DY260317

Overview
NameDY260317
Unique NameDY260317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L++KED  +YLEE ++K+++ KHS+F+ YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.177e-26
Identity = 54/84 (64.29%), Postives = 68/84 (80.95%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            +LVA+ V V +KHNDDEQY+WES AGG FTVT D + E LGRGT + L LKED LEYLEE+R+K+++KKHSEF++YPI L + K
Sbjct:  131 FLVADHVQVISKHNDDEQYVWESNAGGKFTVTLDETNERLGRGTMLRLFLKEDQLEYLEEKRIKEVVKKHSEFVAYPIQLVVTK 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 54/84 (64.29%), Postives = 69/84 (82.14%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            +LVA++V V +KHNDDEQYIWES AGGSFTVT D   E +GRGT + L LKED LEYLEE+R+K+++K+HSEF++YPI L + K
Sbjct:  129 FLVADRVQVISKHNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKEDQLEYLEEKRIKEVVKRHSEFVAYPIQLLVTK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L +KED  +YLEE ++K+++ KHS+F+ YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLFIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25
Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L++KED  +YLEE ++K+++ KHS+F+ YPI L +EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25
Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L++KED  +YLEE ++K+++ KHS+F+ YPI L +EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISL 244
            AYLVA+ VIV +K+NDDEQY+WES AGG FT+  D + E LGRGTKI LH+KED L+YL+E ++K+L+KKHSEF+ YPISL
Sbjct:  131 AYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHT-EPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFIQYPISL 210          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25
Identity = 51/84 (60.71%), Postives = 68/84 (80.95%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            YLVA+ V V +KHNDD+QY+WES+A GSF ++ DT  E LGRGT+I LHL+++  EYLEE +LKDL+KK+SEF+++PI LW  K
Sbjct:  204 YLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWATK 287          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA++V V +K+NDDE Y WES AGG+FTVT     +L  RGT+I LHLKED  EYLEERRLKDLIKKHSEF+ Y I L +EK
Sbjct:  126 AYLVADRVTVVSKNNDDEAYTWESSAGGTFTVTPTPDCDLK-RGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMVEK 209          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA++V VT+K+N DE Y+WES A G+FT+T     ++  RGT+ITLHLKED +EYLE RRLK+LIKKHSEF+ Y I L +EKT
Sbjct:  126 AYLVADRVTVTSKNNSDESYVWESSACGTFTITSTPESDMK-RGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKT 210          
The following BLAST results are available for this feature:
BLAST of DY260317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HSP83_DROME3.964e-2664.71Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP90_CANAL5.177e-2664.29Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP82_ASHGO6.761e-2664.29Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP83_DROVI8.831e-2664.71Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HSP83_DROPS1.153e-2562.35Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROMI1.506e-2562.35Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HSC90_DICDI3.356e-2566.67Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
ENPL_HORVU9.763e-2560.71Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP85_TRYCR1.275e-2467.06Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_LEIIN1.275e-2462.79Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260317 ID=DY260317; Name=DY260317; organism=Citrus clementina; type=EST; length=684bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCCACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCCTTAGTTACCCCATTTCCCTCTGGATT
GAGAAGACCCCTGAGAAGGAGATTTCTGATGATGAAGACCAGGAAGAAAA
GAAGGATGAGGAGGGTAAAGTTGAAGAAGTTGATGAAAAAAAAGAGAAGG
AAGAAAAGAAAAACAAAAACAACCGGGAGGTGTCCCCTGAGTGGGCCCTT
GGTGAACCACCCCAACCCCCTTTGGGAAGAGAAACCCGAAGAAAATTCCC
AAAAAAAAACTAGGCCCCCCTTCCCCCCAATTCCCGACCCATGACCGGGG
AGGAACCCCCCGGCCCGGTAACCCCCCTCCCCCGTTGAAGCGCCCCCCCT
GGGTTTTAACGGCCCCCCCCCCCTTTCCCCCCCACACAGGCCCCCCTTTT
TGCCCCCCCTGAACCCCCCGGGAAAAAAGCCCCCAACAAATAAACCAGGC
CTCCCCCTCCCCCCCCCGGGTCCCTCCCCCCGGG
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