DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 38/123 (30.89%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 31 KKSILEMANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 396 +K++ ++A + L + +++ P G + DN++ + + ++G + Y ++L++ PE YPM +P+V FL HP+I G ICLDIL D WSPA+ + ++ +SI ++LS+ Sbjct: 9 RKTLSKIATNRLQKELVEWQMN----PPTGFKHKVT-DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSS 126
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.934e-11 Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 49 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK--IYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSA 396 MA +R+ KE + ++ P P I A P+EDN+ ++ +I GP +PY+GG + L P +YP P +R +T + PN R+CL D D W+P + T+L + + +++ Sbjct: 1 MATKQAHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNT----RLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTS 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.526e-11 Identity = 37/118 (31.36%), Postives = 63/118 (53.39%), Query Frame = 1 Query: 49 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLS 393 MA+ +R+ KE + + P P I A+P EDN+ ++ +I GP ++PYE G + L P +YP P +R LT + + R+CL D D W+P+ + T+L + + ++ Sbjct: 1 MASRQAYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMT 116
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.526e-11 Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 139 EDNMRYFN----VMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL------------KDKWSPALQIRTVLLSIQALLSAPN 402 ED+ F VM+L S Y GG FK ++ PE++P + P+ RF IYHPN+ + GR+C+ IL + WSP + +VL+SI +LL PN Sbjct: 34 EDDSNIFTWNIGVMVLNE-DSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPN 136
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.299e-11 Identity = 31/93 (33.33%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 133 PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK------WSPALQIRTVLLSIQALLS 393 P + + YF + ++ P + Y+GG F+ E+ +P+ Y M PKV+ LT+I+HPNI + G ICL +L++ W+P ++ V+ + +L + Sbjct: 57 PDPNKLHYFQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFT 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.309e-11 Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 70 RRIIKETQRLLSE-PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK------WSPALQIRTVLLSIQALLS 393 R +IKE L + P+ P E+ + +F + I P + Y GG F+ E+ +PE Y M PKV+ LT+I+HPNI + G ICL +L++ W+P ++ V+ + +L + Sbjct: 35 RLLIKEVAELEANLPSTCKVTFPDENKLCHFQLAI-SPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFT 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.309e-11 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 73 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 396 R+ KE + P G S DN++ + + + G + Y ++L++ PE YPM AP+V F HP+I G ICLD+L D WSPA+++ ++ LSI ++LS+ Sbjct: 19 RLQKEFMEWQTNPPSGFKHRVS-DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSS 126
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.600e-11 Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 49 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLS 393 MA+ +R+ KE + +++ P P I A+P EDN+ ++ +I GP +PYE G + L P +YP P +R +T + + R+CL D + W+PA + T+L + + ++ Sbjct: 1 MASIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.600e-11 Identity = 35/118 (29.66%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 49 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLS 393 MA +R+ KE + ++ P P I A P+E+N+ ++ +I GP +PY+GG + L P +YP P +R +T + + R+CL D D W+P + T+L + + ++ Sbjct: 1 MATKQAQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.600e-11 Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 73 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSA 396 R+ KE P G + DN++ + + + G + Y + L++ P+ YPM AP+V F+ HP+I G ICLDIL D WSPA+ + +V +SI ++LS+ Sbjct: 19 RLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 126 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |