DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.490e-55 Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQ-SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LP RIIKETQRLL+EP PGI A P E N RYF+V+I G ++ SP+EGG FK EL L EEYPMAAPKVRF+TKIYHPN+DKL RI LDILKDKWSPALQIRTVLLSIQALL+APNP Sbjct: 2 AELPHRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNP 118 HSP 2 Score: 55.4546 bits (132), Expect = 5.490e-55 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WKTNEAQA+ETA+ WTRLYA Sbjct: 118 PDDPLANDVVEQWKTNEAQAIETARAWTRLYA 149
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.444e-52 Identity = 86/116 (74.14%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 ++LP+RIIKET++L+S+P PGI+A P +DN+RYF V I GP QSPYE G+F+LEL+LP++YPM APKVRFLTKIYHPNID+LGRICLD+LK WSPALQIRTVLLSIQALL++PNP Sbjct: 2 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNP 117 HSP 2 Score: 38.5058 bits (88), Expect = 2.444e-52 Identity = 15/32 (46.88%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 P+DPL+ ++ + W NE A A+EWT+LYA Sbjct: 117 PNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.912e-50 Identity = 82/114 (71.93%), Postives = 93/114 (81.58%), Query Frame = 1 Query: 64 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 LP+RIIKE + L +P PGI A+P+EDN+RYF + + GP QS YEGG F LELFLP+EYPM P VRFLTKIYHPN+DKLGRICL LK WSPALQIRTVLLSIQAL+ APNP Sbjct: 3 LPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNP 116 HSP 2 Score: 46.595 bits (109), Expect = 4.912e-50 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL ++ K WK NE QA+ A+EWT+ YA Sbjct: 116 PDDPLDNDVAKIWKENEPQAIANAREWTKKYA 147
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.149e-32 Identity = 64/115 (55.65%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 73 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL----KDKWSPALQIRTVLLSIQALLSAPNP 405 R+ +E Q L EP PG+ +E NM I+G + SPYEGG+F LE+ +PE YP PK+RFLT IYHPNID GRICLDIL K W PAL I TVL SIQ L+S PNP Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNP 120 HSP 2 Score: 31.9574 bits (71), Expect = 4.149e-32 Identity = 14/32 (43.75%), Postives = 18/32 (56.25%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL +I +K N A AK+WT +A Sbjct: 120 PDDPLMADISSEFKYNRAVFFSNAKKWTEKHA 151
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.460e-32 Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI KE L +P SA P D++ ++ I+GP+ SPY GGVF L + P +YP PKV F TKIYHPNI+ G ICLDILKD+WSPAL + VLLSI +LL+ NP Sbjct: 5 KRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANP 116 HSP 2 Score: 38.5058 bits (88), Expect = 5.460e-32 Identity = 17/32 (53.12%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL I + +KT++A+ TAKEWT+ YA Sbjct: 116 PDDPLVPEIAQIYKTDKAKYEATAKEWTKKYA 147
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.111e-32 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI+KE + L +P SA P ++M ++ I+GPT SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNP Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 HSP 2 Score: 36.1946 bits (82), Expect = 7.111e-32 Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASG 505 PDDPL I +KT+ A+ TA+ WT+ YA G Sbjct: 115 PDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.206e-31 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI+KE + L +P SA P ++M ++ I+GP +SPY GGVF + + P +YP PKV F TK+YHPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNP Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 HSP 2 Score: 35.4242 bits (80), Expect = 1.206e-31 Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASG 505 PDDPL I +KT+ ++ TA+ WT+ YA G Sbjct: 115 PDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.571e-31 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI+KE + L +P SA P ++M ++ I+GP +SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNP Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 HSP 2 Score: 36.1946 bits (82), Expect = 1.571e-31 Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASG 505 PDDPL I +KT+ A+ TA+ WT+ YA G Sbjct: 115 PDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.045e-31 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI+KE + L +P SA P ++M ++ I+GP+ SPY GGVF + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNP Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 HSP 2 Score: 36.5798 bits (83), Expect = 2.045e-31 Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASG 505 PDDPL I +KT+ A+ TA+ WT+ YA G Sbjct: 115 PDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.518e-31 Identity = 57/112 (50.89%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI+KE + L +P SA P ++M ++ I+GP++SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNP Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 HSP 2 Score: 34.6538 bits (78), Expect = 4.518e-31 Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASG 505 PDDPL I +KT++ + TA+ WT+ YA G Sbjct: 115 PDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |