DY260274

Overview
NameDY260274
Unique NameDY260274
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length995
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_DESHY (Glucose-6-phosphate isomerase OS=Desulfitobacterium hafniense (strain Y51) GN=pgi PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.604e-12
Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDP--IDVAKSITGLNPETTLVVVVSKTFTTAET 700
            G+LLD SR N + + +  + +    A   +++  +  G   N  E R V H  LR P  A      + +V ++ + L +I +F+E I SG   G  G   ++++ VG+GGS LGP FV  AL +  + ++        F+ N DP  ID   S  G     TL +++SK+  T ET
Sbjct:   21 GLLLDISRMNFSAEFLRSMAEPMREAY--HQLQLLEKGALANPDEGRMVGHYWLRNPDLAPT----EEIVQDIKETLKEILDFAEQIHSGRLQGEKGNPFRNILLVGVGGSILGPRFVADALASSRDKMKAF------FIDNGDPDGIDRVLSRIGEELPATLCLIISKSGGTIET 184          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_PROMT (Glucose-6-phosphate isomerase OS=Prochlorococcus marinus (strain NATL2A) GN=pgi PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.853e-12
Identity = 52/178 (29.21%), Postives = 83/178 (46.63%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNP--ETTLVVVVSKTFTTAETML 706
            G  LD SR +  +   +   ++   A   + +  + NG   N  E R V H  LR P+ A        +   + K +  I +F  +I +G    + G+   DV  +GIGGS LGPL +  + + +      + G  L FL NVDP  ++  +  + P   +TL VVVSK+  T E ++
Sbjct:   21 GFWLDISRMDVAINDFEDFNEIYSKAF--DALESLENGSIANIDEGRQVGHYWLRNPKVAP----SPEISDSITKEIQDISKFGSSILNGEITNSDGEKYTDVFWIGIGGSGLGPLLIKESFKRE------SIGLDLHFLDNVDPEGISHKLNSILPNLNSTLFVVVSKSGGTPEPLI 186          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_PROMA (Glucose-6-phosphate isomerase OS=Prochlorococcus marinus GN=pgi PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.853e-12
Identity = 65/223 (29.15%), Postives = 97/223 (43.50%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPE--TTLVVVVSKTFTTAETMLNAPTLR--------EWISTALGPFAVAKHMVAVSTNLTLVKKFGI 817
            G  LD SR   + + +  L    + A  + K   +  G   N  E+R V H  LR    A       ++  E+    + IK F E I +G    A GK   DV+ +GIGGS LGPL +  +LQ +       +G    FL NVDP  + K++     +  TTL VVVSK+  T E  +     R        +W S A+        +  ++ N   +K+F +
Sbjct:   29 GFWLDISRMKFSSEDIGSLQDNFKEACKSMKA--LEKGSIANIDESRQVGHYWLRNASLAPSKQTSNSIRNEI----NDIKTFGENILNGKITTAQGKPFTDVLWIGIGGSGLGPLLIVNSLQDN------NKGLNFSFLDNVDPNGINKTLNSFRDKLSTTLFVVVSKSGGTPEPQIAMDQTRFFLDKNGLDWSSRAVAITMEGSSLDQIAENEKWLKRFDL 239          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_CYAP4 (Glucose-6-phosphate isomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgi PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.340e-11
Identity = 59/205 (28.78%), Postives = 98/205 (47.80%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNP--ETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFAVAKHMVAVST 787
            GI LD SR       ++ L    + A+    +  +  G   N  E+R V H  LRAP  A      + +  E+ + L++I+ F+  +  G      G +  D+++VGIGGS LGP FV  +L  +   ++      + FL N DP  + + +  + P   TTLV+++SK+  T ET      + +    A   F  A+H VA+++
Sbjct:   21 GIYLDVSRMRFDSAFVETL--APQFAKAFADMAALEAGAIANPDEHRQVGHYWLRAPEIAPT----EELKTEIVETLEQIETFAAKVHHGQIHPTRGGLFTDIISVGIGGSALGPQFVSQSLAPERPPLD------IHFLDNTDPDGIDRVLNRVEPRLSTTLVIIISKSGGTPETRNGMLEVEKRFKDAGLNF--AEHAVAITS 211          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_CHLFF (Glucose-6-phosphate isomerase OS=Chlamydophila felis (strain Fe/C-56) GN=pgi PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.750e-11
Identity = 53/194 (27.32%), Postives = 91/194 (46.91%), Query Frame = 2
Query:  146 DRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKIN-----STENRSVLHVALRA-PRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +R +   +  +G    Y+ +      +  L  LA    L   +  M NGE +N      +E+R  LH A RA  R  ++  + +++       + ++++F    R              +V +GIGGS LGP  +H AL+       C   +++ F++NVDP + A+ +  ++   TLVV VSK+ TT ET +N
Sbjct:   34 ERIERFSLFVEGFTFSYAMERVDDGILSALTGLASERGLLASMKAMQNGEVVNYIDNFPSESRPALHTATRAWVRGISLTGNAEDISLRSKIEVQRLRDFLNKYRDA---------FTTIVQIGIGGSELGPKALHCALKGC-----CPSDKKVYFVSNVDPDNAAEVLQEIDCSKTLVVTVSKSGTTLETAVN 213          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_ANAVT (Glucose-6-phosphate isomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgi PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.750e-11
Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 2
Query:  179 GILLDYSRQN-------ATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGL--NPETTLVVVVSKTFTTAE 697
            G+ LD SR         + L   DK +  A+ A+L         G   N  ENR V H  LR P D A   +   +  E+ + L++I+ F+E I++G+          D++++GIGGS LGP FV  AL  +   +      ++ F+ N DP  + K +T L  N  +TLV+V+SK+  T E
Sbjct:   21 GLYLDVSRMRFDDAFVKSLLPKFDKAF--ADMAELEK-------GAIANPDENRMVGHYWLRNP-DLAPTPE---IAQEIVQTLEQIEAFAEKIQTGAIHPPKANRFTDIISIGIGGSALGPQFVAEALAPEFPPL------KIHFIDNTDPAGIDKILTHLRNNLASTLVLVISKSGGTPE 183          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_DESHD (Glucose-6-phosphate isomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=pgi PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.984e-11
Identity = 54/175 (30.86%), Postives = 86/175 (49.14%), Query Frame = 2
Query:  182 ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDP--IDVAKSITGLNPETTLVVVVSKTFTTAET 700
            +LLD SR N + + + +L +    A   +++  +  G   N  E R V H  LR P  A      + +  ++ + L +I +F+E I SG   G  G   ++++ VG+GGS LGP FV  AL +  + ++        F+ N DP  ID   S  G     TL +++SK+  T ET
Sbjct:   22 LLLDISRMNFSAEFLTELAEPMRDAY--HQLQLLEKGALANPDEGRMVGHYWLRNPDLAPT----EEIAQDIKETLKEILDFAEQIHSGRLQGEKGNPFRNILLVGVGGSILGPRFVADALASSRDKMKAF------FIDNGDPDGIDRVLSRIGEELPATLCLIISKSGGTIET 184          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_SYNSC (Glucose-6-phosphate isomerase OS=Synechococcus sp. (strain CC9605) GN=pgi PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 5.090e-11
Identity = 59/195 (30.26%), Postives = 86/195 (44.10%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNP--ETTLVVVVSKTFTTAETMLNAPTLREWISTALGPFA 757
            G+ LD SR +     + +L    + A     + ++  G   N  E R V H  LR P  A  +   +++  E+    D I  F   + +G+     G+   DV+ +GIGGS LGP  +  ALQ   E      G    F  NVDP  ++  + GL    + TLVV VSK+  T E  L     R  +  A G +A
Sbjct:   29 GVWLDISRMHVNASDLQQLQPRMDKAFA--AMQELEAGAIANPDEQRQVGHYWLRTPELAPSSELQQHISREI----DLIAAFGRDVVNGTIKAPNGEAFTDVLWIGIGGSGLGPALMIKALQNPGE------GLPFHFFDNVDPNGMSNVLAGLEGRLDRTLVVTVSKSGGTPEPHLGMEQARHRLEAAGGQWA 211          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_GEOMG (Glucose-6-phosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.090e-11
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  179 GILLDYSRQNAT---LKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPET--TLVVVVSKTFTTAET 700
            G++LD SR N     L +M+   Q A A     ++ ++  G   N  E R V H  LR+P      S    +  E+ + + +I+EF+  +  GS     G+  + ++ VGIGGS LGP FV  AL       +        F  N DP  + + +  + P+   TL VV+SK+  T ET
Sbjct:   21 GLMLDISRMNFADGFLASMESATQKAFA-----EMGELEGGAIANPDEGRMVGHYWLRSPD----LSPTDEIAAEIGETVQRIREFAAAVHGGSIAAPDGRPFRKLLVVGIGGSALGPQFVADALG------DVDNPLTPHFFDNTDPDGMDRVLAQIGPDLAGTLTVVISKSGGTKET 184          
BLAST of DY260274 vs. ExPASy Swiss-Prot
Match: G6PI_CYAP8 (Glucose-6-phosphate isomerase OS=Cyanothece sp. (strain PCC 8801) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.090e-11
Identity = 64/203 (31.53%), Postives = 94/203 (46.31%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNP--ETTLVVVVSKTFTTAET---MLNAPTLREWISTALGPFAVAKHM 772
            GI LD SR       +D+L    + A  +  +  +  G   N  E R V H  LRAP + A N + +    E+ + L  I +F   + + +    T +   DV+++GIGGS LGP FV  AL +D   +       + F+ N DP  + + +T L    ++TLV+V SK+  T ET   ML      E       P AVA  M
Sbjct:   21 GIYLDISRMRFDDPFVDRLKPKFDKAFQD--MEALEAGAIANPDEGRMVGHYWLRAP-ELAPNDEARK---EITEPLAAIADFVTKVHNTTIKPPTAEKFTDVLSIGIGGSALGPQFVAEALSSDFPPM------AIHFIDNSDPAGIDRILTRLGDRLKSTLVIVTSKSGGTPETRNGMLEVKAAYEAKGLDFAPHAVAVTM 211          
The following BLAST results are available for this feature:
BLAST of DY260274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 443
Match NameE-valueIdentityDescription
G6PI_DESHY4.604e-1231.25Glucose-6-phosphate isomerase OS=Desulfitobacteriu... [more]
G6PI_PROMT7.853e-1229.21Glucose-6-phosphate isomerase OS=Prochlorococcus m... [more]
G6PI_PROMA7.853e-1229.15Glucose-6-phosphate isomerase OS=Prochlorococcus m... [more]
G6PI_CYAP41.340e-1128.78Glucose-6-phosphate isomerase OS=Cyanothece sp. (s... [more]
G6PI_CHLFF1.750e-1127.32Glucose-6-phosphate isomerase OS=Chlamydophila fel... [more]
G6PI_ANAVT1.750e-1132.42Glucose-6-phosphate isomerase OS=Anabaena variabil... [more]
G6PI_DESHD2.984e-1130.86Glucose-6-phosphate isomerase OS=Desulfitobacteriu... [more]
G6PI_SYNSC5.090e-1130.26Glucose-6-phosphate isomerase OS=Synechococcus sp.... [more]
G6PI_GEOMG5.090e-1130.73Glucose-6-phosphate isomerase OS=Geobacter metalli... [more]
G6PI_CYAP85.090e-1131.53Glucose-6-phosphate isomerase OS=Cyanothece sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260274 ID=DY260274; Name=DY260274; organism=Citrus clementina; type=EST; length=995bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAATGCTCCAACCTTGAGAGAATGGATATCAACTGCTCTTGGGCC
CTTCGCAGTTGCAAAGCACATGGTGGCTGTCAGTACTAATCTTACGCTGG
TAAAAAAGTTTGGCATTGATCCTAATAATGCATTTTCCTTCCGGGGACTG
GGTTGGTGGTCCGGTATAATTGTTTGCCGTGCCGGCCGGGGTTTTTCCCC
CCGTCCCCTTCATAAGGGTTTCCCCATTTGTTGAAAAAATTCCTAAAGGG
GGGCCTGGAAACCTTTCACCCACCATTTTCCTTTCCCGCCCCCTT
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