DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 6.848e-25 Identity = 47/111 (42.34%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P V+F+++++HPN+ G +CLDIL+++WSP + VL SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 6.848e-25 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP Sbjct: 7 KRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +R++ + +RL +P GIS +P ++N+ ++N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + VL SIQ+LL PNP Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 +R++++ +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+YP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 47/111 (42.34%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P+V+F+++++HPN+ G +CLDIL+++WSP + VL SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 46/111 (41.44%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ +P G+SASP DN+ +N +I+GP+ +P+E G F+L L E+YP P+V+F+++++HPN+ G +CLDIL+++WSP + ++L S+Q+LL+ PN Sbjct: 7 RRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.525e-24 Identity = 47/111 (42.34%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P+V+F+++++HPN+ G +CLDIL+++WSP + VL SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 1.525e-24 Identity = 48/111 (43.24%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ +P G+SASP DN+ +N +I+GP +P+E G FKL L E+YP P V+F++ ++HPN+ G +CLDIL+++WSP + +L SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.972e-24 Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 49 MANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 MAN + R R KE + I ++N I GP +PYEGG ++LE+ +PE YP PKVRF+TKI+HPNI + G ICLDILKD+W+ A+ +RTVLLS+QALL+A P Sbjct: 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEP 122 HSP 2 Score: 28.1054 bits (61), Expect = 1.972e-24 Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDP + +K N +TA+ W +YA Sbjct: 122 PDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.972e-24 Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 49 MANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 MAN + R R KE + I ++N I GP +PYEGG ++LE+ +PE YP PKVRF+TKI+HPNI + G ICLDILKD+W+ A+ +RTVLLS+QALL+A P Sbjct: 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEP 122 HSP 2 Score: 28.1054 bits (61), Expect = 1.972e-24 Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDP + +K N +TA+ W +YA Sbjct: 122 PDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |