DY260354

Overview
NameDY260354
Unique NameDY260354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length997
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY260354 vs. ExPASy Swiss-Prot
Match: EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF118 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.296e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 2 
Query:  353 GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYD 469
            G+RQR WGKWAAEIRDP K  R WLGTF+T EEAA+AYD
Sbjct:  115 GVRQRKWGKWAAEIRDPIKKTRTWLGTFDTLEEAAKAYD 153
[Close]
BLAST of DY260354 vs. ExPASy Swiss-Prot
Match: DRE1G_ORYSJ (Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. japonica GN=DREB1G PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.916e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 2 
Query:  320 KPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTVTP 547
            K K  R  +++G+R+R  G+W  E+R+P    R+WLGTF TAE AARA+D  A  +RG+ A +NF +      V P
Sbjct:   46 KFKETRHPVFKGVRRRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFADSPRRLRVPP 121
[Close]
BLAST of DY260354 vs. ExPASy Swiss-Prot
Match: DRE1G_ORYSI (Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. indica GN=DREB1G PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.916e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 2 
Query:  320 KPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTVTP 547
            K K  R  +++G+R+R  G+W  E+R+P    R+WLGTF TAE AARA+D  A  +RG+ A +NF +      V P
Sbjct:   46 KFKETRHPVFKGVRRRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFADSPRRLRVPP 121
[Close]
BLAST of DY260354 vs. ExPASy Swiss-Prot
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.114e-11
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 2 
Query:  326 KRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPN 520
            +R++  +YRGIR R  GKW +EIR+P+K  RVWLGT+ T E AA AYD  A  ++G    +NFP+
Sbjct:   83 RRKKNPVYRGIRCRS-GKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFPD 146
The following BLAST results are available for this feature:
BLAST of DY260354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
EF118_ARATH2.296e-1176.92Ethylene-responsive transcription factor ERF118 OS... [more]
DRE1G_ORYSJ3.916e-1143.42Dehydration-responsive element-binding protein 1G ... [more]
DRE1G_ORYSI3.916e-1143.42Dehydration-responsive element-binding protein 1G ... [more]
ERF26_ARATH5.114e-1150.77Ethylene-responsive transcription factor ERF026 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YD20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260354 ID=DY260354; Name=DY260354; organism=Citrus clementina; type=EST; length=997bp
CGCATCTTCTTTTCTCTTACTAATCGCCAAAACCACAGCCTGACCTGATC
GCTAGTTTAGTTTCAGTGCTTTATTATTACATTTACTTGCGGAAAGAATG
TGTGGCGGTTCTATCTTAGGAGACTTCTTTCCTCGCCACGGCGGCAGCCG
CGTCACCGCTTCCGACCTCTGGCCCAACTCACCCTTCGCTGCTACTAAAC
AACTCCCTCACAACTTTGAATCTACTCCGTTCTCCGATGAACACCAGTCA
CTGGCCAAAATCAAACGCCCTCAACCCCCTTCATATCTAAACTCCTGTTC
AGCTTCAGGTGATGAGAAAAAGCCCAAGAGGCAGAGGAAGAATCTCTACA
GGGGAATAAGGCAACGCCCCTGGGGCAAATGGGCAGCTGAGATTCGTGAC
CCAAGGAAAGGAGTTCGAGTCTGGCTCGGCACATTCAACACTGCCGAAGA
AGCAGCTCGAGCCTATGACAAAGAAGCCCGCAAGATTCGCGGCAAGAAAG
CCAAAGTCAACTTCCCCAACGAAGAGGACGTCTTCACCGTCACCCCTGCT
GCTGCCGCCCATGCTTACCATCATCATCAGCATAATCATAATCCCACTCC
CAGTCCCCTTCCTTCTCTTTCCCAAGAAGATCTTTTTAGTCGTAATAACT
CATCTATAAGTAGTGTTGGGTTTGGCTTGTATGGTTATGATCTGAACCCC
CCGATTGTACTTCTGGTGGTGACGAAAATTTCCGGGACTGGTTCTGGGTC
TGTTTCCAAAGGTGGGTACCAATCCACAGAAACTATGCTGAATTGCAACC
CGAAAGTCCATGAAGGGTCGTTTGCCTCCAATGAAGGGAAAGCCCAAAAA
ACAAAAAAAAAAAAAAAACCAAAACCCTAAAAAAGAAAAAAAACAAAGTG
CCAAAAACCTTCCGAAGGAACTTATGGGCTAACAAAAAATTTCCAGGAAT
TTTCATCCCCCTTTCCCTAATCCCCATGGGGCACACCCCCCCTTTGC
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