DY260279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 306.99 bits (785), Expect = 1.220e-82 Identity = 148/273 (54.21%), Postives = 205/273 (75.09%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVGRVAR 820 +VL +DRN YYGGES+S+ ++ L+KRF+ PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ A+CK+++CDPS++ ++V KVG+V R Sbjct: 29 KVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIR 299
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 305.834 bits (782), Expect = 2.717e-82 Identity = 146/273 (53.48%), Postives = 207/273 (75.82%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVGRVAR 820 +VL +D+N YYGGES+S+ ++ L+KRF+ QPPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ A+CK+++CDPS++ ++V KVG+V R Sbjct: 29 KVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIR 299
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDIB_PONAB (Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.717e-82 Identity = 147/273 (53.85%), Postives = 205/273 (75.09%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVGRVAR 820 +VL +DRN YYGGES+S+ ++ L+KR++ PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ A+CK+++CDPS++ ++V KVG+V R Sbjct: 29 KVLHMDRNPYYGGESASITPLEDLYKRYKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIR 299
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.717e-82 Identity = 146/273 (53.48%), Postives = 207/273 (75.82%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVGRVAR 820 +VL +D+N YYGGES+S+ ++ L+KRF+ QPPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ A+CK+++CDPS++ ++V KVG+V R Sbjct: 29 KVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIR 299
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDIB_CANFA (Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 7.905e-82 Identity = 147/273 (53.85%), Postives = 204/273 (74.73%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVGRVAR 820 +VL +DRN YYGGES+S+ ++ L+KRF+ PPA +G RD+N+D+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + E+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ A+CK+++CDPS++ ++V KVG+V R Sbjct: 29 KVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEVARCKQLICDPSYVKDRVEKVGQVIR 299
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 6.692e-81 Identity = 147/273 (53.85%), Postives = 196/273 (71.79%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVGRVARA 823 +VL +DRNDYYG +S+SLNL QL+ FR EQ P LG RD+ VD++PKF++ANG L +LI+TDVT+Y+ FK + GS+VY G++ KVP +MEALKSPLM +FEKRRA+KF +V +Y E+DP T++ +++ R + + K+GL T DFIGHA+AL+ DD YL +PA +T +R+ LYA SIA+F G SPYIYPLYGLGELPQ FARLSA+YGGTYMLN+P ++ + AK K+++ DPS+ KVR VGR+ RA Sbjct: 29 KVLHIDRNDYYGADSASLNLTQLYALFRPGEQRPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGTQDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKF-GKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVRA 300
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 6.707e-73 Identity = 137/279 (49.10%), Postives = 196/279 (70.25%), Query Frame = 2 Query: 5 QVLPLDRNDYYGGESSSLNLIQLWKRFRGN----EQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEF-DXXXXXXXXXXXXXTAKCKKVVCDPSHLPNKVRKVG-RVARA 823 +VL +D+ D+YGGE++S+ L QL+++F+ N E+ + G RD+NVD+IPKF++ANG L +LIHTDVT+Y+ FK V GS+V+ +GK++KVPA ++EA+ SPLMGIFEKRR +KF ++ Y E+D TH+G+DL + T E+ K+GL ++T +FIGHA+AL +D YL +PA + +R+ LY +S+AR+ G SPY+YP+YGLGELPQ FARLSA+YGGTYML+ P +V + T K V+ DP++ P K + G RV RA Sbjct: 34 KVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRA 311
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 7.520e-24 Identity = 77/287 (26.83%), Postives = 127/287 (44.25%), Query Frame = 2 Query: 8 VLPLDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHL---------------------------GSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDXXXXXXXXXXXXXTAKCKKVVCDPSHLP 787 VL LD N+YYG SS ++ L R +P + L SR +++D+ P+ + A G LV++LI +++ +Y F+AVD + + G++ VP + + + + I EKR KF DY E D + ++ T E + + + + A+A+ E ++R + + S+ R+ G +P+++P+YG GELPQ F RL AVYGG Y L + + D T + K VV P + P Sbjct: 34 VLHLDSNEYYGDVWSSFSMDALCARLDQEVEPHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGE-DKCNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSFEEG----MQRTQRFLGSLGRY-GNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKTLRAKNVVSAPGYTP 314
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: RAE2_MOUSE (Rab proteins geranylgeranyltransferase component A 2 OS=Mus musculus GN=Chml PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 4.874e-23 Identity = 62/192 (32.29%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 122 SRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKV 694 SR +N+D++ K + + G+L+ +LI ++V++Y FK V + +GKV +VP + + S + + EKR KF + DY+++ + E D + + + + L N FI H++A+ + + LD ++ K + + + RF G +P+I+PLYG GE+PQ F R+ AV+GG Y L +K +C V Sbjct: 225 SRRFNIDLVSKPLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFWEGKVEQVPCSRADVFNSKELSMVEKRMLMKFLTFCLDYEQH---SDEYQDFKQCSFSDYLKTKKLTPNLQHFILHSIAMTSES---SCTTLDGLQATKNFLQCLGRF-GNTPFIFPLYGHGEIPQCFCRMCAVFGGVYCLRHKVQCLV 409
BLAST of DY260279 vs. ExPASy Swiss-Prot
Match: RAE2_HUMAN (Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 9.192e-22 Identity = 58/191 (30.37%), Postives = 105/191 (54.97%), Query Frame = 2 Query: 125 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKV 694 R +N+D++ K + + G L+ +LI +DV++Y+ FK V + +GKV +VP + + S + + EKR KF + +Y+++ E + + E + L N F+ H++A+ + + +D + K + + + RF G +P+++PLYG GE+PQ F R+ AV+GG Y L +K +C V Sbjct: 227 RRFNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEYEQH---PDEYQAFRQCSFSEYLKTKKLTPNLQHFVLHSIAMTSES---SCTTIDGLNATKNFLQCLGRF-GNTPFLFPLYGQGEIPQGFCRMCAVFGGIYCLRHKVQCFV 410 The following BLAST results are available for this feature:
BLAST of DY260279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260279 ID=DY260279; Name=DY260279; organism=Citrus clementina; type=EST; length=1065bpback to top |