DY260335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_MOOTA (ATP synthase subunit alpha OS=Moorella thermoacetica (strain ATCC 39073) GN=atpA PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.200e-26 Identity = 62/120 (51.67%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKME--LEPFLKQS 354 AMK+V G L+L+LAQYRE+AAFAQFGSDLD ATQA L RG R+ E+LKQ QY P+P+E+Q++V+YAAVNGF D +P+ ++ +EK L + + + +L G+ +R+++ L+ LK+S Sbjct: 375 AMKQVAGRLRLDLAQYRELAAFAQFGSDLDKATQARLARGERMMEILKQDQYQPMPVEEQVVVLYAAVNGFLDDLPVARVRAFEKDFLRFLRNERPE-VLAGIREKRQLDDNLQEQLKKS 493
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_MARMM (ATP synthase subunit alpha OS=Maricaulis maris (strain MCS10) GN=atpA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.200e-26 Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKM 327 AMK+V G +K ELAQYRE+AAFAQFGSDLDAATQ LLNRG RLTE+LKQPQ++PL +E+Q+ VIYA G+ D++P + +YE +L + + ALL + E+K+ Sbjct: 383 AMKQVAGKMKGELAQYREMAAFAQFGSDLDAATQKLLNRGQRLTELLKQPQFSPLSMEEQVCVIYAGTRGYLDKLPTSDVQRYEADLLRHLHGE-HAALLASIRTEKKL 490
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_DESAA (ATP synthase subunit alpha OS=Desulfatibacillum alkenivorans (strain AK-01) GN=atpA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.200e-26 Identity = 61/124 (49.19%), Postives = 86/124 (69.35%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKM--ELEPFLKQSALPY 366 AMK+V G+L+++LAQ+RE+ AFA FGSDLDAATQ L RG RL ++LKQPQYAPLP+EKQ+ +++A NGF D P + +A+YE + S + A +G + ERK+ E + LK++ Y Sbjct: 374 AMKQVAGTLRMDLAQFRELEAFAAFGSDLDAATQKQLKRGERLVQILKQPQYAPLPLEKQVAILFAGANGFLDAFPADSMAKYEAGMYSFLESKYPDA-MGAIAKERKISDETDALLKKALEEY 496
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA1_RHOS1 (ATP synthase subunit alpha 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpA1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.200e-26 Identity = 60/112 (53.57%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKMELE 336 AMK V G +KLELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE++KQPQYAPL + + VI+A G+ D++P++ + ++E+ +L + + L N+RK++ E Sbjct: 384 AMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIFAGTKGYLDKVPVKDVGRWEQGLLKHLRTNAKDLLADITNNDRKVKGE 495
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHORU (ATP synthase subunit alpha OS=Rhodospirillum rubrum GN=atpA PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.674e-26 Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSIT---PDLLQALLGG--LTNERKMELEPFL 345 AMK+V GS+KLELAQYRE+AAFAQF SDLD ATQ LL RGARLTE+LKQ QY+PL +E+Q+ VIYA G+ D++ + +YE ++L ++ DLL+++ G L+ E + +L FL Sbjct: 383 AMKQVAGSIKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQAQYSPLAVEEQVCVIYAGTRGYLDKLKTTDVVRYEASLLGALRTSGADLLESIRTGKALSKEIEQKLVKFL 502
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHORT (ATP synthase subunit alpha OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.674e-26 Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSIT---PDLLQALLGG--LTNERKMELEPFL 345 AMK+V GS+KLELAQYRE+AAFAQF SDLD ATQ LL RGARLTE+LKQ QY+PL +E+Q+ VIYA G+ D++ + +YE ++L ++ DLL+++ G L+ E + +L FL Sbjct: 383 AMKQVAGSIKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQAQYSPLAVEEQVCVIYAGTRGYLDKLKTTDVVRYEASLLGALRTSGADLLESIRTGKALSKEIEQKLVKFL 502
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_CAEEL (ATP synthase subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=H28O16.1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.492e-26 Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNE 318 AMK+V GS+KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIYA V G+ D++ I ++EK L+ + QALL + E Sbjct: 410 AMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSS-QQALLKTIREE 514
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_RHOCA (ATP synthase subunit alpha OS=Rhodobacter capsulatus GN=atpA PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 4.560e-26 Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILS---SITPDLLQAL 297 +MK V G +KLELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE++KQPQY+PL + + VI+A NGF D +P++++ ++EK +L+ S D+L+ L Sbjct: 381 SMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVAVIFAGTNGFLDAVPVKEVGRFEKGLLAYLRSTRKDVLEWL 482
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_PARDP (ATP synthase subunit alpha OS=Paracoccus denitrificans (strain Pd 1222) GN=atpA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.560e-26 Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQALLGGLTNERKM--ELEPFLK 348 AMK V G +KLELAQYRE+AAFAQFGSDLDAATQ LLNRGARLTE++KQPQY+PL + ++VIYA G+ D +P+ + ++E +L + L N+RK+ ELE +K Sbjct: 383 AMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVIVIYAGTKGYLDGIPVRDVTKWEHGLLQYLRNQKADLLEDMTKNDRKVAGELEDAIK 500
BLAST of DY260335 vs. ExPASy Swiss-Prot
Match: ATPA_CARHZ (ATP synthase subunit alpha OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 5.956e-26 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 AMKKVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLEKIAQYEKAILSSITPDLLQ---------ALLGGLTNERKMELEPFLKQSA 357 AMK+V GSL+L+LAQYRE+AAFAQFGSDLD AT A L RG RL E+LKQ QY P+P+E+Q++ I+AAVNG+ D +P+EK+ +E L + + Q L LT+ K +E F K A Sbjct: 374 AMKQVAGSLRLDLAQYRELAAFAQFGSDLDKATLARLTRGERLVELLKQDQYKPMPVEEQVMAIFAAVNGYLDDLPVEKVRPFEAEFLKFMRANYPQIGEEIRTKGVLTDELTSRLKSAIEEFKKTFA 501 The following BLAST results are available for this feature:
BLAST of DY260335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260335 ID=DY260335; Name=DY260335; organism=Citrus clementina; type=EST; length=1264bpback to top |