DY260319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.975e-29 Identity = 64/188 (34.04%), Postives = 105/188 (55.85%), Query Frame = 2 Query: 254 LMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENH--------------------AIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVA 757 +M+ E + L+ +K +E+ K+ + P V N+ EL+D + A++ +S Y++ ++ VD ++L+PG + ++ ++ L E D V M+V++ P E Y+DIGGLD QIQE+ E + LP+ H E +E++GI+PPKGV++YG PGTGKTLL +A A Sbjct: 38 IMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 225 HSP 2 Score: 28.4906 bits (62), Expect = 2.975e-29 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ F+GDG KL+R+ F +A + P Sbjct: 240 LVQMFIGDGAKLVRDAFALAKEKAP 264
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.037e-29 Identity = 63/188 (33.51%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 254 LMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENH--------------------AIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVA 757 +M+ E + L+ ++K +E+ K+ + P V N+ EL+D + A++ +S Y++ ++ VD ++L+PG + ++ ++ L + D V M+V++ P E Y+DIGGLD QIQE+ E + LP+ H E +E++GI+PPKGV++YG PGTGKTLL +A A Sbjct: 57 IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 244 HSP 2 Score: 28.4906 bits (62), Expect = 5.037e-29 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ F+GDG KL+R+ F +A + P Sbjct: 259 LVQMFIGDGAKLVRDAFALAKEKAP 283
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.041e-29 Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 2 Query: 230 LERIKDYLLMEEEFVTNQERLKPQEEKAEED----RSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 L+ + + ++ E N RL+ Q + R ++ L+ VG + +++ +N +V +Y V I +D +L P + + N + +L +VDP+V++MKVEK P +Y IGGLD QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLL +AVA+ Sbjct: 37 LQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217 HSP 2 Score: 25.409 bits (54), Expect = 5.041e-29 Identity = 7/25 (28.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ ++G+G +++RE F +A + P Sbjct: 231 LVQKYIGEGSRMVRELFVMAREHAP 255
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.415e-29 Identity = 67/160 (41.88%), Postives = 102/160 (63.75%), Query Frame = 2 Query: 281 QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +E+LK ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLL +AVA+ Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.415e-29 Identity = 67/160 (41.88%), Postives = 102/160 (63.75%), Query Frame = 2 Query: 281 QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +E+LK ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLL +AVA+ Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.415e-29 Identity = 67/160 (41.88%), Postives = 102/160 (63.75%), Query Frame = 2 Query: 281 QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +E+LK ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLL +AVA+ Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 5.415e-29 Identity = 67/160 (41.88%), Postives = 102/160 (63.75%), Query Frame = 2 Query: 281 QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +E+LK ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK +L+PG + + L+++ L EVDP+V M E SY++IGGL QI+E++E +ELPLT+PEL++ +GI PPKG +LYG PGTGKTLL +AVA+ Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.073e-29 Identity = 67/169 (39.64%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 257 MEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVANS 763 +E T +E L+ +++ + + L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E +ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLL +A+A++ Sbjct: 28 LESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.551e-29 Identity = 67/180 (37.22%), Postives = 107/180 (59.44%), Query Frame = 2 Query: 233 ERIKDYLLMEEEFVTNQERLKPQEE----KAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 ++I+D L + N RL+ Q + R ++ L+ VG + + + +N +V +Y V I +D +++P + + N ++ +L ++VDP+VS+M VEK P +Y +GGL+ QI+EIKE +ELP+ HPEL+E +GI PKG++LYG PGTGKTLL +AVA+ Sbjct: 22 QKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAH 201 HSP 2 Score: 25.409 bits (54), Expect = 8.551e-29 Identity = 7/25 (28.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ ++G+G +++RE F +A + P Sbjct: 215 LVQKYIGEGSRMVRELFVMAREHAP 239
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 8.551e-29 Identity = 68/181 (37.57%), Postives = 108/181 (59.67%), Query Frame = 2 Query: 230 LERIKDYLLMEEEFVTNQERLKPQEE----KAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 + +I++ L+ E N RL+ Q K R ++ L+ VG + + +D+ +V ++ V + VD + + C + + N+ ++ +L ++VDP+VS+M VEK P +Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLL +AVA+ Sbjct: 21 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 201 HSP 2 Score: 26.5646 bits (57), Expect = 8.551e-29 Identity = 8/25 (32.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 ++ F+G+G +++RE F +A + P Sbjct: 215 LVQKFIGEGSRMVRELFVMAREHAP 239 The following BLAST results are available for this feature:
BLAST of DY260319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260319 ID=DY260319; Name=DY260319; organism=Citrus clementina; type=EST; length=1206bpback to top |