DY260317

Overview
NameDY260317
Unique NameDY260317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.665e-24
Identity = 53/84 (63.10%), Postives = 68/84 (80.95%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            +LVA++V V +K NDDEQYIWES AGGSFTVT D   E +GRGT + L LK+D LEYLEE+R+K++IK+HSEF++YPI L + K
Sbjct:  128 FLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTK 211          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 112.849 bits (281), Expect = 1.665e-24
Identity = 52/84 (61.90%), Postives = 69/84 (82.14%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            +LVA++V V +K+N+DEQYIWES AGGSFTVT D   E +GRGT + L LK+D LEYLEE+R+K++IK+HSEF++YPI L + K
Sbjct:  128 FLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLLVTK 211          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.665e-24
Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+ + V +KHNDD QY+WES+A G F V+ DT  E LGRGT+I LHL+++  EYLEE +LK+L+K++SEF+++PISLW  K
Sbjct:  202 AYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASK 286          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA++V V +K+NDDEQYIWES AGG+F ++ D +G  +GRGTKI LHLK++  +YL E ++K++IKKHSEF+SYPI L ++K
Sbjct:  126 AYLVADRVTVVSKNNDDEQYIWESSAGGTFNISPD-NGPSIGRGTKIILHLKDEQTDYLNESKIKEVIKKHSEFISYPIYLHVQK 209          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.846e-24
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S E LGRGTKI L++KED  +YLEE ++K+++ KHS+F+ YP     EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPXKXXXEK 212          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.846e-24
Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            AYLVA+KV V +K NDDEQYIWES AGG+F VT+D  G  +GRGTK+ LHLK++  EYL E ++K+++KK SEF+ YPI L + K
Sbjct:  127 AYLVADKVTVISKSNDDEQYIWESNAGGTFKVTQDDDGRAIGRGTKMILHLKDEQTEYLNESKIKEVVKKQSEFIFYPIYLHVLK 211          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA++V V +K+N+D+ Y WES AGG+FTVT     +L  RGT+I LHLKED  EYLEERRLKDLIKKHSEF+ Y I L +E T
Sbjct:  126 AYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCDLK-RGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMVENT 210          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.265e-24
Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            A+LVA+KV+V +KHNDD+ Y WES AGGSF + +    EL  RGTKITL++KED  +YLEERR+K+++KKHS+F+ YPI L +EK
Sbjct:  131 AFLVADKVVVASKHNDDDCYQWESSAGGSFIIRQVNDPELT-RGTKITLYIKEDQTDYLEERRIKEIVKKHSQFIGYPIKLTVEK 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.141e-23
Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA++V VT+K+N DE Y+WES AGG+FT+T     ++     +ITLHLKED LEYLE RRLK+LIKKHSEF+ Y I L +EKT
Sbjct:  126 AYLVADRVTVTSKNNSDEVYVWESSAGGTFTITSAPESDMK-LPARITLHLKEDQLEYLEARRLKELIKKHSEFIGYDIELMVEKT 210          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 49/85 (57.65%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEK 256
            A+LVA+KV+VT+K+NDD+ Y WES AGGSF V      EL  RGTKIT+++KED +++LEER++K+++KKHS+F+ YPI L +EK
Sbjct:  129 AFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPYNDPELT-RGTKITMYIKEDQVDFLEERKIKEIVKKHSQFIGYPIKLVVEK 212          
The following BLAST results are available for this feature:
BLAST of DY260317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HSP82_YEAST1.665e-2463.10ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST1.665e-2461.90ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
ENPL_ARATH1.665e-2458.82Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HSP90_PODAN3.710e-2460.00Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_DROPB4.846e-2460.00Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSP82_AJECA4.846e-2460.00Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP83_TRYBB6.328e-2463.95Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_BRUPA8.265e-2460.00Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_LEIAM3.141e-2361.63Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP90_CAEBR6.997e-2357.65Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260317 ID=DY260317; Name=DY260317; organism=Citrus clementina; type=EST; length=684bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCCACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCCTTAGTTACCCCATTTCCCTCTGGATT
GAGAAGACCCCTGAGAAGGAGATTTCTGATGATGAAGACCAGGAAGAAAA
GAAGGATGAGGAGGGTAAAGTTGAAGAAGTTGATGAAAAAAAAGAGAAGG
AAGAAAAGAAAAACAAAAACAACCGGGAGGTGTCCCCTGAGTGGGCCCTT
GGTGAACCACCCCAACCCCCTTTGGGAAGAGAAACCCGAAGAAAATTCCC
AAAAAAAAACTAGGCCCCCCTTCCCCCCAATTCCCGACCCATGACCGGGG
AGGAACCCCCCGGCCCGGTAACCCCCCTCCCCCGTTGAAGCGCCCCCCCT
GGGTTTTAACGGCCCCCCCCCCCTTTCCCCCCCACACAGGCCCCCCTTTT
TGCCCCCCCTGAACCCCCCGGGAAAAAAGCCCCCAACAAATAAACCAGGC
CTCCCCCTCCCCCCCCCGGGTCCCTCCCCCCGGG
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