DY260307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260307 vs. ExPASy Swiss-Prot
Match: CYSM_MYCBO (Cysteine synthase B OS=Mycobacterium bovis GN=cysM PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.531e-24 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 135 ELIGHTPMVYLNNVV-------DGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGPFENPANPEIPYETTGPKIWND 608 + +G+TP+V L + DG R+ AKLE P S+KDR A MI+ AE GL+ PG T+L E TSGNTGI LA A +GY+LI +MP S+ERR +L GA++ + G V +E+ P+ +L + NPAN + Y TGP++ D Sbjct: 9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLAD 172 HSP 2 Score: 25.7942 bits (55), Expect = 1.531e-24 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 601 GTTPE-----GRLMLFIAGIGTRGTVTGAG 675 GT PE + F+AG+GT GT+ G G Sbjct: 164 GTGPELLADLPEITHFVAGLGTTGTLMGTG 193
BLAST of DY260307 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.998e-22 Identity = 72/199 (36.18%), Postives = 104/199 (52.26%), Query Frame = 3 Query: 135 ELIGHTPMVYLNNVVDGCV---ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGPFENPANPEIPYETTGPKIWNDSGGKVDAFYSR-DRNPWYCNWCRGDSLKKRTPNIKVYG 719 + IG TP+ N D + + I AKLE + P SVKDR+ +I + G IT KT +IE T+GNTGI LA +A K I ++P +S E++ I+RALGA V + G G +KK +E+ P+ Y+ FENP NP Y T P+I + G + +F + + R LK+R P I++ G Sbjct: 9 DAIGRTPVFKFTNK-DYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTAR--YLKERIPAIRLIG 203
BLAST of DY260307 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.998e-22 Identity = 66/175 (37.71%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 198 IAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGPFENPANPEIPYETTGPKIWNDSGGKVDAFYSR-DRNPWYCNWCRGDSLKKRTPNIKVYG 719 I AKLE + P SVKDR+ +IK+A IT T +IE T+GNTGI LA +A K I ++P +S E++ I+RALGA V + G G +KK +E+ P+ Y+ FENP NP Y T P+I + G + +F + + + LK+R PNI++ G Sbjct: 31 IYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAK--YLKERIPNIRLIG 202
BLAST of DY260307 vs. ExPASy Swiss-Prot
Match: CYSK_DICDI (Cysteine synthase OS=Dictyostelium discoideum GN=cysK PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.375e-19 Identity = 62/202 (30.69%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 117 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEG---FVKKGEEILNRTPNGYILGPFENPANPEIPYETTGPKIWNDSGGKVDAF---------------YSRDRNPWYCNW 668 I + E +G+TP++ + ++ + I K E M P S KDR+A +I D E KGL+ G T+ +E T+G+TGI L + SRGY + + +P S E+ +L LGAE + P VG F+ + + F+N +N Y T +IW + G VD F Y ++ NP NW Sbjct: 38 ISNGIIETVGNTPLIRIKSLSEATGCEIYGKAEFMNPGGSPKDRVAREIILDGEKKGLLKKGSTI-VEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAETKIV-PIVGMNNANHFMHCAYQRCLGDDMAFYANQFDNLSNFNAHYNGTAKEIWEQTKGDVDGFVAAAGTGGTVAGISSYLKEVNPNIQNW 237
BLAST of DY260307 vs. ExPASy Swiss-Prot
Match: Y4XP_RHISN (Putative cysteine synthase OS=Rhizobium sp. (strain NGR234) GN=NGR_a00730 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.544e-13 Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 129 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY-----LADPAVGFEGFVKKGEEILNRTPNGYILGPFENPANPE 569 VT+LIG TP++ ++ V G A + K+E P S+KDR+A SM+ A G + PG T+ +E +SGNTG GLA A G + I ++ + ++ ++RALGAE+ + V + ++ + P + +NPANPE Sbjct: 6 VTQLIGQTPVMSID--VPGRNATLVLKIEKNNPGGSMKDRMARSMVIAALQDGRLPPGGTI-VESSSGNTGTGLALAALEFGLRFIAVVDHHAAPDKIRMMRALGAEIRYVEGDFREDEVAVVERQRLAAQLGAQLPGALFMNQSDNPANPE 154 The following BLAST results are available for this feature:
BLAST of DY260307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260307 ID=DY260307; Name=DY260307; organism=Citrus clementina; type=EST; length=1247bpback to top |