DY260319

Overview
NameDY260319
Unique NameDY260319
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PEX6_SCHPO (Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe GN=pex6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.651e-11
Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 2 
Query:  503 VLSVVGLLQDEVDPMVSVMKVEKA------PLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVA 757
            +LS   + + +VD  ++ ++ EK+      P  ++ DIGGL+     +++ ++LPL  PEL+   G+KP  GV+LYG PGTGKTLL KAVA
Sbjct:  620 ILSGPIITEQDVDVSINRIRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVA 709
The following BLAST results are available for this feature:
BLAST of DY260319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
PEX6_SCHPO6.651e-1141.76Peroxisomal ATPase pex6 OS=Schizosaccharomyces pom... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260319 ID=DY260319; Name=DY260319; organism=Citrus clementina; type=EST; length=1206bp
CGAAATCTAGTGTGATGCCCTGGGTCAGGGAACACCGGGAGGTCTGAACC
GGCAAGGTCCAGGAGGTGACCGCCAGGGAGATGGAGCGGATAAGAAAGAT
AAAAAATTCGAGCCTGCCGCTCCTCCGGCCCGTGTGGGCCGCAAGCAACG
AAAGCAGAAAGGACCAGAAGCGGCGGCCCGCCTTCCGACCGTTACGCCGC
TGAGTAAGTGCAAGCTGAGGCTTTTAAAGCTTGAGAGGATAAAAGATTAT
CTCTTGATGGAAGAGGAGTTTGTTACGAATCAGGAGAGATTGAAGCCGCA
GGAAGAGAAGGCGGAGGAAGATCGGTCAAAGGTTGACGATCTGAGAGGTT
CGCCGATGAGCGTTGGTAATTTGGAGGAGTTGATTGATGAGAATCACGCC
ATTGTTTCGTCGTCGGTGGGGCCCGAGTATTACGTCGGGATTTTGTCCTT
TGTTGATAAGGATCAGCTGGAGCCTGGCTGTGCTATTTTGATGCACAATA
AGGTCCTTTCGGTGGTTGGGCTTCTGCAAGATGAAGTAGATCCAATGGTG
TCTGTGATGAAGGTTGAGAAGGCTCCCTTGGAGTCTTATGCTGATATTGG
AGGTTTAGATGCCCAGATACAGGAGATTAAAGAACCTGTTGAACTTCCTC
TTACTCATCCCGAACTTTATGAAGATATCGGTATCAAGCCTCCTAAGGGA
GTTATATTGTATGGAGAGCCTGGAACCGGCAAGACACTGCTTTGCAAGGC
TGTGGCAAATTCACCTCCGCCACTTTCCTGCCTGTTGGCCGTAGTGAATT
ATTTCCAACTTCCTGGGTGATGGACCCAAATTAATAAGGGAATTTTTCCA
AGTTGCCGATGATTCGCCCCCCTTCCCCCCCCTCCTGGCTAAAATGAAGC
CATTTGTCCCAAAAGGGATCAACCCCCCCCCGGGGCCCAACTTTAAATCC
CAAAACCCCCTTTCGGGACCCCCTCAACCCCTTTGGATGGTTTTTCATCC
AGAGGAAAAACTACAACCATTTTTTCGCACCACCCCCAAATTACAGCCCC
CGCGCCCCCCCTTTCCTTCCCCCCCGTCGCAATAAAAAAAAAAAAATCGA
AATTCTCTCCCCTCCCCAGAATCCCCACAACAACGAAAAACCCACCCTTT
CCCCCACACCCCCCCCCCCCGCGGCGGAGCACACCCTTCTGCCTCCGAAC
TAGCGT
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