DY260274

Overview
NameDY260274
Unique NameDY260274
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_POLNA (Glucose-6-phosphate isomerase OS=Polaromonas naphthalenivorans (strain CJ2) GN=pgi PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.354e-24
Identity = 85/268 (31.72%), Postives = 129/268 (48.13%), Query Frame = 2
Query:   62 CDTEP-WKDLKNHVQEI-KKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALR-------APRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFAVAKHMVAVSTNLTLVKKFGIDPNNAF 835
            CD  P W  L  H     +   +R+  + D  R ++   +   +  D S+      +   L  LA    L  + + M+ GE INSTE R+V+H  LR        P  AAIN    +   EV   L+ +  ++E +R+ +        + D+V +GIGGS LGP     AL     A     G++L F++N+D  ++A  +  + PE TL +V SKTFTT ETM NA + + W   A G   +A+H  A++TN+    +FGI     F
Sbjct:    6 CDQTPAWAALNTHFNASGRHFDVREAFARDARRFEAFSQDAPHVFADLSKNLIDADSQALLLALARQCGLEQQRDAMFAGELINSTEQRAVMHFLLRNPPSAQYTPAQAAINKIA-DAQAEVEVTLNAMLAYAEQVRADA-------AITDIVNIGIGGSDLGPQMAVLALNEFATA-----GKRLHFVSNIDGDELAGVLGLVKPENTLFLVASKTFTTTETMTNARSAKAWFE-ARGGQDIARHFAALTTNVAAANEFGITTTFGF 259          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_TREDE (Glucose-6-phosphate isomerase OS=Treponema denticola GN=pgi PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.399e-23
Identity = 72/215 (33.49%), Postives = 110/215 (51.16%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGIL-LDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T+  K  K   + +K   + D  +   R ++  V+  G L  +Y+ +    + +  L  LA+  +L  K   + NG+ IN+ ENR VLH   R      +   G N+       L KIKEFSE + SG    + GKV  DVV +GIGGS LGP  ++ AL+         +  +  F++NVDP D A+ +  +N  +TL ++VSK+ TT ET+ N
Sbjct:   13 TQLQKAHKEQAENLKLADIFDTENSVKRVKNYSVKMGGNLKYNYAAKPVNDEILKALQSLADEQKLIEKYELLLNGDFINTGENRMVLHQLTRGQLKNDVVYKGVNMRSFYLNELKKIKEFSEAVHSGKIKTSQGKVFTDVVQIGIGGSDLGPRAMYIALKN-----RAKKKMRAHFISNVDPDDAAEVLNSINLASTLFILVSKSGTTQETLAN 222          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_ERYLH (Glucose-6-phosphate isomerase OS=Erythrobacter litoralis (strain HTCC2594) GN=pgi PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.086e-21
Identity = 70/224 (31.25%), Postives = 110/224 (49.11%), Query Frame = 2
Query:  170 EFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFAVAKHMVAVSTNLTLVKKFGIDPNNAFSF 841
            E  GIL D+S+ + T + +D    LA+A        ++ +G KIN TE R+  H A R        +  +  V E   ++ ++K   + I  G    A G+V K ++ VGIGGS LGP     AL  DL  ++      +  ++N+D + + ++    +P TTL+ + SKTFTT ETM NA +   W+ T  G       +VA++ N     +FG+D      F
Sbjct:   49 EAGGILFDWSKTHLTDELLDGFEALADAMDFAGAREKLLSGAKINVTEGRAAEHTAQRG-------TGAEASVEEAVALMGRMKALVDAIHGG----AMGEV-KHLIHVGIGGSALGPKLALDALTRDLALVD------VHVVSNIDGVALEQAFAACDPATTLIAIASKTFTTIETMTNATSALHWLKTN-GVDDPHGRVVALTANPEAAVEFGVDETRVLPF 253          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_ZYMMO (Glucose-6-phosphate isomerase OS=Zymomonas mobilis GN=pgi PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.280e-19
Identity = 73/244 (29.92%), Postives = 116/244 (47.54%), Query Frame = 2
Query:  110 KKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFAVAKHMVAVSTNLTLVKKFGIDPNNAFSF 841
            +KT  +    D++R   ++VE   +  D+S+ +   + +    +L EA   + +   ++ GEKIN TE+R+V H+A R     A  +  K     +  +++ I             GA G+V K ++ +GIGGS LGP  +  AL  +    + A       ++NVD   + +     NP  TL+ V SKTFTTAETMLNA +  EW+    G       M+A++ N     + GID      F
Sbjct:   22 EKTLKQLFEEDSNRLSGLVVETAKLRFDFSKNHLDSQKLTAFKKLLEACDFDARRKALFAGEKINITEDRAVEHMAERGQGAPASVARAKEYHARMRTLIEAID-----------AGAFGEV-KHLLHIGIGGSALGPKLLIDALTRESGRYDVA------VVSNVDGQALEEVFKKFNPHKTLIAVASKTFTTAETMLNAESAMEWMKKH-GVEDPQGRMIALTANPAKASEMGIDDTRILPF 246          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_BORAP (Glucose-6-phosphate isomerase OS=Borrelia afzelii (strain PKo) GN=pgi PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.280e-19
Identity = 58/182 (31.87%), Postives = 99/182 (54.40%), Query Frame = 2
Query:  167 VEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKV-LDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +E D +  +Y+ +      +     L++ A L  K  ++ NGE++N +ENR VLH   R      +  D K  + E ++  L+KI  F++ I SG+   A GK  K+VV +GIGGS LGP  ++++++   +    A      F++N+DP + A+ +  +N + TL ++VSK+  T ET  N
Sbjct:   40 IEGDSVHYNYASKQINENHLKIFQNLSDEANLIEKYKEILNGERVNISENRKVLHHLTRGQIGKDVIEDNKENMREFFQSELEKIYNFAKQIHSGNIKSANGKKFKNVVQIGIGGSSLGPKALYSSIKNYAKKHNLAL-MNGYFISNIDPDESAEVLNSINIDETLFIIVSKSGNTLETKAN 220          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_STRMK (Glucose-6-phosphate isomerase OS=Stenotrophomonas maltophilia (strain K279a) GN=pgi PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.079e-19
Identity = 68/228 (29.82%), Postives = 118/228 (51.75%), Query Frame = 2
Query:   86 LKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPR-DAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFAVA 763
            L +H Q +K   +  L++ +  R Q + +    + ++++RQ      +  L  LA    +   I +++ GE++N TE R+ LH ALR    DA + ++      E+ + +  +      +R+    G T     DVV+VGIGGS LGP  V  AL+     +  AR R + F++NVD   + +++  L+P  T  +++SKTF T ET+LN   L +W+  +   +AV+
Sbjct:   10 LHSHAQRLKGASIPGLLAAEPGRVQDLALRVGPLYVNFARQKYDAAALQALLALAADRDVGGAITRLFRGEQVNLTEGRAALHTALRGDVVDAPVAAEAYATAREIRQRMGVL------VRALEDSGVT-----DVVSVGIGGSDLGPRLVADALRP----VSGARLR-VHFVSNVDGAAMQRTLATLDPAKTAGILISKTFGTQETLLNGQILHDWLGGSDRLYAVS 221          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_BORGA (Glucose-6-phosphate isomerase OS=Borrelia garinii GN=pgi PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.079e-19
Identity = 64/216 (29.63%), Postives = 110/216 (50.93%), Query Frame = 2
Query:   65 DTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKV-LDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            + E +K L+    E+ KT L        +   + +E D +  +Y+ +      +     L++ A L  K  ++ NGEKIN +ENR VLH   R      +  D K  + E ++  L+KI  F++ + SG+     GK  K+VV +GIGGS LGP  ++++++   +    A      F++N+DP +  + +  +N + TL ++VSK+  T ET  N
Sbjct:    9 ELENFKILEGIAPEVLKTALT---GKRIKEYDITIEGDSVHYNYASKQINENHLKIFQNLSDEANLIEKYKEVLNGEKINISENRKVLHHLTRGQIGKDVIEDNKENMREFFQSELEKIYNFAKQVHSGNIKSVNGKKFKNVVQIGIGGSSLGPKALYSSIKNYAKKHNLAL-MNGYFISNIDPDESEEVLNSINLDETLFIIVSKSGNTLETTAN 220          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_BORBZ (Glucose-6-phosphate isomerase OS=Borrelia burgdorferi (strain ZS7) GN=pgi PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.663e-19
Identity = 64/216 (29.63%), Postives = 112/216 (51.85%), Query Frame = 2
Query:   65 DTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKV-LDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            + E +K L+    E+ KT L        +   + +E D +  +Y+ +      +     L++ A L  K  ++ +GEKIN +ENR VLH   R      +  D K  + E ++  L+KI  F++ I SG+   + GK  K+VV +GIGGS LGP  ++++++   +    A      F++N+DP +  + ++ +N + TL ++VSK+  T ET  N
Sbjct:    9 ELENFKILEGIAPEVLKTALT---GKRIKEYDITIEGDSVHYNYASKQINETHLKIFQNLSDEANLIEKYKEVLDGEKINISENRKVLHHLTRGQIGKDVIEDNKENMREFFQSELEKIYNFAKQIHSGNIKSSNGKKFKNVVQIGIGGSSLGPKALYSSIKNYAKKHNLAL-MNGYFISNIDPDESEEVLSSINVDETLFIIVSKSGNTLETKAN 220          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_BORBU (Glucose-6-phosphate isomerase OS=Borrelia burgdorferi GN=pgi PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.663e-19
Identity = 64/216 (29.63%), Postives = 112/216 (51.85%), Query Frame = 2
Query:   65 DTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKV-LDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            + E +K L+    E+ KT L        +   + +E D +  +Y+ +      +     L++ A L  K  ++ +GEKIN +ENR VLH   R      +  D K  + E ++  L+KI  F++ I SG+   + GK  K+VV +GIGGS LGP  ++++++   +    A      F++N+DP +  + ++ +N + TL ++VSK+  T ET  N
Sbjct:   11 ELENFKILEGIAPEVLKTALT---GKRIKEYDITIEGDSVHYNYASKQINETHLKIFQNLSDEANLIEKYKEVLDGEKINISENRKVLHHLTRGQIGKDVIEDNKENMREFFQSELEKIYNFAKQIHSGNIKSSNGKKFKNVVQIGIGGSSLGPKALYSSIKNYAKKHNLAL-MNGYFISNIDPDESEEVLSSINVDETLFIIVSKSGNTLETKAN 222          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_XYLFM (Glucose-6-phosphate isomerase OS=Xylella fastidiosa (strain M12) GN=pgi PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.131e-18
Identity = 64/228 (28.07%), Postives = 117/228 (51.32%), Query Frame = 2
Query:   86 LKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGR-QLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFAVA 763
            L+ H   ++   + DL++ +  R +    +   +  +++RQ      ++ L+ LA    +     +M+ GE++N TE R+VLH ALR       +  G +V    +    K++E    + +G         + D+V+VGIGGS LGP  V  AL+        ++GR ++ F++NVD   + +++  L+P  T  +++SKTF T ET+LN   L +W+  +   +AV+
Sbjct:    8 LQLHANRLRGVTIPDLLAAELKRPEQYARQVGPLYFNFARQKYDCVALEALFALARNHNVTGAFQRMFCGEQVNVTEGRAVLHTALRG------DLSGTSVAVAAYTAAAKVRERMYALIAG----LDASEVTDIVSVGIGGSDLGPRLVVDALRP------ISQGRFRVHFVSNVDGAAMRRTLDMLDPSRTAGILISKTFGTQETLLNGRILYDWLGGSERLYAVS 219          
The following BLAST results are available for this feature:
BLAST of DY260274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 443
Match NameE-valueIdentityDescription
G6PI_POLNA2.354e-2431.72Glucose-6-phosphate isomerase OS=Polaromonas napht... [more]
G6PI_TREDE3.399e-2333.49Glucose-6-phosphate isomerase OS=Treponema dentico... [more]
G6PI_ERYLH7.086e-2131.25Glucose-6-phosphate isomerase OS=Erythrobacter lit... [more]
G6PI_ZYMMO2.280e-1929.92Glucose-6-phosphate isomerase OS=Zymomonas mobilis... [more]
G6PI_BORAP2.280e-1931.87Glucose-6-phosphate isomerase OS=Borrelia afzelii ... [more]
G6PI_STRMK5.079e-1929.82Glucose-6-phosphate isomerase OS=Stenotrophomonas ... [more]
G6PI_BORGA5.079e-1929.63Glucose-6-phosphate isomerase OS=Borrelia garinii ... [more]
G6PI_BORBZ8.663e-1929.63Glucose-6-phosphate isomerase OS=Borrelia burgdorf... [more]
G6PI_BORBU8.663e-1929.63Glucose-6-phosphate isomerase OS=Borrelia burgdorf... [more]
G6PI_XYLFM1.131e-1828.07Glucose-6-phosphate isomerase OS=Xylella fastidios... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260274 ID=DY260274; Name=DY260274; organism=Citrus clementina; type=EST; length=995bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAATGCTCCAACCTTGAGAGAATGGATATCAACTGCTCTTGGGCC
CTTCGCAGTTGCAAAGCACATGGTGGCTGTCAGTACTAATCTTACGCTGG
TAAAAAAGTTTGGCATTGATCCTAATAATGCATTTTCCTTCCGGGGACTG
GGTTGGTGGTCCGGTATAATTGTTTGCCGTGCCGGCCGGGGTTTTTCCCC
CCGTCCCCTTCATAAGGGTTTCCCCATTTGTTGAAAAAATTCCTAAAGGG
GGGCCTGGAAACCTTTCACCCACCATTTTCCTTTCCCGCCCCCTT
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