DY260335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHILO (ATP synthase subunit alpha OS=Rhizobium loti GN=atpA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.856e-28 Identity = 68/128 (53.12%), Postives = 93/128 (72.66%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSIT---PDLL------QALLGGLTNERKMELEPFLKQSA 357 AMK+V GS+K ELAQYRE+AAFAQFGSDLDAATQ LLNRG+RLTE+LKQPQ++PL E+Q+ VI+A VNG+ D++P+ ++ ++E +LS + D+L +AL L + K E++ F K A Sbjct: 382 AMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVNQVGKFEHGLLSHMRAAGKDVLDAIRKEKALSDDLRAKLKAEIDAFAKTFA 509
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_PONAB (ATP synthase subunit alpha, mitochondrial OS=Pongo abelii GN=ATP5A1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.856e-28 Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKM 327 AMK+V G++KLELAQYREVAAFAQFGSDLDAATQ LL+RG RLTE+LKQ QY+P+ IE+Q+ VIYA V G+ D++ KI ++E A LS + QALLG + + K+ Sbjct: 425 AMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQ-HQALLGTIRADGKI 532
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_PANTR (ATP synthase subunit alpha, mitochondrial OS=Pan troglodytes GN=ATP5A1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.856e-28 Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKM 327 AMK+V G++KLELAQYREVAAFAQFGSDLDAATQ LL+RG RLTE+LKQ QY+P+ IE+Q+ VIYA V G+ D++ KI ++E A LS + QALLG + + K+ Sbjct: 425 AMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQ-HQALLGTIRADGKI 532
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_HUMAN (ATP synthase subunit alpha, mitochondrial OS=Homo sapiens GN=ATP5A1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.856e-28 Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKM 327 AMK+V G++KLELAQYREVAAFAQFGSDLDAATQ LL+RG RLTE+LKQ QY+P+ IE+Q+ VIYA V G+ D++ KI ++E A LS + QALLG + + K+ Sbjct: 425 AMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQ-HQALLGTIRADGKI 532
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_SPHWW (ATP synthase subunit alpha OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.731e-28 Identity = 70/128 (54.69%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSIT---PDLLQA------LLGGLTNERKMELEPFLKQSA 357 AMKKV GS+KLELAQYRE+AAFAQFGSDLDA+TQ LLNRGARLTE+LKQPQ+ PLP E+Q+ I+A VNG+ D +P + ++E L+ + D+L A L T K LE F+K A Sbjct: 382 AMKKVAGSIKLELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFQPLPFEEQVASIFAGVNGYLDSIPTNAVTRFEAGFLAEMRSKHADVLAAIRDSKDLSADSTAALKSALEAFVKTFA 509
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_SINMW (ATP synthase subunit alpha OS=Sinorhizobium medicae (strain WSM419) GN=atpA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.731e-28 Identity = 60/89 (67.42%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMK+V GS+K ELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE+LKQPQ++PL E+Q+ VI+A VNGF D++P+ + ++E+ +LS Sbjct: 382 AMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGFLDKLPVADVGKFEQGLLS 470
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHOP2 (ATP synthase subunit alpha OS=Rhodopseudomonas palustris (strain HaA2) GN=atpA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.731e-28 Identity = 60/89 (67.42%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMKKV G +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRGARLTE+LKQPQ++PL +E+Q++VIYA VNG+ D +P+ K+ +E +LS Sbjct: 383 AMKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDALPVAKVRAFEDGLLS 471
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHISN (ATP synthase subunit alpha OS=Rhizobium sp. (strain NGR234) GN=atpA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.731e-28 Identity = 59/89 (66.29%), Postives = 78/89 (87.64%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMK+V GS+K ELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE+LKQPQ++PL E+Q+ VI+A VNG+ D++P+ ++ ++E+ +LS Sbjct: 382 AMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVNQVGKFEQGLLS 470
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHIEC (ATP synthase subunit alpha OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.731e-28 Identity = 62/107 (57.94%), Postives = 86/107 (80.37%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNER 321 AMK+V GS+K ELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE+LKQPQ++PL E+Q+ VI+A VNG+ D++P+ ++ ++E+ +LS + + A+L + E+ Sbjct: 382 AMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVAQVGKFEQGLLSYLRSE-GSAILDAIRTEK 487
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_METS4 (ATP synthase subunit alpha OS=Methylobacterium sp. (strain 4-46) GN=atpA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.731e-28 Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSIT---PDLLQAL 297 AMKKV G +K ELAQYRE+AAFAQFGSDLDAATQ LLNRG+RLTE+LKQPQ++PL +E+Q+ VIYA VNG+ D +P+ ++ +E +LS++ DLL+ + Sbjct: 382 AMKKVAGKIKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGVNGYLDAIPVNRVRAFEDGLLSTLRGRHADLLETI 483 The following BLAST results are available for this feature:
BLAST of DY260335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260335 ID=DY260335; Name=DY260335; organism=Citrus clementina; type=EST; length=1264bpback to top |