DY260298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.200e-41 Identity = 79/151 (52.32%), Postives = 115/151 (76.16%), Query Frame = 1 Query: 7 WTTTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 459 +T +CCSHPL EL E +A+GV+ AAQR+L ELGI E+V +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+LKEL++KA +GE +KL+PWF+++VD FLFKWWD+L L++ +D + IH++ Sbjct: 81 FTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYKAQSDGIWGEHEIDYILFLKKNVTLNPDPNEIKSYCYVSKEELKELVKKAASGE--VKLTPWFKIIVDTFLFKWWDNLNH--LSQFVDHEKIHRM 227
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 8.362e-41 Identity = 79/151 (52.32%), Postives = 111/151 (73.51%), Query Frame = 1 Query: 7 WTTTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 459 +T TCCSHPL SEL E +A+GVR AAQR+L ELGI E+VP +E L RI YKA SD WGEHE+DY+L + ++V++NP+P+E+ Y YV +E+L+EL+ KA GE +K++PWF+++ D FLFKWWD+L + LN +D + IH++ Sbjct: 81 FTNTCCSHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPDPNEIKSYCYVTKEELEELIGKAAHGE--IKITPWFQIIADTFLFKWWDNLNR--LNLFVDHEKIHRM 227
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.092e-40 Identity = 77/151 (50.99%), Postives = 114/151 (75.50%), Query Frame = 1 Query: 7 WTTTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 459 +T +CCSHPL EL E NA+GV+ AA+R+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+++E+L+KA +GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH+L Sbjct: 81 FTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVTLNPDPNEIKSYCYVSKEEVREILKKAASGE--IKLTPWFKIIADTFLFKWWDNLNH--LSPFVDHEKIHRL 227
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 3.177e-40 Identity = 77/151 (50.99%), Postives = 112/151 (74.17%), Query Frame = 1 Query: 7 WTTTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 459 +T +CCSHPL EL E +A+GV+ AAQR+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+LKE+L+K GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH++ Sbjct: 81 FTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVTLNPDPNEIKSYCYVSKEELKEILKKEARGE--IKLTPWFKIIADAFLFKWWDNLNH--LSPFVDHEKIHRM 227
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.430e-32 Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 4 VWTTTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHL-----EKGTLNEVIDMKTIHKLT 462 +WT TCCSHPL + E+ EEN +GVR AA RKL ELG+ P D FT L RI Y APSDG WGEHE+DY+LF NP+EV++ +YV + +L+ + +E +PWF+L+ +FLF WWD L EKG +D K++ L+ Sbjct: 96 MWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYILFSTTPTEHTGNPNEVSDTRYVTKPELQAMFE-----DESNSFTPWFKLIARDFLFGWWDQLLARRNEKGE----VDAKSLEDLS 244
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 5.432e-32 Identity = 71/143 (49.65%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 4 VWTTTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWW---DHLEK 414 +WT TCCSHPL E + E GV+NAAQRKL ELGI A+ +P D+F L RI Y APS G WGEHE+DY+LF V ++ NP+EV YKYV E+LKE+ G +PWF+L+ ++F+FKWW DH K Sbjct: 81 LWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYILFFKGKVELDINPNEVQAYKYVTMEELKEMFSDPQYG-----FTPWFKLICEHFMFKWWQDVDHASK 218
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.338e-30 Identity = 70/155 (45.16%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 7 WTTTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS--DGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVID-MKTIHK 456 WT T CSHPL+ SEL+EENA GV+ AA+RKL ELG+ + V +D+FT + +I YK+ S D +WGEHE+D++L + +D +++N P+EV +YKYV++E+L +L + D G+ +K++PWFRL+ N L WW++L L +++ TIH+ Sbjct: 88 WTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKDGITINAEPNEVMDYKYVSQEELDQLFKDEDEGK--VKVTPWFRLIALNHLKPWWNNL--NNLKPLVEPTNTIHR 238
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.296e-29 Identity = 62/151 (41.06%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 7 WTTTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 459 +T +C SHPLY +EL E++A+GVR AAQR+L ELGI E + ++ + +KA SD WGEHE+ YLL + ++V++NP+P E Y+++E+L ELL + GE +K++PW R + + FL++WW HL+ T +++ IH++ Sbjct: 81 FTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEELWELLEREARGE--VKVTPWLRTIAERFLYRWWPHLDDVT--PFVELHKIHRV 227
BLAST of DY260298 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.296e-25 Identity = 63/162 (38.89%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 4 VWTTTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKWGEHELDYLLF----IVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 459 +WT TCCSHPL + EL +++ G AA RKL ELGI ++ +F L RI Y APS+ WGEHE+DY+LF +++VNPN +EV ++K+V+ LK + + K +PWF+++ +N+LF WW+ L+ L+EV + + IH++ Sbjct: 133 LWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYILFYKINAKENLTVNPNVNEVRDFKWVSPNDLKTMF-----ADPSYKFTPWFKIICENYLFNWWEQLD--DLSEVENDRQIHRM 287 The following BLAST results are available for this feature:
BLAST of DY260298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260298 ID=DY260298; Name=DY260298; organism=Citrus clementina; type=EST; length=1242bpback to top |