DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 8.089e-26 Identity = 50/112 (44.64%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 RR++++ +R+ + PG+SASP DN+ +N MI+GP +PYE G F+L L E+YP P V+FL++++HPN+ G ICLDIL+++W+P + ++L SIQ+L + PNP Sbjct: 7 RRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.324e-26 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI+KE Q + +PA I+ SE ++ + LGP +PYEGG F +++ +P EYP PK++F TK+YHPNI + G ICLDILK+ WSP + +++ L+S+QALL +P P Sbjct: 5 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEP 118 HSP 2 Score: 31.187 bits (69), Expect = 8.324e-26 Identity = 13/33 (39.39%), Postives = 19/33 (57.58%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYAS 502 P+DP + +H+ + +TA WTRLYAS Sbjct: 118 PNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.056e-25 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 RR++++ ++L +P G+S +P+EDN+ + +I GP ++P+E G FKL L EEYP P V+F++K++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.087e-25 Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 73 RIIKETQRL-LSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI-DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPR 408 RI KE Q ++ + GI P DN+ I GP +PYEGG F++++ +P+ YP PK++F TK++HPNI + G ICLDILKD+WSPAL ++T L+SIQALLSAP P+ Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPK 119 HSP 2 Score: 23.8682 bits (50), Expect = 1.087e-25 Identity = 10/32 (31.25%), Postives = 15/32 (46.88%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 P DP + + + N V TA+ WT +A Sbjct: 118 PKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.802e-25 Identity = 51/112 (45.54%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +R+I++ +RL ++P GIS +P DN+ +N +I GP +P+E G FKL L E YP P V+FL+K++HPN+ G +CLDIL+++WSP + +L SIQ+LL PNP Sbjct: 7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.384e-25 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +RI KE + +P P SA P DN+ + ILGP S YEGGVF L++ EYP PKV F T+IYH NI+ G ICLDILKD WSPAL I VLLSI +LL+ NP Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNP 200 HSP 2 Score: 24.6386 bits (52), Expect = 2.384e-25 Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYAS 502 P DPL +I + N + A+ WT+ YA+ Sbjct: 200 PADPLVGSIATQYLQNREEHDRIARLWTKRYAT 232
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.074e-25 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 RR+I++ +RL S+ GIS SP+ DN+ +N +I GP ++P+E G F+L L + YP P VRF++K++HPNI G +CLDIL+++WSP + +L S+Q+LL+ PNP Sbjct: 7 RRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.014e-25 Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 RR++++ +RL S+P GIS +P E+N+ + +I GP S +EG FKL L EEYP AP V+FL+K++HPN+ G ICLDIL+++WSP I +L SIQ+LL PNP Sbjct: 7 RRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 5.243e-25 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 5.243e-25 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |