DY260301

Overview
NameDY260301
Unique NameDY260301
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1227
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.017e-22
Identity = 71/186 (38.17%), Postives = 99/186 (53.23%), Query Frame = 1
Query:  190 EKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAI-NDALSAEGAAEDYETCLKHLTKSNILAT---SAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGKSSAV 735
            E+G  T+ LSGG+   + + L E     ++ W K HVFW DER V  DH DSN ++A   +L +V I   N++ +   A   E  A+ YE         N LAT     A  FP FDL+LLG+G DGH ASLFP  P L   ++ +T      +P   R+TFT P+I+ +  +  +V GA K  A+
Sbjct:   32 ERGQGTIALSGGN---TPKPLYEALARQALPWEKIHVFWGDERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYE---------NELATFFQVEAGHFPAFDLILLGLGDDGHTASLFPHTPALTVGDRLITVGNKDGQP---RLTFTIPLINRARSVVFLVAGASKQHAL 202          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.274e-21
Identity = 69/239 (28.87%), Postives = 112/239 (46.86%), Query Frame = 1
Query:  109 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG-AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEK--WVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGKSSAVPTALGNNQNS*LPPVPRAPAEKKISWF 816
            + V   E++L + L +Y  +       + G+ ++ +SGGS+     K +     + + W +  +F VDER V  D ++SN       +L   P    +V+            A+ YE  L+       L  +A     +FD++ LG+GPDGH AS+FPG   L++  +  WV+ I DSPKPPP RIT T   +  +  +A ++CG  K+  V      +Q    P     P   K++ F
Sbjct:   17 LNVSGDEKELILQLRRYLEEKLTYLLDQNGTVSIGVSGGSMPRVFSKAILSLPQEQLNWKRIRIFMVDERNVDLDSEESNQ----GEYLRLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTA-----RFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKAEIVRGICDRDQK--YPAAQARPFNDKLTLF 244          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.725e-20
Identity = 81/252 (32.14%), Postives = 122/252 (48.41%), Query Frame = 1
Query:  109 VQVFDSEEDLAVSLAKYTADL--SAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYV-DSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGN-------VYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG---HPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGKSSAVPTALGNNQNS*LPPV-PRAPAEKKISWF 816
            +Q F  ++ L     K+  +   SA  G     F + +SGGS+  +L   LV    +   I+W +W +F+ DER+VP +   SNY       L  + +  GN       VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG   + L++E ++ V +  +SPK P +RITFT  V+  +  +  +V GA K + +   L   +NS LP V        K++WF
Sbjct:    4 LQRFSEKKSLIHEFGKFILEKQESALTGDADAVFNIAISGGSMNQALYESLVNDKNIFPHIKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPL-VHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMHDVL-IVKNSELPSVLVNEMVGTKVTWF 242          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.053e-19
Identity = 70/216 (32.41%), Postives = 104/216 (48.15%), Query Frame = 1
Query:  178 KFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGKSSAVPTALGNNQNS*LPPVPR--APAEKKISWF 816
            K  +EK    VVL+GG   +    KL E  +     W + H F  DER VP D D SN++   +   S+  I +GNV+ ++ +L  E A E YE  ++  T              +FDL +LGMGPDGH+AS+F      K+N   VTF   S  P   R+T TF  +++S Y+  ++ G  K + +   L +       P+P      ++K  WF
Sbjct:   27 KLLEEKDKIFVVLAGGRTPLPVYEKLAEQKF----PWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-------------DQFDLAILGMGPDGHVASIFDLETGNKDN--LVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT------PLPAYFVRGKEKTVWF 217          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.287e-17
Identity = 73/218 (33.49%), Postives = 102/218 (46.79%), Query Frame = 1
Query:  136 LAVSLAKYTADLSAKFGKEKGSFTVVLSGG-SLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKD----SPKPPPERITFTFPVIHSSAYIAMVVCGAGKSSAVPTALGNNQNS*LP 774
            LA +LA   A+        KG   VVLSGG S +  L KL   P    ++WAK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L+      +  +     +P  P +R++ T  ++ S+A+IA+ V G GK + +  AL  N  + +P
Sbjct:   28 LAATLAHDVAERLRAAIAAKGQACVVLSGGRSPVPFLEKLASEP----LDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAAFIALSVQGPGKLATLRAALAGNDLTEMP 227          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.407e-16
Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 1
Query:  130 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGK 723
            E+L   LA      + +  +  G F + LSGGS  I   ++L    Y  S  WA  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P   + ++ V  + +SP  P +R++ + P+I+ +  +A++V G  K
Sbjct:  559 EELISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHY--SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSPTGLDGDQLVV-LTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTK 749          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 4.577e-15
Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  130 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGK 723
            E+L   LA      + +  +  G F + LSGGS   +L ++L    Y     WA  H++ VDER VP    +SN++      L  V I   N++ +   L     AE+ +    +  + + L  +++     FDL+LLGMG DGH ASLFP  P   + E+ V  +  SP  P  R++ + P+I+ +  +A++V G  K
Sbjct:  561 EELISKLANDIEATAVRAVRRFGQFHLALSGGSSPVALFQQLATAHY--GFPWAHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS-----FDLVLLGMGADGHTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMK 751          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_RHIME (6-phosphogluconolactonase OS=Rhizobium meliloti GN=pgl PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.967e-14
Identity = 68/244 (27.87%), Postives = 111/244 (45.49%), Query Frame = 1
Query:  109 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVT----FIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGKSSAVPTALGNNQNS*LP---PVPRAPAEKKISWFP 819
            + +F++   LA +LA       A     +G+ ++ +SGGS   +  + +    +D   W+K  V  VDER VP ++D SN++L  D  L         V     A +AE AA            +     +A+ G P  D+++LGMG DGH AS FPG   L+E     T       ++      R+TFTF  +  + Y+ + + G+GK   +  A  +   + +P    + RA +  +I W P
Sbjct:    5 MHIFENPSALAEALADDVGARLAAAIAARGTASLAVSGGSTPKAFFRSLSRRELD---WSKVTVTLVDERFVPPENDRSNHRLVADNLLKDGAAEARFVPLYQAAETAEAAA------------AIASGRTASLGAP-LDVVVLGMGTDGHTASFFPGGTRLEEALDPTTPRGVITMEAEGAGEPRLTFTFSSLQDAGYLVLHIEGSGKKEVLAQAEASGDEAEMPIRAMLRRAASPLQIYWAP 232          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.544e-13
Identity = 48/172 (27.91%), Postives = 78/172 (45.35%), Query Frame = 1
Query:  208 VVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGK 723
            + LSGGS    + +     +   ++W +   FW DER VP     SN+ + +   L  + I    V+ +    + E A   Y   ++              G P FD++LLGMG DGH AS+FP H +   +      +   P    +R++FT  +I+++  I +VV G  K
Sbjct:   32 LALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIE-------ARLPRQRGVPCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREK 195          
BLAST of DY260301 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLMU (6-phosphogluconolactonase OS=Chlamydia muridarum GN=pgl PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.246e-12
Identity = 56/203 (27.59%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  115 VFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVIHSSAYIAMVVCGAGK 723
            + +S+ED            + K  +++G+F V LSGG     + + +        + +K  VFW DER        SNY  A D  L  + I    ++ + D  + +G  E YE  ++      I           FD+++LG+G DGH  SLFPG   L+E ++ V F  + P+    R+T TFP++  + ++   + G  K
Sbjct:   15 IAESQEDFLQIACYDWISTANKAIQKRGAFYVALSGGKTPLQIFQEIVKKRAAISDCSKIFVFWGDERASEDTEAGSNYLKAMD-ILKWLRIPDTQIFRM-DTANPKGD-EIYENLIREHVPDTI-----------FDMVMLGVGEDGHTLSLFPGTAALEEKDRLVVF-NEVPQLQTRRMTLTFPIVRQARHLVAYIQGTAK 202          
The following BLAST results are available for this feature:
BLAST of DY260301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
6PGL_SYNY31.017e-2238.176-phosphogluconolactonase OS=Synechocystis sp. (st... [more]
6PGL_CAEEL4.274e-2128.87Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
SOL4_YEAST4.725e-2032.146-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
6PGL_THEMA1.053e-1932.416-phosphogluconolactonase OS=Thermotoga maritima G... [more]
6PGL_PSEPU1.287e-1733.496-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
G6PE_MOUSE5.407e-1631.16GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PE_HUMAN4.577e-1531.16GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_RHIME2.967e-1427.876-phosphogluconolactonase OS=Rhizobium meliloti GN... [more]
6PGL_TREPA9.544e-1327.916-phosphogluconolactonase OS=Treponema pallidum GN... [more]
6PGL_CHLMU1.246e-1227.596-phosphogluconolactonase OS=Chlamydia muridarum G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YB09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260301 ID=DY260301; Name=DY260301; organism=Citrus clementina; type=EST; length=1227bp
TTTCCAAACATTTCCCTTAATCGGAACAAATCATCGGACTGCGTGAGAAT
CAAGGCATCATCATCATCATCATCAATGGCTGCCGAGAATAAGAACAAGA
ACAAGAACGTACAGGTTTTTGACTCAGAGGAAGATCTGGCTGTGTCTTTG
GCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTC
CTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCCTCAGGAAAT
TAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGGCATGTG
TTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTA
TAAGCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCACTGGCA
ATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGAT
TATGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATC
TGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTC
CAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAG
AATGAAAAATGGGTTACTTTCATTAAAGACTCGCCCAAGCCACCTCCCGA
GAGAATCACTTTCACCTTCCCCGTAATCCACTCATCTGCATATATTGCAA
TGGTGGTGTGTGGTGCCGGAAAATCAAGTGCCGTTCCAACTGCCTTGGGT
AATAATCAAAACTCCTGATTGCCGCCAGTTCCAAGGGCACCCGCCGAAAA
AAAAATTTCCTGGTTTCCCTGACAAACCCCCACTTCCAAGCCTTAAAAAT
CCGGAACATTAACCTGTGCCGCGAACCCCTGTTACCCGCCCAGAAAAATG
GGTTTAACCCGCCGCGGTTTAACACCCCACAACGCTGGGATTTTGTTCCA
CATGAAAAAAAAAACTTCACCCTTGTAACGCCCCTCCAAAAACCTCCGAA
AAAACACATCCCTCTTGATCTCTTTAAAACAAAACAACAACAAGAAACCC
CCCCCTCTCTCTCGTCCTCACGCCTTGGCCGCTCATAACAAAATACACCT
CCGTTCCATCACCTTTCCTTTCGCCACGCAACACGCGGCTCCCCACACCC
ATAGCCCACATAAAAACACCCTCCCACTACCACTCCGCCCCACCCCCCCC
CCCCCGGCTCTCCCCCCCCTCAGCCTC
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