DY260317

Overview
NameDY260317
Unique NameDY260317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            A+LVA+KVIVT+KHN+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L+KK+S+F+++PI +W  KT
Sbjct:  202 AFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKT 286          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            A+LVA+KVIVT+KHN+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L+KK+S+F+++PI +W  KT
Sbjct:  202 AFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKT 286          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            A+LVA+KVIVT+KHN+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L++K+S+F+++PI +W  KT
Sbjct:  202 AFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQFINFPIYVWSSKT 286          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            A+LVA+KVIVT+KHN+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L++K+S+F+++PI +W  KT
Sbjct:  202 AFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQFINFPIYVWSSKT 286          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.751e-19
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            A+LVA++VIVT+KHN+D Q+IWES +   F+V  D  G  LGRGT ITL LKE+  +YLE   +K+L+KK+S+F+++PI +W  KT
Sbjct:  201 AFLVADRVIVTSKHNNDTQHIWESDSN-EFSVIDDPRGNTLGRGTTITLVLKEEASDYLELDTVKNLVKKYSQFINFPIYVWSSKT 285          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    2 AYLVAEKVIV---TAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKTP 262
            A++VA+KV V    A H  DE  +WES+  GSFTV   T      RGT+ITLHL+++  E+ ++ RL+ +I K+S+ +S P+ +W E TP
Sbjct:  130 AFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTP 216          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    2 AYLVAEKVIV---TAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKTP 262
            A++VA+KV V    A H  DE  +WES+  GSFTV   T      RGT+ITLHL+++  E+ ++ RL+ +I K+S+ +S P+ +W E TP
Sbjct:  130 AFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETITKAS---RGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTP 216          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    2 AYLVAEKVIV---TAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKTP 262
            A++VA+KV V    A H  +E  +WES+  GSFTV   T      RGT+ITLHL+++  E+ +E RL+ +I K+S+ +S P+ +W E TP
Sbjct:  130 AFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVDTITKAS---RGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMWQEGTP 216          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    2 AYLVAEKVIV---TAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKTP 262
            A++VA+KV V    A H  +E  +WES+  GSFTV   T      RGT+ITLHL+++  E+ +E RL+ +I K+S+ +S P+ +W E TP
Sbjct:  130 AFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVDTITKAS---RGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMWQEGTP 216          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    2 AYLVAEKVIV---TAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKTP 262
            A++VA+KV V    A H  +E  +WES+  GSFTV   T      RGT+ITLHL+++  E+ +E RL+ +I K+S+ +S P+ +W E TP
Sbjct:  130 AFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVDTITKAS---RGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMWQEGTP 216          
The following BLAST results are available for this feature:
BLAST of DY260317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ENPL_CANFA7.241e-2054.65Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_BOVIN7.241e-2054.65Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_RAT1.613e-1953.49Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_MOUSE1.613e-1953.49Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_CHICK2.751e-1953.49Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
HTPG_SHESW1.323e-1343.33Chaperone protein htpG OS=Shewanella sp. (strain W... [more]
HTPG_SHEPC1.323e-1343.33Chaperone protein htpG OS=Shewanella putrefaciens ... [more]
HTPG_SHESR2.256e-1343.33Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESM2.256e-1343.33Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESA2.256e-1343.33Chaperone protein htpG OS=Shewanella sp. (strain A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260317 ID=DY260317; Name=DY260317; organism=Citrus clementina; type=EST; length=684bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCCACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCCTTAGTTACCCCATTTCCCTCTGGATT
GAGAAGACCCCTGAGAAGGAGATTTCTGATGATGAAGACCAGGAAGAAAA
GAAGGATGAGGAGGGTAAAGTTGAAGAAGTTGATGAAAAAAAAGAGAAGG
AAGAAAAGAAAAACAAAAACAACCGGGAGGTGTCCCCTGAGTGGGCCCTT
GGTGAACCACCCCAACCCCCTTTGGGAAGAGAAACCCGAAGAAAATTCCC
AAAAAAAAACTAGGCCCCCCTTCCCCCCAATTCCCGACCCATGACCGGGG
AGGAACCCCCCGGCCCGGTAACCCCCCTCCCCCGTTGAAGCGCCCCCCCT
GGGTTTTAACGGCCCCCCCCCCCTTTCCCCCCCACACAGGCCCCCCTTTT
TGCCCCCCCTGAACCCCCCGGGAAAAAAGCCCCCAACAAATAAACCAGGC
CTCCCCCTCCCCCCCCCGGGTCCCTCCCCCCGGG
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