DY260276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.618e-13 Identity = 36/90 (40.00%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 137 VSGPRAR--LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEA 400 ++ PR R L+ + Q N C +CG+ +P+WVS++ G++IC++CSG HR LGVH+S V SV +D+W + +++ + + GGN + EA Sbjct: 1 MASPRTRKVLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKM-KAGGNAKFREFLEA 89
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: AGD8_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.618e-13 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 116 ANSDPKNVSGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIA-VNKKYEAYTPG 412 A+S N++ L + N+ C DC + +P W S++ G+F+CI CS HR+LGVHIS V S LD W+ EQ+ + G N A V K +T G Sbjct: 2 ASSSADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVRSTNLDSWSPEQLRTMMFGGNNRAQVFFKQHGWTDG 101
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: AGD9_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD9 OS=Arabidopsis thaliana GN=AGD9 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 9.583e-13 Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 2 Query: 131 KNVSGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIA 379 +N++ L + N+ C DC + +P W S+ G+F+CI CS +HRSLGVHIS V S LD W+ EQ+ + G N A Sbjct: 4 ENLTDKNVVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLRTMMFGGNNRA 86
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: ARFG2_RAT (ADP-ribosylation factor GTPase-activating protein 2 OS=Rattus norvegicus GN=Arfgap2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.252e-12 Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 140 SGP-RARLENLLRQ----PGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLD-EWTNEQVDALAEMGGN 373 +GP ++ ++ L ++ P N+ C DCG+ P W S++ GVF+CI CSG+HRSLGVH+S + S +LD W+ Q+ + ++GGN Sbjct: 3 AGPSKSEIQTLFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCM-QVGGN 85
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: ARFG2_BOVIN (ADP-ribosylation factor GTPase-activating protein 2 OS=Bos taurus GN=ARFGAP2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.252e-12 Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 179 PGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDE-WTNEQVDALAEMGGN 373 P N+ C DCG+ +P W S++ GVF+CI CSG+HRSLGVH+S + S +LD W+ Q+ + ++GGN Sbjct: 21 PTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSTWSWFQLRCM-QVGGN 85
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: ARFG1_MOUSE (ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus GN=Arfgap1 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.252e-12 Identity = 34/81 (41.98%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 137 VSGPRAR--LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGN 373 ++ PR R L+ + Q N C +CG+ +P+WVS++ G++IC++CSG HR LGVH+S V SV +D+W + +++ + + GGN Sbjct: 1 MASPRTRKVLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKM-KAGGN 80
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: GIT1_RAT (ARF GTPase-activating protein GIT1 OS=Rattus norvegicus GN=Git1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.635e-12 Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 2 Query: 143 GPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTN---EQVDALAEMGGNIAVNKKY--EAYTPGNLKKPNPNSFIDE-RSDFIRRKYEKLEF 493 GPRA + CADC +PDP W S+S GV +C +C +HRSLG HIS V ++ W + V LA G N A +K NP + +S+FIR KY+ L F Sbjct: 5 GPRAEV-----------CADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLRHSAWPPTLLQMVHTLASNGANSIWEHSLLDPAQVQSGRRKANPQDKVHPIKSEFIRAKYQMLAF 116
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: GIT1_MOUSE (ARF GTPase-activating protein GIT1 OS=Mus musculus GN=Git1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.635e-12 Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 2 Query: 143 GPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTN---EQVDALAEMGGNIAVNKKY--EAYTPGNLKKPNPNSFIDE-RSDFIRRKYEKLEF 493 GPRA + CADC +PDP W S+S GV +C +C +HRSLG HIS V ++ W + V LA G N A +K NP + +S+FIR KY+ L F Sbjct: 5 GPRAEV-----------CADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLRHSAWPPTLLQMVHTLASNGANSIWEHSLLDPAQVQSGRRKANPQDKVHPIKSEFIRAKYQMLAF 116
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: GIT1_HUMAN (ARF GTPase-activating protein GIT1 OS=Homo sapiens GN=GIT1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.635e-12 Identity = 45/123 (36.59%), Postives = 59/123 (47.97%), Query Frame = 2 Query: 143 GPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTN---EQVDALAEMGGNIAVNKKY--EAYTPGNLKKPNPNSFIDE-RSDFIRRKYEKLEF 493 GPRA + CADC +PDP W S+S GV +C +C +HRSLG HIS V ++ W + V LA G N A +K NP + +S+FIR KY+ L F Sbjct: 5 GPRAEV-----------CADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLRHSAWPPTLLQMVHTLASNGANSIWEHSLLDPAQVQSGRRKANPQDKVHPIKSEFIRAKYQMLAF 116
BLAST of DY260276 vs. ExPASy Swiss-Prot
Match: ARFG2_PONAB (ADP-ribosylation factor GTPase-activating protein 2 OS=Pongo abelii GN=ARFGAP2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.635e-12 Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 179 PGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLD-EWTNEQVDALAEMGGN 373 P N+ C DCG+ +P W S++ GVF+CI CSG+HRSLGVH+S + S +LD W Q+ + ++GGN Sbjct: 21 PTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWNWFQLRCM-QVGGN 85 The following BLAST results are available for this feature:
BLAST of DY260276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260276 ID=DY260276; Name=DY260276; organism=Citrus clementina; type=EST; length=1022bpback to top |