DY260292

Overview
NameDY260292
Unique NameDY260292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1116
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.413e-44
Identity = 89/136 (65.44%), Postives = 102/136 (75.00%), Query Frame = 3 
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPFLQK 581
            M T G+VI CKAAVAWEP K L IE+V+VAPP A EVRIK+  T +CHTDAYT SG DPEGLFP ILGHE AG VESVGEGVT+ +PGD VIP Y  +C ECKFCK+ KTNLC K+R   G G+ + D+ S F  K
Sbjct:    1 METAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQGL-LPDKTSRFTCK 135
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.485e-44
Identity = 82/132 (62.12%), Postives = 98/132 (74.24%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            +T GQVI C+AAVAWE  K LVIE+V+VAPPQAGEVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT ++PGDH +P +  EC EC  CKS ++N+C  +R  T  GV +ND +S F
Sbjct:    3 NTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRINTDRGVMINDNKSRF 134

HSP 2 Score: 26.1794 bits (56), Expect = 1.485e-44
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 
Query:  562 RALFSKNGTPIHPFLGTST 618
            ++ FS  G P+H F+GTST
Sbjct:  131 KSRFSIKGQPVHHFVGTST 149
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.521e-44
Identity = 81/132 (61.36%), Postives = 98/132 (74.24%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            +T GQ+I C+AAVAWE  K LVIE+V+VAPPQAGEVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT ++PGDH +P +  EC EC  CKS ++N+C  +R  T  GV +ND +S F
Sbjct:    3 NTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRF 134

HSP 2 Score: 26.1794 bits (56), Expect = 2.521e-44
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 
Query:  562 RALFSKNGTPIHPFLGTST 618
            ++ FS  G P+H F+GTST
Sbjct:  131 KSRFSIKGQPVHHFVGTST 149
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.286e-44
Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            +T GQVI CKAAVAWE  K LV+E+V VAPPQ  EVR+KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++N+C  +R  T  GV +ND QS F
Sbjct:    3 TTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRF 134

HSP 2 Score: 26.1794 bits (56), Expect = 3.286e-44
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  571 FSKNGTPIHPFLGTST 618
            FS NG PI+ F+GTST
Sbjct:  134 FSINGKPIYHFVGTST 149
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.282e-44
Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            +T GQVI CKAAVAWE  K LV+E+V VAPPQ  EVR+KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++N+C  +R  T  GV +ND QS F
Sbjct:    3 TTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRF 134

HSP 2 Score: 26.1794 bits (56), Expect = 4.282e-44
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  571 FSKNGTPIHPFLGTST 618
            FS NG PI+ F+GTST
Sbjct:  134 FSINGKPIYHFVGTST 149
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.580e-44
Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            +T GQVI CKAAVAWE  K LV+E+V VAPPQ  EVR+KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++N+C  +R  T  GV +ND QS F
Sbjct:    3 TTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRF 134

HSP 2 Score: 26.1794 bits (56), Expect = 5.580e-44
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  571 FSKNGTPIHPFLGTST 618
            FS NG PI+ F+GTST
Sbjct:  134 FSINGKPIYHFVGTST 149
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 7.272e-44
Identity = 82/133 (61.65%), Postives = 98/133 (73.68%), Query Frame = 3 
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            MST GQ+I CKAAVAWE  K LVIE+V+VAPPQ  EVRIKILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC EC+ C S ++N+C  +R  T  G  ++D +S F
Sbjct:    1 MSTTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRF 133

HSP 2 Score: 27.335 bits (59), Expect = 7.272e-44
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  571 FSKNGTPIHPFLGTST 618
            FS NG PI+ FLGTST
Sbjct:  133 FSINGKPIYHFLGTST 148
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 9.160e-44
Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            ST GQVI CKAAVAW     L IE +QVAPP+A EVR+KIL+TA+CHTDAYT  G DPEGLFP +LGHE +GIVESVGEGVT   PGDHV+P Y  +C+EC++CK+ KTNLC K+R + G G  M D  S F
Sbjct:    3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGF-MPDGSSRF 133
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 9.160e-44
Identity = 87/135 (64.44%), Postives = 102/135 (75.56%), Query Frame = 3 
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPFLQK 581
            +T GQVI CKAAVAWE  K L +E+V+VAPP+AGEVRIK++ T +CHTDAYT SG DPEG FP ILGHE AG+VESVGEGVT+ + GD VIP Y  +C ECKFCK+ KTNLC K+R   G G+ M D  S F  K
Sbjct:    1 ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGL-MPDNTSRFTCK 134
[Close]
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 9.476e-44
Identity = 81/133 (60.90%), Postives = 99/133 (74.44%), Query Frame = 3 
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            M+T G+VI CKAAVAWE  K LVIE+V+VAPPQA EVR+KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEGVT++ PGDHV+P +  EC+EC  CKS ++N+C  +R  T  GV + D +S F
Sbjct:    1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRF 133

HSP 2 Score: 26.5646 bits (57), Expect = 9.476e-44
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:  562 RALFSKNGTPIHPFLGTST 618
            ++ FS NG PI+ F+GTST
Sbjct:  130 KSRFSINGKPIYHFVGTST 148
The following BLAST results are available for this feature:
BLAST of DY260292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
ADHX_SPAAU1.413e-4465.44Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADH1_TRIRP1.485e-4462.12Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_PEA2.521e-4461.36Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH2_SOLTU3.286e-4462.12Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH3_SOLTU4.282e-4462.12Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU5.580e-4462.12Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_ARATH7.272e-4461.65Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADHX_CAEEL9.160e-4464.39Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHH_GADMO9.160e-4464.44Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADH1_ORYSJ9.476e-4460.90Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YA21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260292 ID=DY260292; Name=DY260292; organism=Citrus clementina; type=EST; length=1116bp
GGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTTAGAAAAATCTC
ACATCTGTTGCCGGCAGCCACTCTCAGACCGTGTCACGTCCCTTTTTAAT
AATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTTTCAT
TCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTCAAGTCATCACA
TGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTGAGGA
TGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAATCAAGATTCTCT
TCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCGGCAAGGATCCT
GAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGTGGA
GAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCATCC
CTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCCGGAAAG
ACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGCGCCGGTGTCCAGAT
GAATGACCGCCAGAGCCCTTTTCTCCAAAAATGGGACACCCATCCATCCC
TTCCTGGGAACCTCAACCTCTACCCCCCACCCCCCCCTTTGCAGGACGTC
ACTGTCCACAAACAAAGACCCACCCACGCCCCTTCGAACAAAATAAGCCC
TCCCTTCCTGCAGGCGGCCCCACCCCTCTCATGAAGACACCGCGAACACC
CAACAAAAACAAACACCCGGACCCAACAACTCCGCAACAATATGCCCCAA
GGAACCGCTCCCCCCGATTCCAGGGCGCACACGGTCCCTAACAGACGATC
CTACACCCCCCACCCGATAATACGGCCAATCCTACCAGTCACCCCACAAT
CCCCTCTCGCCCGCACACCTCACAGCACCTCTCACCCACCCTACCACCCC
TCCTCACATCGCCCCCCAACACAGATACTACCCACCTCTCTCCCACACAG
TCCTGCCTACTGGCCCCACACCCCCAGAACCGCCCCCAGCGACCACCCAT
CTCACCTCTGGCGAACATACACCCCCTCACCCTTCACGTAAACTCACCCC
AACTCTATCCCAACCC
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