DY260335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHOP5 (ATP synthase subunit alpha OS=Rhodopseudomonas palustris (strain BisA53) GN=atpA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.085e-27 Identity = 59/89 (66.29%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMKKV G +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG+RLTE+LKQPQ++PL +E+Q++VIYA VNG+ D +P+ K+ +E +LS Sbjct: 383 AMKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDPLPVAKVRAFEDGLLS 471
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHIME (ATP synthase subunit alpha OS=Rhizobium meliloti GN=atpA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.085e-27 Identity = 59/89 (66.29%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMK+V GS+K ELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE+LKQPQ++PL E+Q+ VI+A VNG+ D++P+ + ++E +LS Sbjct: 382 AMKQVAGSIKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVSDVGKFEHGLLS 470
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_OLICO (ATP synthase subunit alpha OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=atpA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.085e-27 Identity = 62/102 (60.78%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSIT---PDLLQAL 297 AMKKV G +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRGARLTE+LKQPQ++PL +E+Q++VI+A NG+ D +PL K+ +E +LS + D+L A+ Sbjct: 383 AMKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKMEEQVVVIWAGTNGYLDALPLNKVRAFEDGLLSLLRGKHVDILNAI 484
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_METEP (ATP synthase subunit alpha OS=Methylobacterium extorquens (strain PA1) GN=atpA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.085e-27 Identity = 58/91 (63.74%), Postives = 77/91 (84.62%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSI 273 AMKKV G +K ELAQYRE+AAFAQFGSDLD +TQ LLNRGARLTE+LKQPQ++PL +E+Q+ VIYA VNG+ D++P+ K+ +E+ +L ++ Sbjct: 382 AMKKVAGKIKGELAQYREMAAFAQFGSDLDVSTQRLLNRGARLTELLKQPQFSPLKMEEQVAVIYAGVNGYLDKLPVGKVRAFEEQLLGTL 472
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_METC4 (ATP synthase subunit alpha OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.085e-27 Identity = 58/91 (63.74%), Postives = 77/91 (84.62%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSI 273 AMKKV G +K ELAQYRE+AAFAQFGSDLD +TQ LLNRGARLTE+LKQPQ++PL +E+Q+ VIYA VNG+ D++P+ K+ +E+ +L ++ Sbjct: 382 AMKKVAGKIKGELAQYREMAAFAQFGSDLDVSTQRLLNRGARLTELLKQPQFSPLKMEEQVAVIYAGVNGYLDKLPVGKVRAFEEQLLGTL 472
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_HYPNA (ATP synthase subunit alpha OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.418e-27 Identity = 59/88 (67.05%), Postives = 76/88 (86.36%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAIL 264 AMKKV GS+K ELAQYRE+AAFA+FGSDLDAATQ LLNRGARLTE+LKQPQY+PL +E+Q+++IYA G+ D++ L+ + +YEK +L Sbjct: 384 AMKKVAGSMKGELAQYREMAAFAKFGSDLDAATQRLLNRGARLTELLKQPQYSPLLMEEQVVIIYAGTRGYLDKVALKDVTRYEKELL 471
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_ERYLH (ATP synthase subunit alpha OS=Erythrobacter litoralis (strain HTCC2594) GN=atpA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.418e-27 Identity = 58/89 (65.17%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMKKV GS+KLELAQYRE+AAFAQFGSDLDA+TQ LLNRGARLTE+LKQPQ++P+P E+Q + I+A NG+ D + ++++ +YE +LS Sbjct: 382 AMKKVSGSIKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPMPFEEQTVSIFAGTNGYIDDVAVDRVTEYESQMLS 470
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_BRASO (ATP synthase subunit alpha OS=Bradyrhizobium sp. (strain ORS278) GN=atpA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.418e-27 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMKKV G +K ELAQYRE+AAFAQFGSDLDAATQ LLNRG+RLTE+LKQPQ++PL +E+Q+ VI+A NGF D +PL K+ +E +LS Sbjct: 382 AMKKVAGKIKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGTNGFLDGLPLNKVRAFEDGLLS 470
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA1_PELCD (ATP synthase subunit alpha 1/3 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpA1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.418e-27 Identity = 62/89 (69.66%), Postives = 73/89 (82.02%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS 267 AMK+V G+L+L LAQYRE+AAFAQFGSDLDAATQ L RGARL E+LKQPQY PLP+EKQILVIYAA NG+ D PL + +YE+ + S Sbjct: 374 AMKQVAGTLRLSLAQYREMAAFAQFGSDLDAATQKQLARGARLVEILKQPQYQPLPVEKQILVIYAANNGYVDDYPLTVLRRYEEELYS 462
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_ZYMMO (ATP synthase subunit alpha OS=Zymomonas mobilis GN=atpA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.851e-27 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS---SITPDLLQAL--LGGLTNERKMELEPFLKQSA 357 AMKKV GS+KLELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTE+LKQPQ+ P+P E+Q++ ++A NG+ D + + + +YE+A+LS S DLL + G ++E K +L L A Sbjct: 382 AMKKVAGSIKLELAQYREMAAFAQFGSDLDASTQKLLNRGKRLTELLKQPQFHPMPFEEQVVSLFAGTNGYIDGIEVSDVNRYEEAMLSYMRSSHNDLLATIRETGDFSDETKSKLTAALDNFA 505 The following BLAST results are available for this feature:
BLAST of DY260335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260335 ID=DY260335; Name=DY260335; organism=Citrus clementina; type=EST; length=1264bpback to top |