DY260358

Overview
NameDY260358
Unique NameDY260358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.559e-54
Identity = 118/214 (55.14%), Postives = 140/214 (65.42%), Query Frame = 3
Query:  123 RESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            ++ +  G  A     KDYT+PPPAPL +  EL+ WS YRA IAEF+AT LFLYITV TV+G         S   + C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCLGAICG  +VKG Q + Y   GGGA  LS  +SKG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:    3 KDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSAR-----DSHVPVLAPLP 211          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.559e-54
Identity = 118/208 (56.73%), Postives = 137/208 (65.87%), Query Frame = 3
Query:  141 GTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            G  A     KDYT+PPPAPL +  EL+ WS YRA IAEF+AT LFLYITV TV+G         S   + C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCLGAICG  +VKG Q + Y   GGGA  LS  +SKG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   10 GPEAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSAR-----DSHVPVLAPLP 212          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.342e-54
Identity = 115/208 (55.29%), Postives = 138/208 (66.35%), Query Frame = 3
Query:  141 GTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            G AA     KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VK  Q + +   GGGA  L+  +SKG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   10 GGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 212          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 5.701e-54
Identity = 119/227 (52.42%), Postives = 142/227 (62.56%), Query Frame = 3
Query:   84 GKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            GKE DV  G                  V+DY +PPPAPL +  EL  WS YRA IAEFVAT LFLY+TV TV+G         S   + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+CG A+VKG Q S Y+  GGGA  L+  +SKG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:    2 GKEADVEAGG-----------------VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 206          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 9.725e-54
Identity = 112/193 (58.03%), Postives = 134/193 (69.43%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDYT+PPPAPLF+ GEL  WSFYRA IAEF+AT LFLYITV TV+G  V  S  +C  VG  GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+S+ RAV Y++ QCLG I G  +VKG+ K QY   GGGA +++  +S G     +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 202          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.270e-53
Identity = 115/206 (55.83%), Postives = 138/206 (66.99%), Query Frame = 3
Query:  147 AAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            AA   + KDY++PPPAPL +  EL+ WS YRA IAEFVAT LFLYITV TV+G         S   + C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VKG Q + Y   GGGA  LS  +SKG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:    7 AAAAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 207          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 1.270e-53
Identity = 111/199 (55.78%), Postives = 136/199 (68.34%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG  +VK  Q + ++  GGGA  L+  +S+G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 212          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.830e-53
Identity = 109/191 (57.07%), Postives = 130/191 (68.06%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLY+TV TV+G       C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG  +VK    + Y+ LGGGA  ++  +S G     +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   13 KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSAR-----DSHVPVLAPLP 198          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 8.233e-53
Identity = 114/199 (57.29%), Postives = 136/199 (68.34%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDY++PPPAPL +  EL+ WS YRA IAEFVAT LFLYITV TV+G         + + + CS VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGLFLARK+SL RAV Y++ Q LGAICG  +VKG Q + Y   GGGA  LS  +SKG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   19 KDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 212          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 8.233e-53
Identity = 109/201 (54.23%), Postives = 135/201 (67.16%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK----------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDYT+PPPAPL +  EL SWS YRA IAEF+AT LFLY+TV TV+G             + + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YM+ QCLGA+CG  +VK  Q + ++  GGGA  L+  +S+G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 214          
The following BLAST results are available for this feature:
BLAST of DY260358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
PIP24_MAIZE2.559e-5455.14Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE2.559e-5456.73Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP21_ORYSJ3.342e-5455.29Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP25_ORYSJ5.701e-5452.42Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP26_ORYSJ9.725e-5458.03Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE1.270e-5355.83Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_MAIZE1.270e-5355.78Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP28_ARATH2.830e-5357.07Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP23_ORYSJ8.233e-5357.29Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP22_MAIZE8.233e-5354.23Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YD24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260358 ID=DY260358; Name=DY260358; organism=Citrus clementina; type=EST; length=1113bp
CGTTGTGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCTATC
TTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGT
AAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGG
CTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTC
TTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGC
GGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGA
TGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGC
ATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGC
TGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCT
TGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAG
TGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCCTTCAGAAAAG
CCAATATGAAATGCTAGGCGGCGGTGCCCAACTGCTCAGCAAAAGGCACA
GCAAGGGAAATGGCCCTTGGACCCAAGATTGTTGGTACCCTTTGGTCTTG
TTTACACGGCCCTCCCCGCCCCGGGAAGCCAAACCGCAACGCCCCGCGAA
TTCCCATGTTCCAATACTGGGCCGCCCTCCCCACCGCATCTTGCCTTGGC
TTATGTCTCGAACCTGCCCAACAAATCACAATCCCCAGAACAACGCTCAT
ACCTCCCCTAAGCGACTCTGGTCCCCACTCCCCCCACAGAACAAAAAGAG
AAGCCCCGGGAACTGCTCGTTAATCTTTTCTTTCACATGGCGTATTCCCT
CCCACCCAGACCCCCCCCCCCCCCACCCACCACACCACTCCCACTCAGGG
AGCCCCCCCATTCCAACTCCACACACCACACATTCTAACTCATCCAAATC
ACCCTACATTATTCACCTTTAGACAAAAATCAAAGACCATAGTCAACCCC
TCATCACCCCCGAACGCCACCACCAAATATCCTCCTCCTGTTAATACCCT
ACCATCTTCACCC
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