DY260288

Overview
NameDY260288
Unique NameDY260288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1042
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.423e-27
Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXI--XXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            RE+ +  A+LAEQAERY++M   M+ V +    E L+ E+RNLLSVAYKNV+GARR+SWR+ISSIEQK  + GN+  +  +K YR +IE EL   C+ + +  +   I        E KV+ LKMKGDY  YL E  +G++K    + +   YK
Sbjct:    4 REQLLQRARLAEQAERYDDMASAMKAVTELN--EPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYK 155          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.165e-27
Identity = 71/152 (46.71%), Postives = 100/152 (65.79%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            RE+ V +AKLAEQAERY++MVEFM+ +A+ +DV+ ++ EER L SV +K  IGARRASWRI+ S+EQK  + G+Q  V+ I  Y+ ++E+ELR  C+ + S      +      E  V+  KMKGDY  YL EF  G EKK   D++ + Y+
Sbjct:    4 REKVVRLAKLAEQAERYDDMVEFMKTLAR-MDVD-MSAEERLLFSVGFKKTIGARRASWRILESLEQKVTA-GDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.134e-27
Identity = 68/142 (47.89%), Postives = 92/142 (64.79%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXI--XXGXLDEFKVYILKMKGDY*GYLXEFKNGDEK 493
            RE+ V  A+LAEQAERY++M   M+ V +    E L+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK  + GN+  + +++ YR +IE EL   C  + +  +   I        E KV+ LKMKGDY  YL E   G+++
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKSVTELN--EALSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKMEMVRAYREKIEKELETVCRDVLNLLDNFLIKNCNETQHESKVFYLKMKGDYYRYLAEVATGEKR 143          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.067e-23
Identity = 59/117 (50.43%), Postives = 77/117 (65.81%), Query Frame = 2
Query:  176 ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIY 526
            ELT EERNLLSVAYKNV+GARR+SWR+ISSIEQK E  G++    + K+YR +IE EL+  C  + +  +   I      E KV+ LKMKGDY  YL E   GDE+++  +E+   Y
Sbjct:    4 ELTNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKDYREKIEKELKDICHEVLTLLDKFLIPKATTAESKVFYLKMKGDYYRYLAEVATGDERQKVIEESQRAY 118          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.797e-22
Identity = 60/145 (41.38%), Postives = 87/145 (60.00%), Query Frame = 2
Query:   65 DSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKE 499
            D S  + V++AKLAEQAERY++M   M++  +      L  EERNLLSVAYKNV+GARR++WR+I   E K  +  ++    + +EYR ++E EL   C+ + +  E   +     D+ KV+ LKM+GDY  YL E    D + E
Sbjct:   11 DLSNTDLVHIAKLAEQAERYDDMAAAMKRYTEASG--NLGNEERNLLSVAYKNVVGARRSAWRVIHGSEMK--AVNDRTKKQIAEEYRIKMEKELNTICNQVLALLEDYLLPNASPDDSKVFFLKMQGDYYRYLAEVATDDARTE 151          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.521e-21
Identity = 63/146 (43.15%), Postives = 88/146 (60.27%), Query Frame = 2
Query:   62 TDSSREEN---VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDE 490
            TDS  +++   V +AKLAEQAERYE+M   M+ +A+  +  EL  EERNLLSVAYKNV+GARR+SWRI+SSI +K+      D   +   Y  ++E EL   C+ + +      I      E K++  KM GDY  YL E + G++
Sbjct:    9 TDSGCKDHASLVSIAKLAEQAERYEDMAVAMKTIAEMGN--ELNNEERNLLSVAYKNVVGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQ 149          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.521e-21
Identity = 63/146 (43.15%), Postives = 88/146 (60.27%), Query Frame = 2
Query:   62 TDSSREEN---VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDE 490
            TDS  +++   V +AKLAEQAERYE+M   M+ +A+  +  EL  EERNLLSVAYKNV+GARR+SWRI+SSI +K+      D   +   Y  ++E EL   C+ + +      I      E K++  KM GDY  YL E + G++
Sbjct:    9 TDSGCKDHASLVSIAKLAEQAERYEDMAVAMKTIAEMGN--ELNNEERNLLSVAYKNVVGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQ 149          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 7.067e-19
Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 2
Query:   77 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDE 490
            +E V  AKLAEQAERY++M    + +A+  +  EL  EERNLLSVAYKNV+GARR+SWRI+SSI +K+      D   +   Y  ++E EL   C+ + +      I      E K++  KM GDY  YL E + G++
Sbjct:   14 DELVQRAKLAEQAERYDDMAGACKTMAEMGN--ELNNEERNLLSVAYKNVLGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELIPICNDVLA-LPVLPITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQ 145          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.333e-17
Identity = 62/141 (43.97%), Postives = 74/141 (52.48%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKK 496
            + E V  AKLAEQAERY++M   M+ V  T    EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E   N+    + KEY                                     KMKGDY  YL E  +GD K+
Sbjct:    5 KSELVQKAKLAEQAERYDDMAAAMKAV--TEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEY-------------------------------------KMKGDYFRYLSEVASGDNKQ 104          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.615e-17
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 2
Query:   77 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDE 490
            +E V  AKLAEQAERY++M    + +AK  +  EL  EE NLLSVAYKNV+GARR+SWRI+SSI +K+          +   Y  ++E EL   C+ + +      I      E K++  KM GDY  Y  E + G++
Sbjct:   14 DELVQRAKLAEQAERYDDMAGACKTMAKMRN--ELNNEEANLLSVAYKNVVGARRSSWRIMSSIAKKQAGTPLAHQHDI---YLKKVEEELIQICNDVLA-LPVLPITEKIGAEAKIFYYKMMGDYYRYSAEVQEGEQ 145          
The following BLAST results are available for this feature:
BLAST of DY260288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
1433F_BOVIN2.423e-2745.4514-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
14338_ORYSJ3.165e-2746.71Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
143G1_ONCMY4.134e-2747.8914-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
14332_SCHMA8.067e-2350.4314-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
14331_SCHMA1.797e-2241.3814-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14332_ECHMU1.521e-2143.1514-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14332_ECHGR1.521e-2143.1514-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]
14331_ECHMU7.067e-1942.7514-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
1433B_SHEEP1.333e-1743.9714-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
14331_ECHGR6.615e-1741.3014-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YA16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260288 ID=DY260288; Name=DY260288; organism=Citrus clementina; type=EST; length=1042bp
TCCTCCCTAAAATTTCGATCGAATCCGTATTCCCCAACCTTAAAACGCTA
AGATGTCCCCTACTGATTCCTCTCGCGAGGAAAATGTCTACATGGCCAAG
CTGGCCGAGCAGGCTGAACGTTATGAGGAAATGGTTGAGTTCATGGAAAA
AGTTGCCAAAACAGTTGATGTTGAGGAGCTAACCGTGGAGGAAAGGAACC
TTCTCTCCGTTGCCTACAAGAATGTGATTGGGGCCAGGAGGGCTTCCTGG
AGGATCATCTCTTCGATTGAGCAGAAGGAGGAGAGCAGGGGAAACCAAGA
CCATGTCTCAGTAATTAAGGAGTACAGGAGCCAGATTGAGAATGAGCTCC
GCATCATNTGTGATGGGATTNTTAGTNNTTTTGAGTTTNATNTTATTTNN
TNTGGTTNATTGGATGAGTTTAAGGTGTATATATTGAAGATGAAGGGTGA
TTATTAGGGGTATTTGGNTGAGTTTAAGAATGGAGATGAGAAGAAGGAAG
ATTGGGATGAGAATTGGGTGATATATAAGTTAATTGGGATAGTGATTTAG
TTTAGTTGAATATAATTAAGTAATAAGTAAGGTGTGGTATATAGGATTTT
AGTGTTATGATTAGAAAAATGTTTATTATGTTAAAGGGGTAAGATTAGGA
TATATTTGATTAGTTATGAATTATTAGAGATATATTGTGTGTGTATGAAT
TTGGATGAGGAGGAGGGAATTGAAAGTGATTTAGTTATATAGATGGAGAA
TAAAATAATTTAATATGATTAATAAGGATGTAAGAATGAGTGTTATGAAG
TGTTTTAGGTATGGTTTTTTTTATAAAATTTAGATAAATATAGGTGAATA
GTATAGAAATATAGAAATGGAGTTATTATTAGATGTGAATTATTAAAAGG
ATATGAAATATTGAAGAGGAGAGGGAAGGGGAAGTATAAAGATGGATAAG
GAATGGGGTTTTTAGATTGTAAATGTTTATAATAAGTAATAGTAAATAAA
ATATTAAAAATAAGAAAAAATAAAAATATATATATAAAATAA
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