSKILFRDVVETINKHAFVKNEFPVILSIENHCSIQQQRKIAQYLKGIFGDKLDLSSVDTGEC-KQLPSPQ 433          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB3_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3 OS=Mus musculus GN=Plcb3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 63/199 (31.66%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWP-NSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEIL 755
            +T++ L  F+ + Q++ + ++          A+ +I+     K     +R  +++E F +YL G+ N  L    + +  DMT P+S YFI + HN+YLT  QL    S     +AL  G R +ELD+W     ++   + HG TMT  V L   L +I E AF  S YPV+++ E+H+ +    AK+AE      G+ L
Sbjct:  241 LTLEQLMDFINQKQRDPRLNEVLYPPLRSSQARLLIEKYETNKQF--LERDQMSMEGFSRYLGGEENGILPLEALDLSMDMTQPLSAYFINSSHNTYLTAGQLAGPSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAEAAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDAL 437          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCB3_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3 OS=Homo sapiens GN=PLCB3 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.640e-17
Identity = 65/211 (30.81%), Postives = 107/211 (50.71%), Query Frame = 3
Query:  192 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWP-NSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLPAKVAEMVTQTLGEILFTPGSECLKEFP 791
            +T++ L  F+ + Q++ + ++          A+ +I+      +    +R  +++E F +YL G+ N  L    + +  DMT P+S YFI + HN+YLT  QL    S     +AL  G R +ELD+W     ++   + HG TMT  V L   L +I E AF  S YPV+++ E+H+ +    AK+AE      G+ L     E L ++P
Sbjct:  241 LTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEP--NQQFLERDQMSMEGFSRYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLI---EPLDKYP 446          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCZ1_PIG (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Sus scrofa GN=PLCZ PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.208e-17
Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 3
Query:  393 VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPG-SECLKEFPPP 797
            V+ DMT P+S YFI + HN+YL  +Q+    +    + AL KG R +E+D W  S+ + V V HG T+T+ +     +++I +YAF+ S+YPVV++LE+H +      +A+ +    G+ L +    +C    P P
Sbjct:  153 VYQDMTHPLSDYFISSSHNTYLISDQIMGPSNLWGYVSALVKGCRCLEIDCWDGSQNEPV-VYHGYTLTSKLLFKTVIQAIHKYAFITSDYPVVLSLENHCSLSQQEVMADNLQSVFGDALLSDVLDDCPDRLPSP 287          
BLAST of DY260262 vs. ExPASy Swiss-Prot
Match: PLCL2_MOUSE (Inactive phospholipase C-like protein 2 OS=Mus musculus GN=Plcl2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  312 QRRG-LNLEAFFKYLFGDINPPLSPT-PVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLH-GGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLPAKVAEMVTQTLGEILFTPGSECLKEFPP 794
            Q +G L+++ F  YL         P    V  DM  P+SHYFI + HN+YL  +Q          IRAL+ G R +ELD+W     DN  V++ G TMT+ +     +  I +YAF ASEYP+++ LE+H +      + + + + LG+ L+T      + + P
Sbjct:  396 QEKGWLSIDGFTNYLMSPDCYIFDPEHKKVCQDMKQPLSHYFINSSHNTYLIEDQFRGPSDITGYIRALKMGCRSVELDVWDG--PDNEPVIYTGHTMTSQIVFRSVIDIINKYAFFASEYPLILCLENHCSIKQQKVMVQHMKKILGDKLYTTSPNMEESYLP 557          
The following BLAST results are available for this feature:
BLAST of DY260262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PLCB4_RAT3.888e-1928.441-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLC1_YEAST4.299e-1830.471-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLC1_SCHPO4.299e-1831.551-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB3_RAT9.578e-1832.161-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_XENLA1.251e-1729.911-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCH1_HUMAN1.634e-1730.141-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB3_MOUSE2.134e-1731.661-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB3_HUMAN3.640e-1730.811-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_PIG6.208e-1734.561-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCL2_MOUSE1.059e-1633.54Inactive phospholipase C-like protein 2 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260262 ID=DY260262; Name=DY260262; organism=Citrus clementina; type=EST; length=995bp
TTTCACAATCCCAAAACATTTTCAACATTCCCATCATTTTCACAGATTAC
CCTTTACTCAATTACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTG
CTTCTGCTTCCGGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACG
CCGTCAAGTCCATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTC
GATCACCTTCACCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTC
CAAAGAAGACGCGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACT
TGAATATCTTTCAACGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTAC
CTCTTCGGTGATATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCA
TGATATGACTGCCCCGGTGTCTCATTACTTTATATATACTGGCCACAATT
CCTATCTGACTGGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATC
ATACGTGCCCTGCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCC
AAATTCGAAGAAAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTG
CTCCAGTGGAACTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTT
GTTGCATCTGAGTATCCAGTTGTTATTACCCTAGAAGACCACCTTACTCC
AGATCTTCCNGCTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAA
TCCTGTTTACCCCTGGCTCAGAATGCCTAAAGGAATTCCCCCCCCCCAGA
ATCACTGAAGAGACGGAACATCCTTTCACCCAACCCGCCAAGGAATACCT
TGAGGCTAAAGAAGAAAAAGGAAAAAGAAAACCATTCCCCGAGGGGTAAA
GGGTTCCGCTGAAGAAAAAGCTTGGGGAAAAGAAGGTCCCCACCCTAAAA
CCCCTTAAAAGTGGCCGTGAAAAGGGAAGATTTTTGAAGGGAGGA
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