DY260317

Overview
NameDY260317
Unique NameDY260317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30
Identity = 63/86 (73.26%), Postives = 72/86 (83.72%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA+ V V +KHNDDEQY+WES AGGSFTV +D   E LGRGT+I LHLKED  EYLEERRLKDL+KKHSEF+S+PI L +EKT
Sbjct:  128 AYLVADSVTVVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGRGTRIILHLKEDQGEYLEERRLKDLVKKHSEFISFPIELAVEKT 213          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  130 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 213          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.719e-29
Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKED  EY+EERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYMEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29
Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219          
The following BLAST results are available for this feature:
BLAST of DY260317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HSP90_EIMTE2.653e-3073.26Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HS90A_RAT1.008e-2971.76Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG1.008e-2971.76Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_MOUSE1.008e-2971.76Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_MACFA1.008e-2971.76Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.008e-2971.76Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE1.008e-2971.76Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN1.008e-2971.76Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_CRIGR1.719e-2970.59Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HS90B_RAT2.933e-2970.59Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260317 ID=DY260317; Name=DY260317; organism=Citrus clementina; type=EST; length=684bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCCACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCCTTAGTTACCCCATTTCCCTCTGGATT
GAGAAGACCCCTGAGAAGGAGATTTCTGATGATGAAGACCAGGAAGAAAA
GAAGGATGAGGAGGGTAAAGTTGAAGAAGTTGATGAAAAAAAAGAGAAGG
AAGAAAAGAAAAACAAAAACAACCGGGAGGTGTCCCCTGAGTGGGCCCTT
GGTGAACCACCCCAACCCCCTTTGGGAAGAGAAACCCGAAGAAAATTCCC
AAAAAAAAACTAGGCCCCCCTTCCCCCCAATTCCCGACCCATGACCGGGG
AGGAACCCCCCGGCCCGGTAACCCCCCTCCCCCGTTGAAGCGCCCCCCCT
GGGTTTTAACGGCCCCCCCCCCCTTTCCCCCCCACACAGGCCCCCCTTTT
TGCCCCCCCTGAACCCCCCGGGAAAAAAGCCCCCAACAAATAAACCAGGC
CTCCCCCTCCCCCCCCCGGGTCCCTCCCCCCGGG
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