DY260319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.052e-34 Identity = 65/153 (42.48%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 302 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 E + + + +++ ++ P+ +G + +LIDEN IV SS GP + VGI ++ ++++PG ++ + L++V +L D + M+V +AP E Y +IGGL+ QI EI+E VELPL PE++ +GI+PPKGV+L+G PGTGKTLL +AVA+ Sbjct: 57 EREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAH 209 HSP 2 Score: 27.335 bits (59), Expect = 2.052e-34 Identity = 8/25 (32.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ ++G+G +L+RE F++A P Sbjct: 223 LVQKYIGEGARLVRELFELAKKKSP 247
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.281e-34 Identity = 74/175 (42.29%), Postives = 112/175 (64.00%), Query Frame = 2 Query: 236 RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 RI+ L ++ERL E + R+++ LR P G + E++D++ AIV + GP + V I ++++D+L+PG + + + +++V LL E DP V +V + P +Y DIGGL+ Q+ E++E VELPL HPEL+E +GI+PPKGV+LYG PG GKTL+ KAVAN Sbjct: 23 RIRQLELQVRTLEADKERL---ERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVAN 194
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.535e-34 Identity = 68/153 (44.44%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 302 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 E + + +S+++ L+ P+ VG + ++ID +V SS GP + V + V+ L+ G ++ + L++V +L D V M++ AP E+Y DIGGL+ QI EI+E VELP+T P+L+E IGI PPKGV+LYG PGTGKTLL KAVA+ Sbjct: 57 EREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAH 209 HSP 2 Score: 27.7202 bits (60), Expect = 4.535e-34 Identity = 8/25 (32.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ ++G+G +L+RE F +A + P Sbjct: 223 LVQKYIGEGARLVRELFDLAKEKAP 247
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.905e-34 Identity = 72/186 (38.71%), Postives = 119/186 (63.98%), Query Frame = 2 Query: 218 RLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEED----RSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 R+ +LE +L + + +++R L+ Q+ K E + +S++D ++ SP+ +G + ++I + IV SS GP++ V + ++D+ +L PG + ++ L++ ++ +P V+ M+V ++ Y IGGLD QIQE++E VELPL PE + IGI+PPKGV+LYG PGTGKTLL KAVA+ Sbjct: 30 RVRQLESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH 215 HSP 2 Score: 32.3426 bits (72), Expect = 5.905e-34 Identity = 14/55 (25.45%), Postives = 28/55 (50.91%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPPFPPLLAKMKPFVPKGINPPPGPNFKSQNPL 962 ++ ++GDG KL+RE F++A P + ++ + +N G + + Q L Sbjct: 229 LVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTL 283
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 7.687e-34 Identity = 69/153 (45.10%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 302 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 E + + +S+ + LR P+ +G + +++D N IV SS GP + V V+ D ++PG ++ + L++V LL D V M++ +P E Y DIGGL QI E++E VELPL PEL+ IGI+PPKGV+LYG PGTGKTLL KAVA+ Sbjct: 82 EREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAH 234 HSP 2 Score: 26.5646 bits (57), Expect = 7.687e-34 Identity = 8/25 (32.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ ++G+G +L+RE F +A P Sbjct: 248 LVQKYIGEGARLVRELFDLAKKKAP 272
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.691e-34 Identity = 76/196 (38.78%), Postives = 117/196 (59.69%), Query Frame = 2 Query: 191 VTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDR------SKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 ++ SK L +K ++ L EE E+ + +K + +R S++D L+ P+ VG + +++ I+ SS GP++ V F++ ++ PG + ++ + L+V+ +L DP V M+V +P Y IGGL+AQI E+KE VELPL PEL++ +GI+PPKGV+LYG PGTGKTLL KAVAN Sbjct: 20 LSDFSKYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVAN 215 HSP 2 Score: 27.7202 bits (60), Expect = 7.691e-34 Identity = 7/25 (28.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ ++G+G +++RE F++A + P Sbjct: 229 LVQKYIGEGARMVRELFELAKEKSP 253
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.182e-33 Identity = 71/175 (40.57%), Postives = 110/175 (62.86%), Query Frame = 2 Query: 236 RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 RI+ L ++ERL E + RS++ LR P G++ E++D++ AIV + GP + V I ++DK +L PG + + + ++++ +L DP V +V + P +Y DIGGL Q+QE++E +ELPL HPEL+E++GI PPKGV+LYG PG GKTL+ KA+A+ Sbjct: 22 RIRQLELQVRMLEADKERL---ERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAH 193
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.182e-33 Identity = 71/175 (40.57%), Postives = 110/175 (62.86%), Query Frame = 2 Query: 236 RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 RI+ L ++ERL E + RS++ LR P G + E++D++ AIV + GP + V I ++++D+L PG + + + ++++ LL DP V +V + P +Y DIGGL Q+QE++E +ELPL HPEL+E++GI PPKGV+LYG PG GKTL+ KA+A+ Sbjct: 25 RIRQLELQVRMLEADKERL---ERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.054e-32 Identity = 73/175 (41.71%), Postives = 109/175 (62.29%), Query Frame = 2 Query: 236 RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 RI+ L ++ERL E + RS++ LR P G + E++DE+ AIV + GP + V I ++D+ +L PG + + + ++VV +L DP V +V + P +Y DIGGL Q+QE++E +ELPL HPEL+E++GI PPKGV+LYG PG GKTL+ KA+A+ Sbjct: 25 RIRQLELQVRMLEADKERL---ERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.107e-32 Identity = 66/159 (41.51%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 281 QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVA 757 +E++ Q+E E ++++ L P + E+ID+N +V SS GP V + + VD L+PG + ++N+ ++V +L DP+V M+VE+ P + D+GGL+ QI+EI E V LP+ +P L+ ++GI PPKGV+L+G PGTGKTLL KAVA Sbjct: 37 KEKISLQKE-LEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVA 194 HSP 2 Score: 29.261 bits (64), Expect = 3.107e-32 Identity = 9/25 (36.00%), Postives = 19/25 (76.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +++ F+G+G +L+RE F++A + P Sbjct: 209 LVNKFIGEGARLVREIFRLAREKAP 233 The following BLAST results are available for this feature:
BLAST of DY260319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260319 ID=DY260319; Name=DY260319; organism=Citrus clementina; type=EST; length=1206bpback to top |