DY260319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.139e-85 Identity = 147/228 (64.47%), Postives = 189/228 (82.89%), Query Frame = 2 Query: 89 DKKDK-KFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKP---QEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +KKD+ K++P PP + G+K +K++G E + +LP +TP SKCKL+ LKLERIKDYLLME+EF+ N + +P + K + D +++LRG P++VGNLEE+ID+NHAIVSS+VGPE+YV I+SFVDK +L G +L++NK LSVVG++ EVDPMV+VMKVEKAP ESY+DIGGL+AQ+QE+KE +ELPLTHPELYE+IGIKPPKGVILYGEPGTGKTLL KAVAN Sbjct: 14 EKKDQPKYQPPPPPTQFGKK-KKRRGAETSTKLPVITPHSKCKLKQLKLERIKDYLLMEQEFLQNYDLNQPKVDENSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240 HSP 2 Score: 38.5058 bits (88), Expect = 1.139e-85 Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VAD+ P Sbjct: 254 LIQKYLGDGPKLVRELFRVADECAP 278
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 302.753 bits (774), Expect = 2.119e-84 Identity = 146/231 (63.20%), Postives = 193/231 (83.55%), Query Frame = 2 Query: 89 DKKDKK-------FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 DKK KK +EP ++ GRK+RK GP A +LP + P ++CKL+LL++ERIKD+LL+EEEFV+N E LKP E+K EE++ +++++RG+P+S+G LEE+ID++HAIV+S P+YYV ILSFVDK+ LEPGC++L+H+K +S+VG+LQD+ DPMVSVMK++K+P ESY+DIGGL++QIQEIKE VELPLTHPELYE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 10 DKKKKKGSNQKPKYEPPVQ-SKFGRKKRKG-GPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238 HSP 2 Score: 32.7278 bits (73), Expect = 2.119e-84 Identity = 12/25 (48.00%), Postives = 19/25 (76.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGP+L R+ F+VA ++ P Sbjct: 252 LIQKYLGDGPRLCRQIFKVAGENAP 276
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 3.908e-68 Identity = 124/207 (59.90%), Postives = 162/207 (78.26%), Query Frame = 2 Query: 140 RKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 R++R+ K +AA++ P V PL KCKLR LKL+++ L +E+ ++ E K E + + V+ LRGSP+SVG LEE +D++H I+++ VG EYYV I+SFVDKD LEPGC +L++ K SVVG+L+ E+DPMV+VMK+EKAP E+YADIGGL+ QIQEIKE VELPLT+PELY+++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 20 RRRRRVKEGKAASKPPQVYPLMKCKLRYLKLKKLAHLLSLEDNILSLCEPDK-SSEGSNSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVAN 225 HSP 2 Score: 35.039 bits (79), Expect = 3.908e-68 Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LG+GPKL+RE F+VAD P Sbjct: 239 LIQEYLGEGPKLVRELFRVADMHAP 263
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.680e-40 Identity = 81/187 (43.32%), Postives = 125/187 (66.84%), Query Frame = 2 Query: 200 LSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 L K + KL + L E++F+ + ER++ E + RS+V+ LR P+ VG + +++++ +V SS GP++ V ++++++L+PG + ++ + L++V +L DPMV +VE+ P SY DIGGLD QI+EI+E VELPL PEL+ ++GI+PPKGV+LYG PGTGKTLL KAVAN Sbjct: 13 LKKLEEDYYKLRELYRRLEDEKKFIES-ERIR-YEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVAN 197 HSP 2 Score: 28.4906 bits (62), Expect = 1.680e-40 Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 801 ISNFLGDGPKLIREFFQVADDSPP 872 + ++G+G +L+RE FQ+A + P Sbjct: 212 VQKYIGEGARLVREVFQLAKEKAP 235
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.849e-40 Identity = 81/186 (43.55%), Postives = 124/186 (66.67%), Query Frame = 2 Query: 206 KCKLRLLKLERIKDYLLME-EEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 K ++ + + ++ L ME +E +E L+ +E E+ RS + ++ P+ VG +EE++D+ IV SS GP++ + VD+++LEPG + ++ + ++VV +L E D V M+V+++P SY DIGGLD QI+EI+E VE PL PEL+E +G++PPKGV+LYG PGTGKTLL KAVAN Sbjct: 50 KLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVAN 235 HSP 2 Score: 29.261 bits (64), Expect = 2.849e-40 Identity = 9/25 (36.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ F+G+G +L+RE F++A + P Sbjct: 249 LVQKFIGEGARLVRELFELAREKAP 273
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.851e-40 Identity = 78/182 (42.86%), Postives = 122/182 (67.03%), Query Frame = 2 Query: 215 LRLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVA 757 ++L LER +L + E+++ + R L+ + A+E+ ++ + P+ +G E +D+NHAIV S+ G YYV +LS +D++ L+PGC++ +H ++V +L E D + +++ ++ P SY DIGGLD Q QE++E VELPLTH ELY+ IGI PP+GV++YG PG GKT+L KAVA Sbjct: 38 IKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSV---PLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216 HSP 2 Score: 29.261 bits (64), Expect = 2.851e-40 Identity = 8/24 (33.33%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 801 ISNFLGDGPKLIREFFQVADDSPP 872 + +LG+GP+++R+ F++A ++ P Sbjct: 232 VQKYLGEGPRMVRDVFRLAKENSP 255
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.852e-40 Identity = 80/182 (43.96%), Postives = 123/182 (67.58%), Query Frame = 2 Query: 218 RLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 RL LER ++ ++EE+V ++++ LK + +A+E+ ++ + P+ +G E++D+N+ IV S+ G YYV ILS ++++ L+P ++ +H ++V +L E D +S++ + P SY DIGG D Q QEI+E VELPLTH ELY+ IGI PP+GV+LYG PGTGKT+L KAVAN Sbjct: 33 RLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSV---PLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211 HSP 2 Score: 29.261 bits (64), Expect = 2.852e-40 Identity = 8/24 (33.33%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 801 ISNFLGDGPKLIREFFQVADDSPP 872 + +LG+GP+++R+ F++A ++ P Sbjct: 226 VQKYLGEGPRMVRDVFRLAKENAP 249
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.306e-40 Identity = 80/201 (39.80%), Postives = 130/201 (64.68%), Query Frame = 2 Query: 161 GPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 GP+ L + +K K KL+R+ ++L ++EE++ +++R LK + A+E+ ++ + P+ +G E +D+N IV S+ G YYV ILS +D++ L+P ++ +H ++V +L E D +S+++ ++ P Y+DIGG+D Q QEI+E VELPLTH ELY IGI+PP+GV++YG PG GKT+L AVA+ Sbjct: 25 GPQTFDELESEDLYTKYK----KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV---PLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAH 218 HSP 2 Score: 29.261 bits (64), Expect = 6.306e-40 Identity = 8/24 (33.33%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 801 ISNFLGDGPKLIREFFQVADDSPP 872 + +LG+GP+++R+ F++A ++ P Sbjct: 233 VQKYLGEGPRMVRDVFRLAKENSP 256
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.394e-39 Identity = 79/182 (43.41%), Postives = 124/182 (68.13%), Query Frame = 2 Query: 221 LLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVANS 763 L +L+R +Y+ ++EE++ +++R LK + +A+E+ ++ + P+ +G E ID+N IV SS G Y V ILS +D+++L+P ++ +H ++V +L E D ++++ + P +YAD+GGLD Q QEI+E VELPLT +LY+ IGI PP+GV+LYG PGTGKT+L KAVANS Sbjct: 45 LKRLQRHLEYIQLQEEYIKDEQRSLKRELVRAQEEIKRIQSV---PLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANS 223 HSP 2 Score: 28.8758 bits (63), Expect = 1.394e-39 Identity = 8/24 (33.33%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 801 ISNFLGDGPKLIREFFQVADDSPP 872 + +LG+GP+++R+ F++A ++ P Sbjct: 237 VQKYLGEGPRMVRDVFRMARENSP 260
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.816e-39 Identity = 81/183 (44.26%), Postives = 124/183 (67.76%), Query Frame = 2 Query: 218 RLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVANS 763 +L KLE+ + L ++E+++ +++R LK + ++A+E+ ++ + P+ +G E ID+N IVSS+ G Y V ILS +D++ L+P ++ +H ++V +L + D +SVM + P +YAD+GGLD Q QEI+E VELPL +LYE IGI PP+GV+LYG PGTGKT+L KAVANS Sbjct: 50 KLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSV---PLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANS 229 HSP 2 Score: 28.4906 bits (62), Expect = 1.816e-39 Identity = 8/24 (33.33%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 801 ISNFLGDGPKLIREFFQVADDSPP 872 + +LG+GP+++R+ F++A ++ P Sbjct: 243 VHKYLGEGPRMVRDVFRLARENAP 266 The following BLAST results are available for this feature:
BLAST of DY260319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260319 ID=DY260319; Name=DY260319; organism=Citrus clementina; type=EST; length=1206bpback to top |