DY260317

Overview
NameDY260317
Unique NameDY260317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28
Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQYIWES AGGSFTV  D  GE +GRGTK+ LHLKED  EY+EE+R+K+++KKHS+F+ YPI+L+IEK
Sbjct:  138 AYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPDF-GESIGRGTKVILHLKEDQSEYVEEKRIKEVVKKHSQFIGYPITLYIEK 221          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.456e-28
Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV+VT+K+NDDEQY+WES AGGSFTV  D SGE LGRGTKI LH+KED LEYLEE ++K ++ KHS+F+ YPI L +EK
Sbjct:  131 AYLVADKVVVTSKNNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHIKEDQLEYLEESKIKQIVNKHSQFIGYPIKLLVEK 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKED  EY+EE+R+K+++KKHS+F+ YPI+L++EK
Sbjct:  135 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQTEYIEEKRVKEVVKKHSQFIGYPITLYVEK 218          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.435e-28
Identity = 59/86 (68.60%), Postives = 71/86 (82.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA+KV V +K+N D+QY+WES A G FTV RD S E L RGT++ LHLKED  EYLEERRLK+L+KKHSEF+S+PISL +EKT
Sbjct:  134 AYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEKT 219          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA+KV V +K+N D+QY+WES A G FTV +D S E L RGT++ LHLKED  EYLEERRLK+L+KKHSEF+S+PISL +EKT
Sbjct:  134 AYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEKT 219          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV V +KHNDDEQYIWES AGGSFTVT DT G  L RGT+I L +KED L+YLEE+ +KD +KKHSEF+SYPI L + +
Sbjct:  128 AYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTDGPRLLRGTEIRLFMKEDQLQYLEEKTIKDTVKKHSEFISYPIQLVVTR 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 55/85 (64.71%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA++V V +K+NDDEQYIWES AGG+FT+T+DT GE LGRGTKI LHLK++  +YL E R+K++++KHSEF+SYPI L + K
Sbjct:  127 AYLVADRVTVVSKNNDDEQYIWESAAGGTFTLTQDTEGEQLGRGTKIILHLKDEQTDYLNESRIKEVVRKHSEFISYPIYLHVLK 211          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27
Identity = 56/83 (67.47%), Postives = 69/83 (83.13%), Query Frame = 2
Query:    8 LVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            L AEK++V  KHNDDEQY WES AGGSFTV  D  GE +GRGTK+ LHLKED  EYLEERR+K+++KKHS+F+ YPI+L++EK
Sbjct:  117 LQAEKLVVITKHNDDEQYAWESSAGGSFTVHAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 198          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26
Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV VT+K+NDDEQYIWES AGGSFTV  D S E LGRGTKI L++KED  +YLEE ++K+++ KHS+F+ YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L++KED  +YLEE ++K+++ KHS+F+ YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
The following BLAST results are available for this feature:
BLAST of DY260317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
H90A1_DANRE1.114e-2870.59Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP83_ANOGA1.456e-2869.41Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HS90B_DANRE4.235e-2868.24Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_THEAN9.435e-2868.60Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_THEPA2.745e-2767.44Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_SCHPO2.745e-2768.24Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP90_ASPFU2.745e-2764.71Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
H90B3_HUMAN7.987e-2767.47Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP83_DROAV3.035e-2665.88Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_DROSI3.964e-2664.71Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260317 ID=DY260317; Name=DY260317; organism=Citrus clementina; type=EST; length=684bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCCACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCCTTAGTTACCCCATTTCCCTCTGGATT
GAGAAGACCCCTGAGAAGGAGATTTCTGATGATGAAGACCAGGAAGAAAA
GAAGGATGAGGAGGGTAAAGTTGAAGAAGTTGATGAAAAAAAAGAGAAGG
AAGAAAAGAAAAACAAAAACAACCGGGAGGTGTCCCCTGAGTGGGCCCTT
GGTGAACCACCCCAACCCCCTTTGGGAAGAGAAACCCGAAGAAAATTCCC
AAAAAAAAACTAGGCCCCCCTTCCCCCCAATTCCCGACCCATGACCGGGG
AGGAACCCCCCGGCCCGGTAACCCCCCTCCCCCGTTGAAGCGCCCCCCCT
GGGTTTTAACGGCCCCCCCCCCCTTTCCCCCCCACACAGGCCCCCCTTTT
TGCCCCCCCTGAACCCCCCGGGAAAAAAGCCCCCAACAAATAAACCAGGC
CTCCCCCTCCCCCCCCCGGGTCCCTCCCCCCGGG
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