DY260358

Overview
NameDY260358
Unique NameDY260358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 1.075e-52
Identity = 114/197 (57.87%), Postives = 134/197 (68.02%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVS-KSKSK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            +DY +PPP P F+  EL+ WS YRA IAEFVAT LFLYITVLTV+G   +S +K     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG   VK  Q S Y+  GGGA  L+  ++ G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   14 RDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 205          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.395e-52
Identity = 109/197 (55.33%), Postives = 134/197 (68.02%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDY +PPP PLF+  EL  WSFYRA IAEF+AT LFLY+T++TV+G         +  +C+ VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK++L RAV YM+ QCLGAICG A+VK  Q + +   GGGA  LS  +S G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   15 KDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSAR-----DSHVPVLAPLP 206          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 3.128e-52
Identity = 113/197 (57.36%), Postives = 133/197 (67.51%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVS-KSKSK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            +DY +PPP P F+  EL+ WS YRA IAEFVAT LFLY+TVLTV+G   +S +K     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG   VK  Q S Y   GGGA  L+  ++ G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   14 RDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 205          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 5.336e-52
Identity = 111/199 (55.78%), Postives = 134/199 (67.34%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            +DY +PPPAPL +  EL  WS YRA IAEFVAT LFLY+TV TV+G        V+ + + C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVT GLFLARK+SL RA+ YM  QCLGAICG A+VKG Q S Y+  GGGA  L+  +S G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   16 RDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 209          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 5.336e-52
Identity = 113/197 (57.36%), Postives = 129/197 (65.48%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK------CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            +DY +PPPAP  +  EL  WSFYRA IAEFVAT LFLYITVLTV+G             C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCLGAICG   VK  Q S Y   GGGA  L+  +S G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSAR-----DSHVPVLAPLP 207          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.648e-51
Identity = 114/199 (57.29%), Postives = 131/199 (65.83%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            +DY +PPPAPL +  EL  WS YRA IAEFVAT LFLYITV TV+G         S   + CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YM  Q LGAICG A+VKG Q   Y   GGGA  +S  +S G G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   18 RDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 211          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.517e-51
Identity = 108/205 (52.68%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  144 TAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            T  ++   KDY +PPP   FE  EL  WSFYRA IAEF+AT LFLY+TVLTV+G      ++     C++VG+ GI+WAFGGMIF LVYCTAGISGGHINPAVTFGLFLA K+SL RAV YM+ QCLGA CG  +VK  Q + Y   GGGA +LS  ++ G G   +    + LV  +F+   P R A+     +SH+P+L   P
Sbjct:    7 TEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNAR-----DSHIPVLAPLP 206          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.995e-50
Identity = 107/197 (54.31%), Postives = 127/197 (64.47%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK------CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            +DY +PPPAP F+  EL  W  YRA IAEFVAT LFLY+++LTV+G             C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARK+SL R V Y++ QCLGAICG   VK  Q S Y   GGGA  L+  ++KG G   +    + LV  +F+   P R A+     +SHVP+L   P
Sbjct:   16 RDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNAR-----DSHVPVLAPLP 207          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 2.401e-44
Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 3
Query:  174 YTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK---CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQKSQYEMLGGGAQLLSKRHSKGNGPWTQDCWYPLVLFTRPSPPREAKPQRPA-NSHVPIL 719
            Y +PPPAPL +  EL  WS YRA IAEF+AT +FLY+++ TV+G    ++    C+ VG  G+AW+FG  IF LVYCT G+SGGHINPAVT GLF  RKLSL R V Y++ QCLGAI GA +VKG+ K  Y+ LGGGA  +S  +S       +     ++++T  S      P+R A +S +P+L
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFS---ATDPKRTARDSFIPVL 205          
BLAST of DY260358 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.654e-43
Identity = 97/192 (50.52%), Postives = 125/192 (65.10%), Query Frame = 3
Query:  168 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGLQ-KSQYEMLGGGAQLLSKRHSKGNGPWTQDC-WYPLV--LFTRPSPPREAKPQRPANSHVPILGRPP 731
            KDY +PPPAPL + GEL  WS YRA IAEF AT L + I+V TV+G  K +S     G+ GIAWAFGG+IF LVYCTAGISGGH+NPAVTF + LAR++SL RA  Y + QC+GA+CGA + + +    QY   GGGA  L+  +S G G   +    + LV  +F+   P R+A+     +SHVP+L   P
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIG-EKRQSGEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKAR-----DSHVPVLAPLP 197          
The following BLAST results are available for this feature:
BLAST of DY260358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
PIP22_ARATH1.075e-5257.87Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP25_ARATH2.395e-5255.33Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH3.128e-5257.36Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP24_ORYSJ5.336e-5255.78Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP21_ARATH5.336e-5257.36Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP26_MAIZE2.648e-5157.29Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP26_ARATH4.517e-5152.68Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP24_ARATH4.995e-5054.31Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ2.401e-4448.92Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ2.654e-4350.52Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YD24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260358 ID=DY260358; Name=DY260358; organism=Citrus clementina; type=EST; length=1113bp
CGTTGTGCCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACCTATC
TTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGT
AAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGG
CTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTC
TTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGC
GGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGA
TGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGC
ATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGC
TGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCT
TGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAG
TGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCCTTCAGAAAAG
CCAATATGAAATGCTAGGCGGCGGTGCCCAACTGCTCAGCAAAAGGCACA
GCAAGGGAAATGGCCCTTGGACCCAAGATTGTTGGTACCCTTTGGTCTTG
TTTACACGGCCCTCCCCGCCCCGGGAAGCCAAACCGCAACGCCCCGCGAA
TTCCCATGTTCCAATACTGGGCCGCCCTCCCCACCGCATCTTGCCTTGGC
TTATGTCTCGAACCTGCCCAACAAATCACAATCCCCAGAACAACGCTCAT
ACCTCCCCTAAGCGACTCTGGTCCCCACTCCCCCCACAGAACAAAAAGAG
AAGCCCCGGGAACTGCTCGTTAATCTTTTCTTTCACATGGCGTATTCCCT
CCCACCCAGACCCCCCCCCCCCCCACCCACCACACCACTCCCACTCAGGG
AGCCCCCCCATTCCAACTCCACACACCACACATTCTAACTCATCCAAATC
ACCCTACATTATTCACCTTTAGACAAAAATCAAAGACCATAGTCAACCCC
TCATCACCCCCGAACGCCACCACCAAATATCCTCCTCCTGTTAATACCCT
ACCATCTTCACCC
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