DY260343

Overview
NameDY260343
Unique NameDY260343
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1048
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN1_BOVIN (Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.597e-48
Identity = 95/170 (55.88%), Postives = 130/170 (76.47%), Query Frame = 2
Query:   68 MASLYK-----GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRT 562
            MAS Y+       S+K K+ G    L++++KQE++EAF+LFD DGSGTID KEL VAMRALGFE  +E++ +MIADVDK+G+G I  ++F  +MT K+ E+D+KEE++KAF + D D  GKIS  ++KR+A+ELG N TD E+ EM++EADRD DGEVN DEF+R+MK+T
Sbjct:    1 MASSYRKPTVASTSQKRKV-GPKPELTEEQKQEVREAFDLFDADGSGTIDVKELKVAMRALGFEPRKEEMKRMIADVDKEGTGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEDEFLRIMKKT 169          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN1_HUMAN (Centrin-1 OS=Homo sapiens GN=CETN1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.167e-45
Identity = 84/146 (57.53%), Postives = 119/146 (81.51%), Query Frame = 2
Query:  128 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 565
            L++ +KQE++EAF+LFD DGSGTIDAKEL VAMRALGFE  +E++ +MI++VD++G+G I  ++F  +MT K+ E+D+KEE++KAF + D D  GKIS  ++KR+A ELG N TD E+ EM++EADRD DGEVN +EF+R+MK+T+
Sbjct:   25 LTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTS 170          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN2_MOUSE (Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.792e-45
Identity = 83/146 (56.85%), Postives = 118/146 (80.82%), Query Frame = 2
Query:  128 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 565
            L++ +KQEI+EAF+LFD DG+GTID KEL VAMRALGFE  +E+I +MI+++DK+G+G ++  +F  +MT K+ E+D+KEE++KAF + D D  GKIS  ++KR+A+ELG N TD E+ EM++EADRD DGEVN  EF+R+MK+T+
Sbjct:   25 LTEDQKQEIREAFDLFDADGTGTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTS 170          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN2_BOVIN (Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 7.564e-45
Identity = 82/146 (56.16%), Postives = 119/146 (81.51%), Query Frame = 2
Query:  128 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 565
            L++++KQEI+EAF+LFD DG+GTID KEL VAMRALGFE  +E+I +MI+++DK+G+G ++  +F  +MT K+ E+D+KEE++KAF + D D  GKIS  ++KR+A+ELG N +D E+ EM++EADRD DGEVN  EF+R+MK+T+
Sbjct:   25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLSDEELQEMIDEADRDGDGEVNEQEFLRIMKKTS 170          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN2_HUMAN (Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.290e-44
Identity = 82/146 (56.16%), Postives = 119/146 (81.51%), Query Frame = 2
Query:  128 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 565
            L++++KQEI+EAF+LFD DG+GTID KEL VAMRALGFE  +E+I +MI+++DK+G+G ++  +F  +MT K+ E+D+KEE++KAF + D D  GKIS  ++KR+A+ELG N TD E+ EM++EADRD DGEV+  EF+R+MK+T+
Sbjct:   25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTS 170          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN1_MOUSE (Centrin-1 OS=Mus musculus GN=Cetn1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.903e-44
Identity = 88/170 (51.76%), Postives = 127/170 (74.71%), Query Frame = 2
Query:   68 MASLYK-----GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRT 562
            MAS ++       S K K+ G    L++ +KQE++EAF+LFD+DGSGTID KEL VAMRALGFE  +E++ +MI++VDK+ +G I  ++F  +MT K+ E+D+KEE++KAF + D D  GKIS  ++KR+A ELG + TD E+ EM++EADRD DGEVN +EF+++MK+T
Sbjct:    1 MASTFRKSNVASTSYKRKV-GPKPELTEDQKQEVREAFDLFDSDGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEFLKIMKKT 169          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CATR_NAEGR (Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.744e-41
Identity = 79/145 (54.48%), Postives = 117/145 (80.69%), Query Frame = 2
Query:  128 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRT 562
            L+ +++QEIKEAF+LFD DGSG IDAKEL VAMRALGFE  +E+I +MI+ +D +GSG ID ++F  +MTAK+ E+DS  E+MKAF + D+D++G I+  ++KR+A++LG N TD E+ EM+EEADR + G+++ ++F+R+MK+T
Sbjct:   26 LTDEQRQEIKEAFDLFDMDGSGKIDAKELKVAMRALGFEPKKEEIKKMISGID-NGSGKIDFNDFLQLMTAKMSEKDSHAEIMKAFRLFDEDDSGFITFANLKRVAKDLGENMTDEELREMIEEADRSNQGQISKEDFLRIMKKT 169          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN3_MOUSE (Centrin-3 OS=Mus musculus GN=Cetn3 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.867e-35
Identity = 71/148 (47.97%), Postives = 106/148 (71.62%), Query Frame = 2
Query:  110 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 553
            R +   LS+++KQEIK+AFELFDTD    ID  EL VAMRALGF++ +  + +++ D D++ +G I  ++F  ++T  I ERD  EE++KAF + D D++GKIS  +++R+ARELG N +D E+  M+EE D+D DGE+N +EFI +M
Sbjct:   16 RKKRRELSEEQKQEIKDAFELFDTDKDQAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CETN3_HUMAN (Centrin-3 OS=Homo sapiens GN=CETN3 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.867e-35
Identity = 71/148 (47.97%), Postives = 106/148 (71.62%), Query Frame = 2
Query:  110 RGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 553
            R +   LS+++KQEIK+AFELFDTD    ID  EL VAMRALGF++ +  + +++ D D++ +G I  ++F  ++T  I ERD  EE++KAF + D D++GKIS  +++R+ARELG N +D E+  M+EE D+D DGE+N +EFI +M
Sbjct:   16 RKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163          
BLAST of DY260343 vs. ExPASy Swiss-Prot
Match: CATR4_PARTE (Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1d PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.867e-35
Identity = 71/148 (47.97%), Postives = 103/148 (69.59%), Query Frame = 2
Query:  125 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTF 568
            GL++++  EIKEAF+LFDTDG+ +ID KEL  AM +LGFE   + I QMI+D+D DGSG ID  EF  +MTA+I ERDSK ++ K F++ D +  G I+  D++++A+ELG    D E+ EM++ AD D D +V  ++F  +M + TF
Sbjct:   33 GLTEEEVLEIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMTKKTF 180          
The following BLAST results are available for this feature:
BLAST of DY260343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
CETN1_BOVIN5.597e-4855.88Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1[more]
CETN1_HUMAN1.167e-4557.53Centrin-1 OS=Homo sapiens GN=CETN1 PE=2 SV=1[more]
CETN2_MOUSE5.792e-4556.85Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1[more]
CETN2_BOVIN7.564e-4556.16Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1[more]
CETN2_HUMAN1.290e-4456.16Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1[more]
CETN1_MOUSE4.903e-4451.76Centrin-1 OS=Mus musculus GN=Cetn1 PE=2 SV=1[more]
CATR_NAEGR1.744e-4154.48Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1[more]
CETN3_MOUSE1.867e-3547.97Centrin-3 OS=Mus musculus GN=Cetn3 PE=2 SV=1[more]
CETN3_HUMAN1.867e-3547.97Centrin-3 OS=Homo sapiens GN=CETN3 PE=2 SV=2[more]
CATR4_PARTE1.867e-3547.97Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YD08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260343 ID=DY260343; Name=DY260343; organism=Citrus clementina; type=EST; length=1048bp
TTCCTTTCCTTTACTTTGCGGTCTTTTTTTGAAACGCTTTGCGATCTAAT
CGACCAGGGCAAAGGCAATGGCTAGTCTTTATAAAGGGGTTTCTAGGAAA
GATAAAATCAGAGGACGTCATCATGGGCTATCACAACAGAAGAAGCAAGA
GATTAAGGAAGCATTTGAACTTTTTGACACCGATGGCTCAGGCACTATTG
ATGCCAAAGAGCTGAATGTCGCTATGAGGGCCCTTGGTTTTGAGATGACC
GAAGAGCAAATCAATCAAATGATTGCAGATGTCGACAAGGATGGAAGTGG
TGCCATTGATTTAGATGAATTTGAACATATGATGACGGCTAAGATTGGAG
AAAGGGATTCTAAGGAAGAGCTCATGAAAGCATTCCATATCATTGACCAA
GATAACAATGGAAAGATATCAGCTGGAGATATTAAGCGTATTGCGAGGGA
GCTGGGTGTAAACTTCACTGACCGAGAGATTCATGAGATGGTAGAGGAAG
CAGACAGAGATCATGATGGAGAAGTAAACGCTGATGAGTTTATCCGTATG
ATGAAGAGGACCACATTCGGGTACTAGAGATCCATAAGGATGAAGAAGGG
TTGTTGATGCATGGTAGCTGTAGTATATACTTTGTGCCAAGTTGAAAGGA
AAATAATCATGGATTGATAAGTGATGGTTCATTGTTTTGGCTAAATTTTA
TGCCTGCAAATTTATTAATAATGTACCTGTCTTTTGTTATTTAATGATCT
GGGTAGGTCTAAGGATAAATTGGGAAATGCTCCCAGATCCTGTTAAATCA
AAAATGCCTAAGGTTCCTGCCGGATTGCCATTCCTGGACGTCCCTGAATT
CAGGAAATATTGGGCCTGATTTCCACCCAAAATTGACGGTAAAAAGGGCA
AAGCCAAAACCCCTTTCCCAAACCACCCAAAAAAAATTGGGAGGGAATCC
AAACCCCCCAACCTAAAAAAAATTTTTGGAAAAAAACCTTGTATTCCCCA
AAACGTTTTTTGGGGAAACTTGAAAACCCCAAACCCCTCTTTTCCTAT
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