DY260263

Overview
NameDY260263
Unique NameDY260263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length988
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAAS (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MSSA476) GN=odhB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAAR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=odhB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IAVI   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAVI---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=odhB PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAAM (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=odhB PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAAC (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain COL) GN=odhB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAA8 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain NCTC 8325) GN=odhB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAA3 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain USA300) GN=odhB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.086e-13
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_BARQU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bartonella quintana GN=sucB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.418e-13
Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEGV 603
            VP +GES+T+ T+ K+ K+ G+ V +DEP+ ++ETDKVT++V SP  G + ++IAKEG+ VE  A +  +     G+
Sbjct:    7 VPTLGESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAKEGDIVEVNAVLGFVESGAAGI 83
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_STAHJ (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus haemolyticus (strain JCSC1435) GN=odhB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.125e-13
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1 
Query:  373 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKSGEG 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S + GV+Q+ +A EG+TVE G  IA +   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEEGVLQEQLASEGDTVEVGQVIATV---GEG 78
[Close]
BLAST of DY260263 vs. ExPASy Swiss-Prot
Match: ODO2_SCHPO (Probable dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC776.15c PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.568e-12
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1 
Query:  376 PFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIQKLIAKEGETVEPGAKIAVISKS 591
            P   ESIT+GTLA++LKQPG+ V  DE IA +ETDK+   V +P AGV+++ + KEG+T+     IAVI  S
Sbjct:   48 PPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEGDTITIDQDIAVIDTS 119
The following BLAST results are available for this feature:
BLAST of DY260263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ODO2_STAAS1.086e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAR1.086e-1353.95Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAN1.086e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAM1.086e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAC1.086e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA81.086e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA31.086e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BARQU1.418e-1342.86Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAHJ4.125e-1351.32Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_SCHPO1.568e-1251.39Probable dihydrolipoyllysine-residue succinyltrans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YO22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260263 ID=DY260263; Name=DY260263; organism=Citrus clementina; type=EST; length=988bp
CTCCGAGTCCTGTATAATTTGATCCCAGATTCCTTTTTATTCCTTCCCAT
CTAAAAAGAAAAATAAATAAAGCACATAGTTTTTTCGGAAATGATTTGGG
GAATTGTTCCCCGCAAAATCACTTCGGCTCAAGTGATTGGACCATCAGTG
TCAAAGATTGGGCCCAGATGTCACGCGACTGCGCAAAAGGAGGCTATACT
CACTTGCAGAGGTTTTCAGCGTGTTCAGCGTTCTAGCTATCACATTTTGT
CAGGGAATTATGTTTGTTCGACGCCAAGAAGCGAAGTAATTGAGCTGATA
CAGAAAGGATCTTTTATTGGATCGAGAAGTAGATTGTTTTCTTCAGATAG
TGGAGACCTGGTTGATGCTGTTGTTCCCTTCATGGGTGAATCCATTACTG
ATGGAACATTGGCGAAGTTTTTGAAGCAACCTGGAGATAGAGTTGAAATT
GATGAGCCCATTGCTCAAATTGAAACCGATAAGGTGACAATTGATGTGGC
TAGTCCTCAAGCCGGTGTTATCCAAAAGCTTATAGCCAAGGAAGGTGAAA
CTGTGGAACCAGGTGCAAAGATTGCTGTTATTTCAAAATCAGGTGAAGGT
GTTGCTCAAGCTGCTCCAGCAGAGAAAGCTGCTGCTCAGCCCCCCCCTGC
TGAAGAAAAGCCAAGTGTTGAGAAGCAAACTCCTGAGTCGGAAGCCGCCC
CTGCCGTAAAAGATAAAACCCCCCTCTGAACCACCTCCTACAGCCCAAAA
ACCTACTTCACCTTCAAAACCCTGGCTTCAAACCCCCGCCTCCCCCCCAG
GACCGAGAGAGACGGGTCCCTATGACCAGACTTAAGAAAAGGGTCCCCAC
CCCCCTGAAAAATTCTCAAAATACCTTTGCCCTGCCTACCCCCTTTAATG
AGGTTGATATGACTAACCTTGATGAAACCCCCCCCTCCAATAAAAAGGAT
GCCTTTCCTTGGAAAAACCGGGGGGGGAAATTGGGACC
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