DY260330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALX_RAT (Calnexin OS=Rattus norvegicus GN=Canx PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.862e-31 Identity = 104/336 (30.95%), Postives = 149/336 (44.35%), Query Frame = 2 Query: 71 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFLLRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIQDPDPKKPEDWDRQ--------------------------------------EYIPDPENKSPR------------AMMTFPRRYQIP---MPKTLMIGMMKKKVNGPPHPSPTPNYRGPWKPRKI 853 V+F + FD G S W+ S KKD+ T E GKW D P DKG+ + +AISA+ + F K L+ Q+ V + ++CGG Y+KLLS E++ +F TPY+IMFGPD CG K+H I + + +E + TD+ TH+YT +L PD ++ IL+D SG+L +D + P + I+DP+ +KPEDWD + EYIPDP+ + P + P+ P + + MI K P PNY+G WKPRKI Sbjct: 70 VYFADSFDRGSLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTSELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKI 403
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.431e-31 Identity = 104/336 (30.95%), Postives = 148/336 (44.05%), Query Frame = 2 Query: 71 VFFEERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGD-------PNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFLLRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIQDPDPKKPEDWDRQ--------------------------------------EYIPDPENKSPR------------AMMTFPRRYQIP---MPKTLMIGMMKKKVNGPPHPSPTPNYRGPWKPRKI 853 V+F + FD G S W+ S KKD+ T E GKW D P DKG+ + +AISA+ + F K L+ Q+ V + ++CGG Y+KLLS E+ +F TPY+IMFGPD CG K+H I + + +E + TD+ TH+YT +L PD ++ IL+D SG+L +D + P + I+DP+ +KPEDWD + EYIPDP+ + P + P+ P + + MI K P PNY+G WKPRKI Sbjct: 70 VYFADSFDRGSLSGWILSKAKKDD-TDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTAELSLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDEDAPSKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKI 403
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.147e-31 Identity = 85/234 (36.32%), Postives = 119/234 (50.85%), Query Frame = 2 Query: 71 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGE--VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFLLRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIQDPDPKKPEDWDRQEYIPDPENKSP 709 V+F E FD G + WV S KKD+ A G W K N P D+G+ + +AISA + F DK LV Q+ V + +DCGG Y+KLL+ ++ + F T Y+IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD T+ +LID + GSL D + PPK I+DP +KP+DWD + IPD P Sbjct: 56 VYFTETFDSGRLAGWVLSKAKKDDIDAEISIYDGRWEIEELKENRIPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLVVQYEVNFQDGIDCGGAYIKLLADTDGLNLENFYDKTSYTIMFGPDKCG-EDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKRFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGSLLEDVVPPINPPKEIEDPTDEKPDDWDERAKIPDASAVKP 288
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 9.239e-31 Identity = 83/234 (35.47%), Postives = 119/234 (50.85%), Query Frame = 2 Query: 71 VFFEERFDDGWESRWVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCE----------TDQLTHVYTFLLRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIQDPDPKKPEDWDRQEYIPDPENKSP 709 V+F E FD G + WV S KKD+ + G W K N P D+G+ + +AI+A + F DK L+ Q+ V + +DCGG Y+KLL+ G++ + F T Y+IMFGPD CG K+H I + + +E + TD+ TH+YT ++ PD T+ +LID G+L D + PP+ I DP KKPE+WD + IPDP P Sbjct: 60 VYFTETFDSGNLAGWVLSKAKKDDMDSEIAIYDGRWEIEELKENQVPGDRGLVLKSKAKHHAIAAVLEKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCG-EDYKLHLIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEVLIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKP 292
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 5.989e-30 Identity = 85/226 (37.61%), Postives = 120/226 (53.10%), Query Frame = 2 Query: 83 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFP---EFSNKDKTLVFQFSVKHEQKLDCGGGYMKLL----SGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNK------LIKKEVPCETDQLTHVYTFLLRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIQDPDPKKPEDWDRQEYIPDPENKSP 709 E FD+ ++ RWV S+ + + G W + + + +D G+ SE + Y I E + + T+V Q+ + ++ L+CGG Y+K L +G V Q F D+PYSIMFGPD CG +T KVH IL + +K D L+HVYT +L+ D IL+D EK+ G+L S D L+P KTI DP+ KKPEDWD + IPDP P Sbjct: 33 ESFDEPFDGRWVVSEKAEYQ---GVWKHEKSEGH---DDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQG-FDNDSPYSIMFGPDKCG-ATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKP 250
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 8.949e-26 Identity = 93/315 (29.52%), Postives = 137/315 (43.49%), Query Frame = 2 Query: 83 ERFDDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN--------DKGIQTSEDYRFYAISAEFPEFSNK-DKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNG--TNKLIKKEVPCETDQL-----THVYTFLLRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIQDPDPKKPEDW-------------------DRQEYIPDPENKSPRAMMTFPRRYQIPMPKTLMIGMMKKKVNGPPHPSP---------------------TPNYRGPWKPRKI 853 E+F W RW+ S K+ N E +Y G+W + + + G+ ++ +AIS EF E N+ +K LV Q+ V E+ L+CGG Y+KLL+ E + Y IMFGPD CG + + VH I + T + +K + L T++YT +++PD T+ + I+ + GSL+ D+ +LPP I DP+ KP DW D IPDP+ P + Y IP P+ + +G PS PNYRGPW P I Sbjct: 44 EQFQGAWSERWIPSHAKRFVNGIEEMSYV-GEWTVEESSGPGALKGEAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLLA-EPTHGEMSNSIDYRIMFGPDKCGVNDR-VHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIPDPDAVKPEDWLEDEPLY-IPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKPPMIRNPNYRGPWSPPMI 354
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.760e-24 Identity = 79/220 (35.91%), Postives = 105/220 (47.73%), Query Frame = 2 Query: 113 WVTSDWKKDENTA------GEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEF-PEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS--GEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY----NGTNKLIKKEVPCE------TDQLTHVYTFLLRPDATYSILIDNVEKQSGSLYSDWD--LLPPKTIQDPDPKKPEDWDRQEYIPDPENKSP 709 W+ S KKD+ + GEW+ A D G+ R +AI+A+ F+ T V Q+ +K E+ +CGGGY+KLLS E D F T Y+IMFGPD CG +T KVH I Y NGT P D TH++T +++P YS+ +D G++ SD L PPK I D KP DWD +E I D P Sbjct: 75 WIKSLAKKDDVDSDIAKYNGEWSIGAPTKVSIEGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDERENIEDESAVKP 293
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALR_PIG (Calreticulin (Fragment) OS=Sus scrofa GN=CALR PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.530e-17 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 71 VFFEERF--DDGWESRWVTSDWKKDENTAGEWNYTAGKWNGDPN-DKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDC 325 ++F+E+F DGW RW+ S K D G + ++GK+ GD DKG+QTS+D RFYA+SA F FSNK +TLV QF+VKHEQ +DC Sbjct: 21 IYFKEQFLDGDGWTDRWIESKHKPD---FGRFVLSSGKFYGDQEKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDC 105
BLAST of DY260330 vs. ExPASy Swiss-Prot
Match: CALX_YEAST (Calnexin homolog OS=Saccharomyces cerevisiae GN=CNE1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.607e-14 Identity = 63/220 (28.64%), Postives = 100/220 (45.45%), Query Frame = 2 Query: 113 WVTSDWKKDENT---AGEWNYTAGKWNGDPNDKGI--QTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVD---QKKFGGDTP-YSIMFGPDICG-------YSTKKVHAILTYNGTNKLIKKEVPCETD-QLTHVYTFLLRPDA-TYSILIDNVE-------KQSGSLYSDWDLLPPKTIQDPDPKKPEDWDRQEYIPDPE 697 W+TS+ +E + +W + G+ G DKGI +T E P ++ TLV Q+ +K + L CGG ++KL+SG ++ K + DT ++FGPD C ++ KV I + L + + TD +H+YT ++ A ++ ILID + + + + PP I D KP DWD + IPDPE Sbjct: 50 WITSEAVNNEGSKIYGAQWRLSQGRLQGSAWDKGIAVRTGNAAAMIGHLLETPINVSETDTLVVQYEIKLDNSLTCGGAFIKLMSGFMNVEALKHYAPDTEGVELVFGPDYCAPEINGVQFAINKVDKITHESKLRYLQEMPLSKLTDTSQSHLYTLIIDESAQSFQILIDGKTVMVREHIEDKKKVNFEPPITPPLMIPDVSVAKPHDWDDRIRIPDPE 269 The following BLAST results are available for this feature:
BLAST of DY260330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260330 ID=DY260330; Name=DY260330; organism=Citrus clementina; type=EST; length=1152bpback to top |