DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.984e-12 Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFL-TKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLS 393 S +R+ KE L + P P IS + DN+ + + + G S Y+G FKL+ YP+ +P+V F+ T HP+I G ICL IL D WSPAL + +V LSI ++LS Sbjct: 3 SRYAKRLQKELLDLKTNPPPCISITEG-DNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLS 114
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC4_MIMIV (Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R795 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.984e-12 Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 10 NP*VKKQKKSILEMA-------NSNLPRRIIK---ETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 NP K K+I M N+ L +++I+ E ++ P I +E ++ ++ ++ GP +PY+ G + + EEYP AP +RF+T I H NI+ GR+C IL ++P ++I +L I LL P+ Sbjct: 1106 NPTKKLHAKAISPMEIISKTNENTKLSQKLIRVQREIVDVMKNQHPDIDVYINEQDISFWKIVFKGPDSTPYKNGTWLAYIQFTEEYPNIAPNIRFVTPIKHCNINNYGRVCHSILDRNYTPNVKISLILQCIYGLLLNPD 1246
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.897e-12 Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 1 Query: 166 MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +I+ P + Y G F + YP PKV+ T++YHPNID G +CL+IL++ W+P L I +++ +Q L PNP Sbjct: 59 LIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNP 138
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.090e-12 Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 73 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 R+ K+ L + IS ++++ F V I P + Y G F + YP APKV+ TK+YHPNID G +CL+IL++ W P L I TV+ + L + PN Sbjct: 35 RLHKDISELNLPKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPN 143
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.648e-12 Identity = 31/100 (31.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 139 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL------------DILKDKWSPALQIRTVLLSIQALLSAPN 402 + N+ + V I+GP ++ Y+GG F + P+ YP + P VRF ++++HPN+ GR+C+ ++ ++W+P + +++LSI ++LS+PN Sbjct: 34 DSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPN 133
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.648e-12 Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 166 MILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +I+ P + Y G L E YP+ PKV L KI+HPNID G +CL+IL++ WSPAL +++++ + L PNP Sbjct: 66 VIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNP 145
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 73 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 396 R+ KE P G + DN++ + + + G + Y ++L++ PE YPM AP+V F++ HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 19 RLQKELSEWQLNPPTGFRHKVT-DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSS 126
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 37/115 (32.17%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 70 RRIIKETQRLLSE-PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK------WSPALQIRTVLLSIQALLS 393 R ++KE L + P P + + YF++ + P +S Y+GG F+ E+ +P+ Y M PKV+ LT+I+HPNI + G ICL +L++ W+P ++ V+ + +L + Sbjct: 35 RLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTV-SPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFT 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 37/115 (32.17%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 70 RRIIKETQRLLSE-PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK------WSPALQIRTVLLSIQALLS 393 R ++KE L + P P + + YF++ + P +S Y+GG F+ E+ +P+ Y M PKV+ LT+I+HPNI + G ICL +L++ W+P ++ V+ + +L + Sbjct: 35 RLLVKEVAELEANLPCTCKVNFPDPNKLHYFHLTV-SPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFT 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 38/119 (31.93%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNP 405 +R+ +E ++ + G A P + +++ + I G + + GGV+ + + P EYP PKV+F YHPN+ G ICL IL + W PA+ ++ ++L +Q LL +PNP Sbjct: 7 QRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNP 125 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |