DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.972e-24 Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 49 MANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 MAN + R R KE + I ++N I GP +PYEGG ++LE+ +PE YP PKVRF+TKI+HPNI + G ICLDILKD+W+ A+ +RTVLLS+QALL+A P Sbjct: 1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEP 122 HSP 2 Score: 28.1054 bits (61), Expect = 1.972e-24 Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDP + +K N +TA+ W +YA Sbjct: 122 PDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.992e-24 Identity = 46/111 (41.44%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P V+F+++++HPN+ G +CLDIL+++WSP + +L SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.992e-24 Identity = 46/111 (41.44%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+YP P V+F+++++HPN+ G +CLDIL+++WSP + +L SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.398e-24 Identity = 45/111 (40.54%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ +P G+SASP DN+ +N +I+GP ++P+E G F++ L E+YP P V+F+++++HPN+ G +CLDIL+++WSP + +L S+Q+LL+ PN Sbjct: 7 RRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.640e-24 Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 55 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI-DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + N RRI KE + + GI D++ + M GP +PYEGG F +++ +P +YP PK+ F TKIYHPN+ + G ICLDILKD+WSP +++ L+S+Q+LL P P Sbjct: 2 SDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEP 119 HSP 2 Score: 28.4906 bits (62), Expect = 5.640e-24 Identity = 12/33 (36.36%), Postives = 18/33 (54.55%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYAS 502 P +P + + + N Q V TA+EWT YA+ Sbjct: 119 PSNPQDAQVAQVYLQNYQQFVRTAREWTSSYAA 151
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.360e-24 Identity = 59/122 (48.36%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 49 MANSNLPR--RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 MAN + R R KE R I D+ I GP +PYEGG F LE+ +PE YP PKVRF+T+I+HPNI + G ICLDILKD W+ A+ +RTVLLS+QALL+A P Sbjct: 1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEP 122 HSP 2 Score: 28.1054 bits (61), Expect = 7.360e-24 Identity = 13/34 (38.24%), Postives = 16/34 (47.06%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASG 505 PDDP + +K + TAK WT YA G Sbjct: 122 PDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG 155
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.291e-23 Identity = 46/111 (41.44%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 RR++++ +R+ + G+SASP DN+ +N +I+GP +P+E G F+L L E+YP P V+F+++++HPN+ G +CLDIL+++WSP + ++L SIQ+LL+ PN Sbjct: 7 RRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPN 117
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.203e-23 Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 55 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 402 N + +R+ KE L+ GISA P +N+ + I GP + Y G ++L L P YP AAP V+FLT +HPN+D G ICLDILKDKWS +RT+LLSIQ+LL PN Sbjct: 30 NHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPN 145
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.877e-23 Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 70 RRIIKETQRLLSEPAPGISASPSEDN-MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPR 408 +R+ E +LLS ISA P +DN + Y+ I GP +PY G FK+ L P+ YP P ++FL+ ++HPN+DK G ICLDILK+KWS + T+LLS+Q+LL PN R Sbjct: 11 KRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNR 124
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.877e-23 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 61 NLP----RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 NLP RR+ KE L S+P GI P+E+++ V I GP +PY GG+F+++L L +++P A PK FLTKI+HPN+ G IC+++LK W L IR VLL+I+ LL PNP Sbjct: 7 NLPPHIIRRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNP 125 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |