DY260336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 6.007e-34 Identity = 82/162 (50.62%), Postives = 101/162 (62.35%), Query Frame = 2 Query: 119 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQP-----------------TGTAGPGGMMIGRP 544 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QP T T PG ++I +P Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEDVRQSVTPAEPVQYYFTLAQQPAAVQVQGQQQGQQTTSSTTTIQPGQIIIAQP 183
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC_DICDI (Nuclear transcription factor Y subunit gamma OS=Dictyostelium discoideum GN=nfyc-1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.748e-33 Identity = 66/101 (65.35%), Postives = 84/101 (83.17%), Query Frame = 2 Query: 119 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 421 FWS Q ++I + DFK H+LPLARIKKIMK+D+DV IS+EAPILFAKACE+ ILE+T RSW+H E NKRRTLQ+ DI +++R + FDFL+D++PRDEIK Sbjct: 252 FWSSQLRDIHKTEDFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHTEMNKRRTLQRTDIINSLSRCETFDFLIDMLPRDEIK 352
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC8_ARATH (Nuclear transcription factor Y subunit C-8 OS=Arabidopsis thaliana GN=NFYC8 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 7.343e-32 Identity = 79/163 (48.47%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 119 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVY-VQPPSQAWQSVW 604 FWS +E+E DFKNH LP+ RIKKIMK D DV MI++EAPIL +KACE+FI++LT+RSWLHA+E+KR TLQK+++ AA+ +T IFDFL+D E+K E+ A+ P PP+ P GM+IG P G++ QP QAW W Sbjct: 21 FWS---KEMEGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD--DDIEVKRES--------VAAAADPVAMPPIDD---GELPPGMVIGTPVCCSLGIHQPQPQMQAWPGAW 167
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: HAP5_YEAST (Transcriptional activator HAP5 OS=Saccharomyces cerevisiae GN=HAP5 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.060e-30 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 2 Query: 119 FWSYQRQEIEQAN--------DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 409 +W EIE N DFK+H LP ARI+K+MK DEDV+MISAEAPI+FAKACE+FI ELT+R+W AE NKRRTLQK DIA A+ ++D+FDFL+D+VPR Sbjct: 133 YWQELINEIESTNEPGSEHQDDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSDMFDFLIDVVPR 237
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC7_ARATH (Nuclear transcription factor Y subunit C-7 OS=Arabidopsis thaliana GN=NFYC7 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.585e-26 Identity = 70/168 (41.67%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 125 SYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ------KNDIAAAITRTDIFDFLVDIVPRDE--IKDEAAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPS-QAWQSV 601 +Y ++ A D K+H PL RIKKIMK++ +V M++AEAP+L +KACE+ IL+LT+RSWLH E R+TL+ ++DI+AA TR+ F FL D+VPRD + D+ P+ P G P G +IG P D GVY PP Q W +V Sbjct: 47 NYWIAQMGNATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRDPSVVTDD--------------------PVLHPDGEVLPPGTVIGYPVFDCNGVYASPPQMQEWPAV 194
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: HAP5_SCHPO (Transcriptional activator hap5 OS=Schizosaccharomyces pombe GN=hap5 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.703e-26 Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 2 Query: 164 KNHQLPLARIKKIMKADEDVR--MISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA------------AGLGGMVG----ATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQ 595 K LPLARIKK+MK D+DV+ MISAEAP LFAK E+FI ELT+R+WLHA++N+RRTLQ++DIA A+++++++DFL+DI+ +D A A +GGM G T +G+P PM PTG+ P + + P+ Y PS+ Q Sbjct: 105 KTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDIISKDNNNSRASSSQAHMSATQVAAMGGMNGLQPFPTQAGLPNQGFPM--PTGSQLP---FSNQQSSQPSMQYSSHPSRMQQ 261
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC5_ARATH (Nuclear transcription factor Y subunit C-5 OS=Arabidopsis thaliana GN=NFYC5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.864e-26 Identity = 69/162 (42.59%), Postives = 97/162 (59.88%), Query Frame = 2 Query: 119 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGATASGVPYYYPPMGQP--TGTAGPGGMMIGRPAVDPTGVYVQPPSQ--AW 592 FWS + +E + KNH+ P++RIK+IMK D DV MI+AEAP L +KACE+F+++LT+RSWLHA+E+ R T++K+D+ A +++T IFDFL D VP+DE G V A A V + P P G +IG P G++ P AW Sbjct: 21 FWS---KGMEGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKDE--------GEPVVAAADPVDDVADHVAVPDLNNEELPPGTVIGTPVCYGLGIHAPHPQMPGAW 171
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYCA_ARATH (Nuclear transcription factor Y subunit C-10 OS=Arabidopsis thaliana GN=NFYC10 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.216e-18 Identity = 42/97 (43.30%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 116 MFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 406 +FW+ QR+++ N LPL+R++KI+K+D +V+ IS + P LF+KACE FILE+T+R+W+H + R T+++ DI A+ + +DFL+D VP Sbjct: 50 VFWNNQREQL--GNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVP 144 The following BLAST results are available for this feature:
BLAST of DY260336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260336 ID=DY260336; Name=DY260336; organism=Citrus clementina; type=EST; length=1049bpback to top |