DY260288

Overview
NameDY260288
Unique NameDY260288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1042
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260288_ssr1026 microsatellite DY260288_ssr1026:1026..1035. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.673e-34
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 2
Query:   77 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIY 526
            E+ V+++KLAEQ+ERY+EMV++M++VA      EL+VEERNLLSVAYKNVIG+RRASWRII+S+EQKE+++GN  HV +IK YR++IE+EL   CD +    +   +      E KV+  KM+GDY  Y  EF   ++++E  D++   Y
Sbjct:    2 EDCVFLSKLAEQSERYDEMVQYMKQVAALNT--ELSVEERNLLSVAYKNVIGSRRASWRIITSLEQKEQAKGNDKHVEIIKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKSLAAY 149          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.041e-33
Identity = 80/155 (51.61%), Postives = 106/155 (68.39%), Query Frame = 2
Query:   68 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYKL 532
            +SR++ VYMAKLAEQAER++EMV+ M+ VA+    +EL+VEERNLLSVAYKNVIG+RRASWR+ISSIE K+      D + +I++Y+S+IE EL   C  I    E   I     +E KV+  KMKGDY  YL EF++ DE+K    +    Y+L
Sbjct:    2 ASRDDLVYMAKLAEQAERFDEMVDHMKAVAQ--QPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTV---SDQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQL 151          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433_EIMTE (14-3-3 protein OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.622e-31
Identity = 76/162 (46.91%), Postives = 99/162 (61.11%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKT----------VDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            REE+VY AKLAEQAERY+EM E M+ + +              +ELTVEERNLLSVAYKN +GARRASWRIISS+EQKE +R +  + ++   YR ++ENEL   C  I +      +      E +V+  KMKGDY  Y+ EF N + KK   ++    YK
Sbjct:    9 REEHVYRAKLAEQAERYDEMAEAMKNLVENCLDQNNSPPGAKGDELTVEERNLLSVAYKNAVGARRASWRIISSVEQKEANRNHMANKALAASYRQKVENELNKICQEILTLLTDKLLPRTTDSESRVFYFKMKGDYYRYISEFSNEEGKKASAEQAEESYK 170          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.118e-31
Identity = 69/112 (61.61%), Postives = 81/112 (72.32%), Query Frame = 2
Query:  194 RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            RNLLSVAYKNV+GARRASWRIISSIEQKEESRGN+DHVSVI++YRS+IE EL   CDGI    +   +      + KV+ LKMKGDY  YL EFK G ++KE  +     YK
Sbjct:    1 RNLLSVAYKNVVGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSRIEKELSDNCDGILKLLDTKLVPAASSGDSKVFYLKMKGDYHRYLAEFKTGAQRKEAAESTLTAYK 112          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 14337_ORYSJ (14-3-3-like protein GF14-G OS=Oryza sativa subsp. japonica GN=GF14G PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.049e-31
Identity = 79/149 (53.02%), Postives = 96/149 (64.43%), Query Frame = 2
Query:   53 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKE 499
            M+P+D    + VYMAKLAEQAERY+EMVE M  VAK    E LT EERNLLSV YKN+IGA+RA+ RII SIE KEE++G + HV    EYR ++E E+   C  + +  +   I      E  V+  KMKGDY  YL EFK G EK E
Sbjct:    1 MAPSD----DLVYMAKLAEQAERYDEMVEAMNSVAKLD--EGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDKYLIPHSSGAESSVFYYKMKGDYYRYLAEFKTGTEKIE 143          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.373e-30
Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKK 496
            R   +  AKLAEQAERYE+M  FM+   +    EEL+ EERNLLSVAYKNV+G +RA+WR++SSIEQK    G+++    +KEYR ++E ELR  CD +    +   I      E +V+ LKMKGDY  YL E   GD+KK
Sbjct:    3 RASLIQKAKLAEQAERYEDMAAFMKSAVEKG--EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVKEYREKVETELRGVCDTVLGLLDSHLIKGAGDAESRVFYLKMKGDYYRYLAEVATGDDKK 141          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.793e-30
Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTV-----DVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDE 511
            R+E VY AKLAEQAERY+EM E M+ + +         +EL+VEERNLLSVAYKN +GARRASWRIISS+EQKE S+ +  + ++  EYR ++E EL   C  I        I      E KV+  KMKGDY  Y+ EF   + KK+  D+
Sbjct:    9 RDEYVYKAKLAEQAERYDEMAEAMKNLVENCLDEQQPKDELSVEERNLLSVAYKNAVGARRASWRIISSVEQKELSKQHMQNKALAAEYRQKVEEELNKICHDILQLLTDKLIPKTSDSESKVFYYKMKGDYYRYISEFSGEEGKKQAADQ 159          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.995e-30
Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            + E V  AKLAEQAERY++M   M+ V  T    EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E  G +    + +EYR +IE ELR  C+ + S  E   I      E KV+ LKMKGDY  YL E   GD+KK   D++   Y+
Sbjct:    3 KNELVQKAKLAEQAERYDDMAACMKSV--TEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQ 150          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.995e-30
Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            + E V  AKLAEQAERY++M   M+ V  T    EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E  G +    + +EYR +IE ELR  C+ + S  E   I      E KV+ LKMKGDY  YL E   GD+KK   D++   Y+
Sbjct:    3 KNELVQKAKLAEQAERYDDMAACMKSV--TEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQ 150          
BLAST of DY260288 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.217e-30
Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 2
Query:   74 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNQDHVSVIKEYRSQIENELRIXCDGIXSXFEFXXIXXGXLDEFKVYILKMKGDY*GYLXEFKNGDEKKEDWDENWVIYK 529
            + E V  AKLAEQAERY++M   M+ V  T    EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E  G +    + +EYR +IE ELR  C+ + S  E   I      E KV+ LKMKGDY  YL E   GD+KK   D++   Y+
Sbjct:    3 KNELVQKAKLAEQAERYDDMAACMKSV--TEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQ 150          
The following BLAST results are available for this feature:
BLAST of DY260288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
14333_ENTHI2.673e-3450.0014-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]
1433_FUCVE5.041e-3351.6114-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
1433_EIMTE1.622e-3146.9114-3-3 protein OS=Eimeria tenella PE=2 SV=1[more]
1433_SPIOL2.118e-3161.6114-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
14337_ORYSJ8.049e-3153.0214-3-3-like protein GF14-G OS=Oryza sativa subsp. ... [more]
1433S_MOUSE1.373e-3049.6514-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]
1433_NEOCA1.793e-3049.0114-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
1433Z_RAT3.995e-3050.6614-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_MOUSE3.995e-3050.6614-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433Z_PONAB5.217e-3050.6614-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YA16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260288 ID=DY260288; Name=DY260288; organism=Citrus clementina; type=EST; length=1042bp
TCCTCCCTAAAATTTCGATCGAATCCGTATTCCCCAACCTTAAAACGCTA
AGATGTCCCCTACTGATTCCTCTCGCGAGGAAAATGTCTACATGGCCAAG
CTGGCCGAGCAGGCTGAACGTTATGAGGAAATGGTTGAGTTCATGGAAAA
AGTTGCCAAAACAGTTGATGTTGAGGAGCTAACCGTGGAGGAAAGGAACC
TTCTCTCCGTTGCCTACAAGAATGTGATTGGGGCCAGGAGGGCTTCCTGG
AGGATCATCTCTTCGATTGAGCAGAAGGAGGAGAGCAGGGGAAACCAAGA
CCATGTCTCAGTAATTAAGGAGTACAGGAGCCAGATTGAGAATGAGCTCC
GCATCATNTGTGATGGGATTNTTAGTNNTTTTGAGTTTNATNTTATTTNN
TNTGGTTNATTGGATGAGTTTAAGGTGTATATATTGAAGATGAAGGGTGA
TTATTAGGGGTATTTGGNTGAGTTTAAGAATGGAGATGAGAAGAAGGAAG
ATTGGGATGAGAATTGGGTGATATATAAGTTAATTGGGATAGTGATTTAG
TTTAGTTGAATATAATTAAGTAATAAGTAAGGTGTGGTATATAGGATTTT
AGTGTTATGATTAGAAAAATGTTTATTATGTTAAAGGGGTAAGATTAGGA
TATATTTGATTAGTTATGAATTATTAGAGATATATTGTGTGTGTATGAAT
TTGGATGAGGAGGAGGGAATTGAAAGTGATTTAGTTATATAGATGGAGAA
TAAAATAATTTAATATGATTAATAAGGATGTAAGAATGAGTGTTATGAAG
TGTTTTAGGTATGGTTTTTTTTATAAAATTTAGATAAATATAGGTGAATA
GTATAGAAATATAGAAATGGAGTTATTATTAGATGTGAATTATTAAAAGG
ATATGAAATATTGAAGAGGAGAGGGAAGGGGAAGTATAAAGATGGATAAG
GAATGGGGTTTTTAGATTGTAAATGTTTATAATAAGTAATAGTAAATAAA
ATATTAAAAATAAGAAAAAATAAAAATATATATATAAAATAA
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